KEGG   Haliotis rubra (blacklip abalone): 124253513
Entry
124253513         CDS       T07967                                 
Name
(RefSeq) LOW QUALITY PROTEIN: DNA polymerase epsilon catalytic subunit A-like
  KO
K02324  DNA polymerase epsilon subunit 1 [EC:2.7.7.7]
Organism
hrj  Haliotis rubra (blacklip abalone)
Pathway
hrj03030  DNA replication
hrj03410  Base excision repair
hrj03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hrj00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    124253513
   03410 Base excision repair
    124253513
   03420 Nucleotide excision repair
    124253513
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hrj03032]
    124253513
   03400 DNA repair and recombination proteins [BR:hrj03400]
    124253513
Enzymes [BR:hrj01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     124253513
DNA replication proteins [BR:hrj03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   DNA polymerase epsilon complex
    124253513
DNA repair and recombination proteins [BR:hrj03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     DNA polymerase epsilon complex
      124253513
SSDB
Motif
Pfam: DUF1744 DNA_pol_B_exo1 DNA_pol_B DNA_pol_B_exo2 RNase_H_2 Nup153 Cytochrom_CIII
Other DBs
NCBI-GeneID: 124253513
NCBI-ProteinID: XP_046543265
LinkDB
Position
Unknown
AA seq 2274 aa
MVLQNSGRFKNERGQGSGESTGREDSTEKRLSRATLNDEIDVRFGFDRYKDPQEKTGWLI
NMHPTDVLDEDKRLVSAVDYYFIQEDGSRFKVTLPFKAYFYVATKQDCEREVASFLTRKF
SGKIATIESVVKEDLDLHNHLVGLKHKYLKLSFLSVEDLMKVKREIFPAVRKNKEREKQN
EAYTAMLTSHLTGEDGVSKKIADQMDNIIDIREYDVPYHVRVSIDLKIFVGHWYSLRGRG
GAPPEIRQREDLVDRPDPVVLAYDIETTKLPLKFPDAQIDQIMMISYMIDGQGYLICNRE
IVSQDVEDFEYTPRPEFEGPFIVFNEPDEVSLIRKFFEHFQEVRPQICVTYNGDFFDWPF
VEARAAAHDMDMFREIGFQKDNQGEYKSRHSIHMDCFRWVKRDSYLPVGSQNLKAVAKAK
LCYDPVELDPEEMCRMASEEPQVLANYSVSDAVATYYLYVKYVHPFIFALCTIIPMEPDE
VLRKGSGTLCEALLMVQAYHANIVFPNKQESVLNKLTEDGHVLDSETYVGGHVEALESGV
FRSDIPCRFRMVPEAFQTLIDSVERTMKHAIEVEEKIPLNTVTNFDEVCSDIAEKLEMLR
DCPNRLENPIIYHLDVDAMYPNIILTNRLQPPAIVDXVTCAACDFNKPEALCQRKMPWMW
RESSVMPSRNEFHRIQQQLEKREXSPYFPGEPRALHELPKEEQAAIEKKRLAEYCRKYKK
TKITRMEERTATICQRENSFRGHRVXSFRDRRYEFKGLTKVWKKKLSEAEAKKDAVEAVG
NSAWWCCNDSLQLAHKCILNSFYGYVMRKGARWYSMEMAGIVCFTGXNIIKSQEIVEQIG
RPLELDTDGIWCVLPATFPENYVVKTTNPKKAKVTISYPGAMLNVMVKDHFTNHQYQELE
DHNSLSYSPSSENSIFFEVDGPHLAMILPASKEEGKKLKKRYAVFNFDGSLAELKGFEVK
RRGELQLIKIFQSSVFEAFLKGTTLEECYDAVAKIADYWLDVLYSKAANMPDSELFELIA
ENRSMSRKLDDYGQQKSTSISTAKRLAEFLGDQMVKDAGLACRFIIAKKPEGAPVTERAI
PLAIFQAEPSVKKHFLRKWLKKADMSHFDIREILDWEYYIERLGGTIMKIVTIPAALQQV
PNPVPRIPHPVWLHKKLLERNDVFKQKKISEIFAPMAKKTTQMGMEEDSEDMVSSSQNGI
GDIEDIGGRTPRSGMAVSHKRKRGNSDTDTPNTQLDSQTSDLSQSWRDVLGAPPPMGNTR
EERNVWLEYHKKKWQMQAKEKQERKRRRLDFDTPVTAALPARGLGGFLRRTARSMMDMPW
QIVQLMETSLPGQYRLWAVIGNDLHSIKLNIPRIFFVNQKNPKDGEGPMWRKVQKTLPRS
HPVFHLYQYSVPEHIYQEHTNDMNADLSSPDIEGVYETQVPLLFRALVRLGCVVTVNRDF
SKVMAGRETDTFDLDNLEFRTLAQFSYLDPGTIKHLYIYHHVCGNKMMFGLFLPGSKKGT
IFVVDTVRSDQMPNVGALYNAERNTKVTKGADETALPEAGYTFEVKLEKDVRQAHRAIQR
MLSAYKDEKRGPTFIAVQSPQDFSHLTSVMPGLCDFPLVPIHITDSENLYNVLDWQRVGS
RRMLQHYMNCEIILQAMMEQCRYLHIPIGNMPRDITLFGCDLFFARHLHKHNHLLWCSPT
ERPDLGGKEADDNRLCMELEESSSVEVNNIGCYPTVCVELDIASLAVNTIIESAHVNDQE
GASAVSFDTMPQTSLEDMMQGQGAATMLASYDETALCSSTFRILKSMVHSWVREVTAYGN
VFADNQIIHFYRWLRSPNGLLYDPALRRTLHNMMKKVFMQLIAEFKRLGSQIVYANFNRL
LLCTKKRRLVDALAYVEYITNSIKSRELFHLVDITYEQCWEFLMWLDPANHGGVRGKLPS
LPGGNKTQKAGGEERQDEDVAVEDDDGEELNKSDTEDEPEIEMNWNIVHFLPEAAACQTN
FSMIVAGYILSVYNQIDEEQRRLTPGNTPVRRRGSSQTQKHLDPSAMPSTVSFAQDLVQG
ELAQQMFAITQKIQKKLAGSKSNQGNLAAEFPQLPGSHLPLNNPSLEFVKAVCKVLALDS
NVTIQVTKLKRDLLKLIGVGEFSPAAQFADPCLSYVLPEVICKSCNHIRDLDLCRDPYLS
QDGSGSVWSCVQCRAEYDVDEIEQSLVDAVHRKSMAYILQDLKCTKCKGVKENNMKRYCS
CAGDYTNTVSLSDFGKQLKTFSGIASHYKMTLLTETVEWLLSMNPKLSVSQVTS
NT seq 6825 nt   +upstreamnt  +downstreamnt
atggtactacagaactctggccggttcaagaacgagaggggccaaggttccggcgaatca
actggccgagaagacagcactgaaaaacgattgagcagagcgaccttgaatgatgaaatt
gacgttcgattcgggtttgataggtacaaggatccccaggagaaaacaggatggctcatc
aatatgcatccaactgacgtccttgatgaagataagcgtctggtcagtgctgttgattat
tattttattcaggaagatggatcacggtttaaggtgacgctgcctttcaaggcttacttc
tatgtggccacgaagcaagactgtgagcgagaggtcgcctctttcttgacacgcaagttc
tctgggaaaatagccactatcgaaagtgttgtgaaagaagatcttgacctgcacaaccac
ctggtggggttgaagcacaagtacctgaagttgtcgttcctcagtgtggaggatctgatg
aaggtgaagagggagatctttcctgccgtcaggaaaaacaaagagagggagaagcagaac
gaggcctacacagccatgctgaccagccacctgacgggggaagatggagtctccaagaag
atagcagaccagatggacaacatcattgacatcagggagtatgatgtcccctaccatgtt
cgagtctccattgacctgaagatcttcgtgggtcactggtactctttaagggggagagga
ggtgccccgcccgagatacggcagcgagaagatctagttgacagaccggatccagtggtg
ttggcgtacgacattgaaacaacaaaactacccttgaaattccctgacgcccagatagac
cagataatgatgatatcctacatgatagatggtcagggatatttgatatgtaacagggag
atagtttctcaagatgtggaagacttcgagtacacgccgagaccagagtttgaggggccc
ttcattgtgttcaatgaaccagacgaggtttcactaatcaggaaattcttcgagcatttc
caggaagtgcggccccaaatctgtgtaacatacaacggagacttcttcgattggcccttt
gtggaggcgcgggcagcagcccatgacatggacatgtttcgggaaatcggcttccagaag
gacaatcagggggaatacaagtccaggcactctatacacatggactgcttcagatgggtg
aaacgagacagctacctgccagttggaagtcagaatctgaaggcggttgccaaggccaag
ttgtgctacgatcctgtggagctagatccggaagagatgtgtcggatggcaagcgaggag
ccccaggtgttggcgaactactccgtgtcagacgcagtcgcgacgtactacctctacgtc
aaatatgtccaccccttcatctttgccctgtgtaccatcatccccatggagccggatgag
gtattgcggaagggctccgggactctgtgtgaggctctcctgatggtgcaggcctaccac
gctaacatcgtcttccccaacaagcaggagtcggtgctgaacaagctgacagaggatgga
cacgtgctggactcggagacctacgtcggtggccacgtcgaggcgttggaatctggggtg
ttccggtctgacattccatgcaggttcagaatggtgccggaagctttccagacactgatt
gacagcgtggagcggacaatgaagcacgccatcgaggtggaggagaaaatacctctcaac
acagtcaccaactttgacgaggtgtgcagtgacattgctgagaagttggagatgttacga
gactgccccaaccgtttggagaaccccatcatctaccatcttgatgtggacgccatgtac
ccaaacatcatcctcactaacagattgcagcctccagccattgttgacnctgtgacctgt
gctgcctgtgacttcaacaaaccggaagccctctgtcagcggaagatgccgtggatgtgg
agggagagttcagtaatgccatcacggaatgagtttcatcgcattcaacaacagttggag
aaacgagaangttccccatacttcccaggggaaccgagggcgctccatgaactgccgaaa
gaggaacaagctgccatagagaagaaacgtttggcagagtactgtcgaaagtacaagaag
accaaaataacccgaatggaagaaagaacagctaccatctgccagcgagaaaactccttc
cgtggacaccgcgtatgaagcttccgtgatcgacggtatgagttcaagggtctgaccaaa
gtttggaagaagaagctgagtgaggctgaggcgaagaaagatgcagtagaggcggttgga
aatagcgcatggtggtgctgtaacgactctctgcaactggctcacaagtgcatcctcaac
tccttctatggctacgttatgaggaagggagctcgctggtacagcatggagatggcgggt
attgtttgtttcactggcnncaacatcatcaaaagccaggagatagtcgaacaaattggt
cgcccattggagttggacacagatggaatctggtgcgttttgccggcaacgttccctgag
aattatgttgtcaagacaactaatccaaagaaggccaaggttactatatcttaccctggc
gccatgctcaatgtgatggtcaaggaccacttcaccaaccaccagtaccaggagttggag
gatcacaactctctcagctactccccaagcagtgagaactccatcttctttgaggtggac
ggaccgcatctggccatgatcctgcctgcctccaaagaggagggcaagaaactgaagaag
agatatgcagtgtttaactttgatggctctctggctgagctgaagggatttgaagttaaa
cgtcgtggagaactgcagctcatcaagatcttccagtcgtcggtgttcgaggcgtttctg
aaaggcactacacttgaggagtgttatgatgctgtggcaaagatcgcggactactggctg
gacgtgttgtacagcaaggctgcaaacatgcccgactccgaactgtttgaactcatcgct
gaaaaccgtagcatgtcccgtaaactggacgactacggccagcagaagtcaacgtccatt
agcacagctaagagactagcagagttcctgggagatcagatggtgaaggatgctggactg
gcttgtcgattcatcattgccaagaaacccgagggtgccccagtaactgagagagctatt
cctttagctatattccaagctgaacctagcgtcaaaaaacacttcttgagaaaatggttg
aagaaagctgatatgtcccactttgatatacgagagatcctcgactgggagtactacatc
gagaggctgggtggcaccatcatgaagatcgtcacaatcccagcagcccttcagcaggtg
ccaaatcctgtgcctcgtattcctcatccagtctggctacacaagaaacttctcgaaagg
aatgatgtcttcaaacagaagaaaatcagtgagatctttgcaccaatggcaaaaaagaca
acccagatggggatggaagaggactcggaggacatggtatcgtcgtcccagaatggcata
ggggacatagaggacatcggaggacgtacacccaggtcagggatggctgtgtcccacaag
aggaagcggggcaactctgacacagacacgccaaacacgcagctggactcgcagacgtct
gatctgtcccagagctggagggatgtacttggtgctccccctcccatgggtaatacaagg
gaggagaggaatgtatggctggagtaccacaagaagaagtggcagatgcaggctaaggag
aagcaggagaggaagaggcggagactggacttcgacaccccagtcactgctgccctgcca
gctcggggtctgggtggattcctgcgacggacggctcgtagtatgatggacatgccgtgg
cagattgtccagttaatggagaccagcctacctggccagtatagactgtgggccgtcatc
ggcaacgacctccactccatcaaactaaacatcccacgcatcttctttgtgaaccagaag
aatcccaaggatggggagggacccatgtggcgtaaggtacagaagaccctgccgcgatca
caccccgtgttccatctgtaccagtactctgttccagaacacatttaccaggaacatact
aatgatatgaacgctgacctgtcgtcccccgacattgaaggtgtgtacgagacacaggtt
ccccttctcttccgtgccctggtccgactcggctgtgttgtgactgtcaacagagacttc
tccaaggtcatggctggcagggaaactgacacatttgacctggacaacttggagttccgg
acattggcccagttctcctacctggatccaggcaccatcaaacacctgtacatctaccac
catgtgtgtgggaacaagatgatgtttggcttgttcttaccggggtcgaagaaggggacg
atcttcgtggtggacacggtgcgtagtgaccagatgccaaacgtaggagcgctctacaac
gctgagagaaacaccaaagtgacaaaaggtgctgatgagacagcactacctgaagctggc
tacacattcgaggtgaagctggagaaagatgtccgccaggcccacagagccatccagagg
atgttgtccgcatacaaggatgagaaaagggggccaacattcatcgccgtccagtctcct
caagacttctcccacctgacctccgtgatgccaggcttgtgtgacttccccttggtgccg
atccacatcacagacagtgagaacctgtacaatgtcttggactggcagagagttggaagt
cgtcggatgctgcagcactacatgaattgtgagatcatcctccaggcaatgatggaacag
tgccgctacctccatatccctataggaaacatgccaagggacataactctgtttggctgt
gatctgttcttcgcccggcatctccacaaacacaatcatctgctgtggtgctcgccgacc
gagaggcccgaccttggcggcaaggaagcagacgacaacagactctgtatggagcttgag
gagagctcttctgtggaagttaacaacatcggttgctaccccacggtgtgtgtggagctt
gacatagccagtcttgccgtcaacactatcattgagtctgcccatgtcaacgaccaggaa
ggagcaagtgcggtcagtttcgacacaatgccgcagacttctctggaggacatgatgcag
ggccagggtgcagccaccatgctggctagctatgacgagacagctctgtgctcctcaacg
ttcaggattcttaagagcatggtccacagctgggtgagggaagtgacagcttatggcaac
gtgtttgcagacaaccagatcattcacttctacagatggttacgatccccgaacggtttg
ctgtacgaccctgcactgagacgaacgctgcacaacatgatgaagaaagtcttcatgcag
ctgatcgcagagttcaagcgactggggtcacagatcgtctacgccaacttcaatcgcctg
ctactatgtacaaagaagcgccgcctggtggatgctttggcgtacgttgagtacatcaca
aacagcatcaagtctcgcgagctcttccaccttgttgatatcacttatgaacagtgttgg
gaatttctcatgtggcttgatccggccaatcatgggggagtgcgaggcaagctgccatcc
ctcccagggggcaacaagacacagaaggctgggggagaggagcgacaggatgaggacgtg
gctgttgaggacgacgatggagaggagctaaacaagtctgacactgaggacgagccagaa
atagagatgaactggaatattgtccacttcctccctgaagctgcagcatgtcagacaaat
ttcagcatgatagtggctggctacatcctatccgtgtacaaccagatcgatgaggaacag
cgtcgcctcacgccgggaaacacacctgtcagacgacgaggcagcagccagacacagaaa
cacctggatccttcagccatgccctcaactgtgtcgtttgctcaggatcttgtccagggg
gaacttgcacagcagatgtttgcaattacccaaaagattcagaaaaagcttgcaggaagt
aagagtaaccaaggcaacctagctgccgagttcccccagctgcctggctcccatctcccc
ctcaacaacccttccctggaatttgtcaaggccgtttgcaaggtgttggccctggacagc
aatgtgacaatccaggtgacgaagctgaagcgggacctgctaaagctgatcggggtcggg
gagttttctccggcagctcagtttgccgacccgtgtctctcatacgtgctaccagaggtg
atttgtaaatcatgcaaccacatccgtgaccttgacctatgtcgtgacccatacctcagt
caagatggttcagggagtgtctggtcctgtgtgcagtgccgggctgagtacgatgtggac
gagattgagcagagcctagtagacgcggtacatcggaagtccatggcctatattctacag
gacctcaaatgcaccaagtgtaaaggggtgaaggagaacaacatgaagcggtactgctcc
tgtgctggggactacacaaacactgtgtccctgtccgactttggcaaacagctcaagact
ttctcaggaatagccagccactacaagatgacattgctgaccgaaacggtggagtggctg
ctgtccatgaatccaaaattatcagtctctcaagtcaccagctag

DBGET integrated database retrieval system