Haliotis rubra (blacklip abalone): 124270499
Help
Entry
124270499 CDS
T07967
Name
(RefSeq) LOW QUALITY PROTEIN: nucleoprotein TPR-like
KO
K09291
nucleoprotein TPR
Organism
hrj
Haliotis rubra (blacklip abalone)
Pathway
hrj03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
hrj00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
124270499
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hrj03019
]
124270499
Messenger RNA biogenesis [BR:
hrj03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
124270499
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_MLP1_2
TolA_bind_tri
Cnn_1N
Motif
Other DBs
NCBI-GeneID:
124270499
NCBI-ProteinID:
XP_046561474
LinkDB
All DBs
Position
Unknown
AA seq
1697 aa
AA seq
DB search
MKVQNAKLASQLDFSAERYKVLQGNIDGYRKEIAALRDKNQQYCASVVKHEQTITLLRED
LMAAQENATRLEVQNDNRKAELNLVTNSEHRLMQELESVRREHLSQNMLLSSLQAIQNNL
ERAEYETKTRLNNQISAYEREVNSLKRRIDVQSEEHRSLTRNWESLVKNVQMELEREKTM
GQDNKTKLSDANKNVLELKQELSATESKLVAAENKLARLGEPRTTEHPQTSASAPVVQTE
SSEQVKDLRSEVTQLQQQVKSLKNQLETAKKHAQQYKAISDSVEETLKEQNKTSKEFQQA
LEQRSQDLKQSKEQLEKRIEAMEKERQELLNENIRISEESHSLNADLRKQLANLQNEMEE
AVQRRETAISNEEAAKRDYKQQADIAMDSQTKYERELILHAADVEALTTYKKQVEDFNNT
LSVSQEAAKKAEQTLKESQTSWMEQERILREEAKLLETRVQELTQQNAVLHEQMQKLSGQ
VTTIQKKASVGMAGKSGGVAGKAVGEDLAKSSDQLLEVVRFLRRDKEIAETKLEVAQAET
TRVNQRFSHLEKQLDYANKTLTEERSRSQVSVQTAVQHADLMRKVENMNVLTDSNKLLRQ
ERDKLHQQVTSLEAKTKKMESDIQPLQASLRSVQAQRDTISAEKTAIQNEVERWKGRTNH
LIEQANKSDPEEHRRIVQERDNLKRQLSLVNEERHKHRAELSRLNANLSTSQTEANSAKT
QMTQLNAQIVTLKKQNEEKLQDAEEKMKTINQLKKIGRKYKEQAENVGKELEQAQKDLLS
SRAKSANQEAAQPNIAAIEQASAELRQKLANMEKERDELKVQMQQRDTQVGEVKEQLQKQ
TQEHSQLQEACNKLKEENSEYEKKQTHSRSVLQTAKNKLTNQREQVERLTSETAELKKRL
STVETSNKEEQDLRQGMLKSQFEGRISRLEKELQDARGGQGPGLADLQQQLDRVQRENTE
LQAKIAALQKQLESQQKHISQPASIVTRPAATTPPSTSTSDQAPKMANIKPMATGTTSVG
QATPIPHSSAAAKATASIRPMAIAATSVASTSTATPTATVMPTTLTSQDVDDDLPSTSSS
GPAVTPIPSVSVPGRPQQVQIVAPQIEQTQPVDMSTDLVEESSPAAALELMQSQIQQQQQ
PQQQTQVTPVSPHLPSTSSGTVADSAASQSLGKRQREDTDSQEEAETQAKRTRTQQGSPL
PTITLTDENAQTVHLESQEVHHLHQAQTVEQEETPAEVAVESVSPQIVGGSQSEPASLTQ
LEDVPQHPPQELFAGPEQTVDAGAEVVHADEDSGDVIILNSEEEEGCGDEMEDSDEEEEY
DEGEYDEDEDEDEDEEAMAEQGDEEDDNDVVIIDIEDNEQSMPSQQQPAGPGPVIQQPII
AQHPVVSPRPTPALQPIVHGERLPSVSIRAHLPPFMLGGQPGPFEEEDCTVPSTPTLSVP
RRADGFAEALNSPQVSQRFVFGAEGSLSQPELAQLESQRALGMDDTRMDLSQFDDGGGGR
SVPTTPLQTSAPVALPEAHVEATLTAPVAEVGQPGGEDVETAQQTQEATRAEQDREDIEE
SALLEGDPPQDSTPSTPDTGDTRPETTGQKEAAEDDGSSTSQGAADPSGGPKPRIQRIVW
EGEGAANAPQPVTSTPQPQPTPPTTQPVRGHPVQRRPGGYQPRPRGPRRGGVNMRNMRGT
GHWRGRPMRGNYRSPQF
NT seq
5094 nt
NT seq
+upstream
nt +downstream
nt
atgaaggtgcagaatgccaagctggcttcacagcttgacttctcagcagagagatacaag
gtcctccagggcaacattgatggctacaggaaggagatcgcagcgctgagggacaagaat
caacagtactgtgcctcggttgtcaaacacgaacagaccatcaccctgctccgagaggac
ctgatggctgctcaagaaaatgcaacaagactagaagtccagaacgacaaccgaaaagct
gagttaaacctggtgacaaactcggagcatagactgatgcaggaactggagagtgtcagg
cgggaacacctgtcccagaacatgctgctctctagtctgcaggccatacagaataatcta
gagcgtgcagagtatgagaccaaaactcgtctgaacaaccagatcagtgcatatgagcgt
gaagtgaactccctgaagcgaaggattgacgtgcagtctgaggaacataggtcactgact
cgcaactgggagagcctggtgaagaatgtgcagatggaactagagcgtgagaagaccatg
ggacaggacaacaagaccaagttgtctgatgctaacaagaatgtcctggaactcaagcag
gagctctctgccacagaatcgaaactggttgcagctgagaacaagttggcccgactggga
gaacccagaactactgaacatccacagacgtcagcgtctgctcctgtagtgcagacagag
tcttctgaacaggtcaaggacctgaggtcagaggtcacccagctccagcaacaggttaaa
tcgttgaagaaccagttggagacagcaaagaagcacgcacagcagtacaaggccatctca
gacagcgtggaggagactctgaaggaacagaacaagacaagcaaggagttccaacaagcc
ctggagcagagaagccaggacttgaaacaatccaaggaacagctggagaagagaattgaa
gcaatggagaaggagagacaagagctgctcaatgagaacatccgcatctcagaggagagc
cattctctgaatgctgacctgaggaaacagttggcgaatctccagaatgagatggaggag
gcagtgcagagacgtgaaaccgccatctccaacgaggaggctgccaagcgggactacaag
caacaggccgacattgccatggattcacagaccaagtatgagagggagctgatcctccat
gctgctgatgtagaggccctgacaacctacaagaaacaggtggaggatttcaacaatacg
ctgtcagtctcacaagaagctgctaagaaggctgagcagactcttaaggaatcccagacg
tcatggatggagcaggagcgaatcttgagggaggaggccaagctgctggagacgagggtg
caggaactgacccagcagaatgctgtgctgcacgaacagatgcagaagctgagcggccag
gtgacaacaatacagaagaaggcctcagtgggcatggccgggaaatcagggggcgtggca
ggcaaggctgtgggcgaggacttggccaagtcctccgatcagttgcttgaagtcgtcaga
ttcttgcggagagacaaggagatcgcagagacaaagctggaggtggcacaggctgaaaca
actcgggttaatcagaggttttcccacctggagaaacagctggattatgccaacaagact
ctcactgaggagaggagtcgatctcaggtgtctgtccaaactgcagtccagcacgcagac
ttgatgcggaaggtagagaacatgaacgtgttgacagacagcaacaagcttctgagacag
gagagagacaagttgcatcagcaggttacaagtcttgaggccaagaccaagaagatggag
agtgacatccagcccctccaggccagcctccgcagtgtgcaggctcaacgggacacgatc
agtgccgagaagacagccatacagaacgaggtggagcggtggaagggacgaaccaatcac
ctcatcgaacaggcaaacaagtctgacccagaggaacatcgcaggattgtgcaggagagg
gacaatctgaagcgacagctatccctggtgaatgaggaaagacacaaacacagggctgag
ttgtccagattgaatgccaacttgtcaactagtcagactgaggcaaacagtgccaaaaca
cagatgacacagctgaatgcacagattgttaccttgaagaaacagaacgaagaaaagctg
caggatgctgaagagaaaatgaagacaatcaaccagctgaagaagatcggtcgtaaatat
aaggagcaggctgagaatgttggcaaggaactggaacaggcacagaaggatctgctgagc
tcccgagccaagtcagccaaccaggaagcagcccagcccaatattgctgccatagaacag
gcgtctgcagagctgcgacagaagctggccaacatggagaaggaaagggacgagctgaag
gtgcagatgcagcaacgggacacacaagtcggtgaagtgaaggagcagctgcagaaacaa
acacaggaacacagccagcttcaagaggcctgcaacaagctgaaggaggagaactcagag
tacgagaagaagcagacgcactcacgaagcgtgctccagaccgccaagaacaaactgacc
aatcagagagagcaggtggaaagactgacgagtgagactgctgagctgaaaaagaggcta
tccacagtggagacaagtaataaagaagaacaggacctgcgtcagggtatgctgaagtct
cagttcgagggccgcatcagccggctggagaaggagctgcaggatgcccgggggggacag
gggccgggcctggccgacctgcagcagcagctggaccgagtccagcgggagaacacagaa
ctccaggccaagatcgctgctctgcagaaacagcttgagtcccagcaaaaacacatcagc
cagcctgcctccatcgtcacacgacctgccgctaccaccccacccagcacatccacgtct
gaccaggctcccaagatggccaacatcaagccgatggctacaggcactaccagtgtgggt
caggccacacccatccctcacagctcagctgcagcgaaagccacagctagcatccgacct
atggccatcgcagcaacgtctgtggcctctacatccactgcaacacctactgctacagtc
atgcccacaacactcacatcacaggatgtggatgatgaccttccgtctacatcttcctcc
ggaccagcagtcacgcccatcccgtctgtcagtgtcccaggacgaccccagcaggtccag
atagttgcaccacagatcgagcagacccagcctgtagacatgtccacagaccttgtggaa
gagtcatcaccagctgccgctttggagttgatgcagtcacagatacagcagcagcagcag
ccacagcagcagacacaggtgacgccagtgtctccccacctgccatccacgtcatcaggg
acagtggcagacagtgcagctagtcagtcgctagggaagcgacagagggaggacacagat
agtcaagaggaagcagaaacacaggccaaaagaacaagaacacagcagggctcccctctc
ccaaccatcacgctcactgatgaaaacgcccagacagtccacctagagtcacaggaagtc
catcacctccaccaagcacagaccgtggaacaagaggagacacctgctgaagttgcagtt
gaaagcgtgtccccccagatagtaggaggttcccagtccgaacccgccagcctgacacag
ctggaggacgtgccacagcatcccccacaggagctgtttgcaggacccgagcagacagtc
gatgccggggcagaggtagtgcatgctgatgaagacagtggggatgtgatcatcctgaac
agtgaggaggaggagggttgtggagatgagatggaggactcggatgaagaggaggagtat
gatgaaggggaatacgatgaggatgaagacgaagatgaggatgaagaggcaatggcagaa
cagggagatgaggaggatgacaatgacgttgttatcattgacattgaagacaatgaacaa
tccatgccttcccaacagcagcctgcaggcccaggacccgtgattcagcaaccaatcata
gcacagcatcctgtagtaagtccacgcccaacccctgcccttcagccaatcgtgcatggc
gagcgattgccatctgtcagcatcagggcccatcttccgccatttatgttagggggtcag
ccaggaccatttgaagaggaggactgtacggtgccgagcacgcccacgctctctgtgccg
agacgagctgatggctttgcagaggccctgaattccccccaggtatcacagaggtttgtg
tttggtgccgagggcagtttgagccagccagaactggcccagctggagtcacagcgagca
ttagggatggacgacactcgcatggatctgtctcagtttgatgatggcggtggcggccgc
agtgtcccaacaacaccgttacagacatctgccccagtagccctccctgaggcacatgtg
gaggcaacgctgaccgccccagtggccgaggttgggcagcctggaggagaggacgtggaa
acagctcagcaaacacaggaggccactagagcagagcaggaccgtgaggacattgaggaa
tctgccttgttggagggagacccaccccaggactccacacccagcacacctgatacaggt
gataccaggccagagacaacaggacagaaggaagcagcagaggatgatgggagttcaaca
tcacagggagcagccgacccttcaggtggtccaaagccccggattcagcgtatagtgtgg
gagggcgagggtgcagccaatgctccccaacctgtcacctccaccccccagcctcagcca
acaccacccacgacccagcctgtacgtggacaccctgttcagcgccgacctgggggctac
caaccccggcctcggggcccccggaggggtggggtcaacatgaggaacatgcgggggaca
gggcactggaggggccgaccaatgagaggaaactataggtccccacagttttag
DBGET
integrated database retrieval system
