Helobdella robusta: HELRODRAFT_101326
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Entry
HELRODRAFT_101326 CDS
T03272
Name
(RefSeq) hypothetical protein
KO
K14399
polyribonucleotide 5'-hydroxyl-kinase [EC:
2.7.1.78
]
Organism
hro
Helobdella robusta
Pathway
hro03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
hro00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
HELRODRAFT_101326
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
hro03019
]
HELRODRAFT_101326
Enzymes [BR:
hro01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.1 Phosphotransferases with an alcohol group as acceptor
2.7.1.78 polynucleotide 5'-hydroxyl-kinase
HELRODRAFT_101326
Messenger RNA biogenesis [BR:
hro03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Pre-mRNA cleavage factor IIm (CFIIm)
HELRODRAFT_101326
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CLP1_P
Clp1
CLP1_N
nSTAND3
CbiA
ABC_tran
MMR_HSR1
ATP_bind_1
TniB
AAA_10
CTV_P13
AAA_29
AAA_24
RsgA_GTPase
AAA_18
AAA_16
Motif
Other DBs
NCBI-GeneID:
20194492
NCBI-ProteinID:
XP_009021869
JGI:
Helro1_101326
UniProt:
T1ED39
LinkDB
All DBs
Position
Unknown
AA seq
435 aa
AA seq
DB search
MATASDANTSTNSGELTETSSNKKMYTLLPEYELRFEVDKAAGSITIELVSGTAEFFGSE
LVKKKIYKFSVGAKGAIFTYEGCELCVCGEANEVYTANSPMMMMYANLHAGLDQMRKKAE
ESMNRGPRVLIVGPTDVGKSTLCKILVNYAARLGWTPILVDLDVGQNEISIPGTVGALCI
TRPADIQNGYDLDNPLVFHFGHKAPSENTSYYNSLVSVMAEAVNYRSEFNNHCNISGVII
NTCGWVKGSGYDCLKHAASAFEIEILVVMDHELLYTKFQKDIPDFVKIVMLPKSGGVVER
SQNFRTNKRYTKIKNYFYGVSGNLYPHTFEVRFQDVEIYKIGAPKLPDSMLPLGMIPEDN
NMKLVPVTISGSLEHHVLSTSYAISKEEVIRTNVSGFVIITKVDTERQLLTLLSPGPRPF
PWNILLLMEITFMET
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atggcgactgcatctgacgctaatacttctacaaattctggtgagctgactgaaacaagt
tcaaacaaaaaaatgtacacgttactgcctgagtatgagttgagatttgaggttgacaaa
gctgctggctctattaccattgaattagtatcaggaacagcagagttctttggctcagaa
ttagtgaaaaaaaagatctacaaattttcagttggggccaagggtgccatcttcacttac
gagggttgtgagttgtgcgtgtgtggtgaggctaatgaagtctatactgccaacagtcca
atgatgatgatgtacgcaaatttgcacgctggtcttgatcagatgaggaagaaggcagaa
gaatcaatgaacagaggaccaagggtgttgatagtcggtccgacggatgtaggtaaaagt
acactttgtaagatattagtgaactatgcggccagattaggctggacccccattcttgtt
gatctagatgttggacagaacgagatctcaattccaggaactgttggggcactgtgtatc
acacgtccggctgacattcaaaatggctacgacctcgacaaccctctcgtgtttcatttc
ggacacaaggccccatccgagaacacgtcctactacaattcactagttagtgtaatggcc
gaggccgtcaactaccgatccgaatttaataaccattgtaacattagtggggttatcatc
aatacgtgtggctgggttaaaggaagtggctacgactgcctgaagcatgctgcctctgct
ttcgagattgaaatcttagttgtaatggatcacgagctactctacacgaaatttcaaaaa
gacatccctgatttcgttaagatcgttatgctgcccaaatccggcggggtcgttgagagg
agtcaaaatttccgaacgaacaagagatatacaaagataaaaaattatttctatggcgtt
tccggcaatctataccctcacacgttcgaagtcaggtttcaagatgtcgagatttataag
attggagctcctaaacttccggactccatgctcccattaggaatgatcccagaagataac
aatatgaagctggttcctgttaccatatctggctcgttagaacaccacgtactgagtaca
agttatgcaatttccaaggaggaagttataagaaccaatgtctctggattcgtcattata
actaaagtggatacggaaagacaattactaactctgctgtctccaggaccaaggcctttc
ccatggaacattcttctgcttatggaaattaccttcatggaaacataa
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