Hirundo rustica (Barn swallow): 120750851
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Entry
120750851 CDS
T09369
Symbol
FDFT1
Name
(RefSeq) squalene synthase
KO
K00801
farnesyl-diphosphate farnesyltransferase [EC:
2.5.1.21
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt00100
Steroid biosynthesis
hrt01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09100 Metabolism
09103 Lipid metabolism
00100 Steroid biosynthesis
120750851 (FDFT1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
hrt01006
]
120750851 (FDFT1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.21 squalene synthase
120750851 (FDFT1)
Prenyltransferases [BR:
hrt01006
]
Terpene biosynthesis
Squalene/phytoene synthase
120750851 (FDFT1)
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SQS_PSY
SCC3_C
HAUS4
Cu_bind_CorA
Motif
Other DBs
NCBI-GeneID:
120750851
NCBI-ProteinID:
XP_039915831
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Position
3:complement(113973095..113984985)
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AA seq
418 aa
AA seq
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MELLRKWLGHPEDIYNLLRFKMGGYRAVMPRMDTDSLGCGLRTCYRYLNQTSRSFAAVIQ
ALDGELRHAVCIFYLVLRALDTVEDDMSIPLDVKVPMLQEFHSHLYQPDWKYTESKEKDR
QVLEDFPTISMEFRNLSKVYQDVISDICHKMGVGMAEFLEKKVDSQHEWDKYCHYVAGLV
GIGLSRLFSASELEDSIVGQDTELANSMGLFLQKTNIIRDYLEDQLEGREFWPREVWSRY
AKKLSDLAKPENIDVAVQCLNELITNALHHVPDVLTYLSRLRNQSVFNFCAIPQVMAIAT
LAACYNNQQVFRGVVKIRKGQAVTLMMDATNIQAVKAIVYQYVEEIYQKIPSTDPSSNKT
QQVIASIRAMSLPGSPMASRHHYSPIYLSCAMLLAALSWQYLSTLSTATEEYVQAGEN
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atggagctgctgcggaaatggctgggccaccccgaggacatctacaacctgctgcgcttc
aagatgggcggctaccgcgccgtcatgccgcggatggacacggactcgctgggatgtggc
ctccgcacctgctaccgctacctcaaccagaccagccgcagcttcgccgccgtcatccag
gctctggacggagagctgcgacatgcagtgtgcatattctacctagttctccgtgccctg
gacactgtagaggatgacatgagcatccccttggatgtcaaggtcccgatgctccaagag
ttccactcccatctctaccagccagactggaagtacacagagagcaaggagaaggaccgg
caggtgctggaagacttcccgacgatctccatggagttcagaaacctctccaaggtctac
caggatgtgatttctgatatttgccacaagatgggtgttgggatggcggagttcttggag
aagaaggtggattctcagcatgagtgggataagtattgtcactacgttgctgggctggtg
gggattggcctctcccgtctcttctctgcatcagagctggaagattccatcgtggggcag
gacacagagctggcaaactccatgggcctcttcctacagaaaaccaacatcatccgtgac
tatctggaggaccagctggagggaagggagttctggcccagagaggtttggagcagatat
gccaagaagctctcggaccttgccaagccagagaacatcgatgtggccgtgcagtgcctc
aatgagctcatcaccaacgccctccaccacgtccccgacgtcctcacctacctgtcccgc
ctcagaaaccaaagcgtcttcaacttctgcgctatcccccaggtgatggccattgccacg
ctggctgcctgctacaacaaccagcaggtgttcaggggggtggtgaagatccgcaagggc
caggccgtcaccctcatgatggatgccacgaacatacaagctgtcaaagccatcgtgtac
cagtatgtggaggagatctaccagaagatcccgagcacggacccctcgtccaacaagacg
cagcaggtcatcgcctccatccgcgccatgagcctgcccggcagccccatggcctcccgc
caccactactcgcccatctacctgtcctgtgccatgctcctggctgccctgagctggcag
tacctcagcaccctctccacggccaccgaggagtacgtgcaggcgggagagaactga
DBGET
integrated database retrieval system
