Hirundo rustica (Barn swallow): 120751292
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Entry
120751292 CDS
T09369
Symbol
POLR1B
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA2
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120751292 (POLR1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hrt03021
]
120751292 (POLR1B)
Enzymes [BR:
hrt01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120751292 (POLR1B)
Transcription machinery [BR:
hrt03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120751292 (POLR1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
zf-piccolo
Motif
Other DBs
NCBI-GeneID:
120751292
NCBI-ProteinID:
XP_039916802
LinkDB
All DBs
Position
3:188660..202224
Genome browser
AA seq
1123 aa
AA seq
DB search
MAGTGTEPLPDPHRLRLPRRGVTQRDLTSAHIESFNYAVSEGVYRAVQDVPPVEFALKDA
RLALALVGVSIAPPAVPAGTVCQERRVFPAECRGLRSTYRGRITADISWSVNDMPQGTIK
QPLGYIPIMVKSKLCNLCGFSPQDLMQHHEEEEEMGGYFIINGLEKVIRMLIMPRRNFPL
AVTRHKWKNRGPGFTEYGLLMHCVKDEHTAINMNLHYLENGCVMVNFIFRKELFFLPLGF
ALKALVNFPDYQIFEELVKGREDDTFYVNCVTEMMRAVVDAGCLTQRNVLDYLGKSFRVK
LNLPEWYSNEQAADFILSNCICIHLASKTEKFYLLCMMTQKLYAFAKGECMEDNPDSLMN
HEVLTPGQLFLMFLKERLETWLQSVRFVLEKRAEKADVNLNTDSLVKAFSLAPDFTKPFE
YLLATGNLRSKTGLGMLQDSGLCVVGDKLNFIRYLSHFRCIHRGAAFSQMRTTTVRKLLP
ESWGFLCPVDTPDGEPCGLMNHMTALCEIVTEMVPVTDIPPLLCSLGVTPIDAAPSQPYS
ECYRVVLDGSMVGWVERELAPEIAQTLRRFKITQEKRFPARAEVVLIPMTGKPSLHPGLF
IFTNPCRMVRPVRNLSYGKNEWIGTLEQIFMNVATLESEVVPGVTTHQELFPHSILSVVA
NLIPFSDHNQSPRNMYQCQMGKQTMGFPVYNYKDRSDNKLYHLHTPQSPLVRPSMYDYYG
MDSYPVGTNSIVAVISYSGYDMEDAMIVNKSSWQRGFAYGSVIKVESIDLSLKASRAGDN
LVFGIRPSDPNAGEKLDADGLPFVGSILQPGDPFYSFMNLNTGETFTVPYPSKEVGIVDN
VRLCSNDRGTGKFKKACITVRVPRNPTIGDKFASRHGQKGILSQLWPVEDMPFTESGMVP
DILFNPHGFPSRMTIGMLIESMAGKSAALHGVSYDATPFTFTEKKSALKYFGETLASAGY
NFFGTEKMYSGISGVELEAEIFVGVVYYQRLRHMVSDKFQVRTTGPRDAVTNQPIKGRNV
EGGIRFGEMERDALLAHGTSFLLQDRLFNCSDGSVAYVCTSCGSMTSPVLEKLSHASVTS
SRRYSCSICSEVDAIEVVPVPHVFRYFVAELAAMNIKTKLNVE
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atggcgggcaccgggacggagccgctcccggacccgcaccgcttgcggctgccgcggcga
ggcgtgacccagcgcgacctcaccagcgcccacatcgagtccttcaactacgccgtcagc
gagggcgtctatcgcgccgtgcaggatgtgcccccggtggagttcgcgctgaaggatgcc
cggctggcgctggcgctggtcggggtgtccatcgcccctcccgcagtgccggccgggacg
gtgtgccaggagaggagggtgttcccggccgagtgccgcgggctccgcagcacctaccgc
ggcaggatcacggccgacatcagctggtcagtgaatgacatgccacaagggactatcaaa
cagcccttagggtatattccaatcatggtgaagtccaaattgtgcaacctctgtggtttt
tctccacaagacctcatgcagcaccatgaggaggaggaggaaatgggaggctacttcata
atcaatggcttagaaaaagtaatcaggatgctgattatgcccaggcgaaacttccctctt
gcggtgacaagacacaagtggaaaaacagaggccctggtttcacagagtatgggctgttg
atgcactgtgtcaaggatgagcatactgcaataaatatgaaccttcactacttggaaaat
ggctgtgtcatggtgaatttcatttttcgcaaagagttgttcttcctccccttgggattt
gctctgaaggcattagttaatttcccagactaccagatttttgaagagctggtgaaagga
agggaagatgacaccttttatgtgaactgtgttactgagatgatgagagcggtggtggat
gccggctgtctgacacagcgaaacgtcctggattacctgggaaagagcttcagagtcaaa
ctcaacctgcctgagtggtacagcaatgaacaggctgcagatttcattctgagcaattgt
atctgcattcacctggccagtaaaactgaaaagttctacctgctctgtatgatgacccag
aagctctatgcttttgccaaaggggagtgcatggaggataatccagacagtctcatgaat
catgaggtgcttaccccaggacagcttttccttatgttcttaaaggagaggcttgaaacc
tggctgcagtctgttaggtttgttttggagaaaagagcagaaaaggcagatgtcaaccta
aatacagacagcctggtgaaggcattcagcctggcaccagacttcaccaagccatttgag
tatctgcttgcaactggtaacctgcggtctaaaacagggctgggcatgttacaggacagc
ggtctctgcgtggtgggggacaagctgaatttcatccgctacctctcgcacttccgctgc
attcacagaggggcggcgttctcccagatgagaaccaccaccgtccgcaagctgctgccc
gaatcctggggcttcctgtgccctgtggacaccccggacggagagccctgtgggctgatg
aaccacatgacagctctgtgcgaaatcgtcaccgagatggtgcccgtgacagacattcca
cctttgttatgttctctgggtgtcacccccattgacgcagctccaagccagccttactca
gagtgctacagggttgtcctggatggctccatggtgggctgggtagagcgggagttggct
cccgagattgcacaaaccctccgccgtttcaagataacacaagagaagagatttcctgca
cgggcagaagtggtccttatcccaatgacaggaaaacccagcctgcatcctgggctcttc
attttcactaacccttgccggatggtgcggcctgtcagaaacctgtcctatggaaagaat
gaatggattggcactctggaacagatcttcatgaacgtggccacgctggagtcagaggtg
gtgcctggagtgaccactcaccaggaactcttccctcacagcattttgagcgtggtggcc
aacctcattcccttctccgaccacaaccaaagtccacggaacatgtaccagtgccagatg
ggaaagcagaccatggggtttcctgtttacaactacaaggatcgctctgataacaagctg
taccacctgcacaccccccagagccctctggtgaggcccagcatgtatgactattatggg
atggacagctatcccgttggcaccaactccatcgtggctgtcatctcctacagtggctat
gacatggaagatgcaatgattgtaaataaatcctcctggcagagaggatttgcttatgga
agtgttatcaaggtggagagcattgacctttcccttaaagccagcagggcaggtgataat
ttagtatttggcatcaggcctagcgatccaaacgctggggagaagctggatgctgatgga
ctgccttttgttgggtctatcctgcagcctggggaccctttctacagcttcatgaacctc
aacacaggggagaccttcactgtgccctatccgagtaaggaagtgggcattgtggacaac
gttaggttgtgcagcaatgaccgtggcactgggaagttcaagaaagcttgcatcactgtg
agggttccccgaaatcccactattggagacaaatttgccagccgtcacggacagaaaggt
atcctgagccagctctggcccgtcgaggacatgcccttcacagagagcgggatggttcca
gacatcctgttcaaccctcacggctttccctcccgcatgaccatcgggatgttaattgag
agcatggcgggcaagtcagcagccctgcacggggtctcctatgatgccactcccttcacc
ttcaccgagaagaagtctgctctgaaatacttcggtgagactttggcgagcgcaggttac
aacttctttgggacagagaagatgtacagtggcatcagcggggtggagctggaggcagag
atcttcgtgggggtggtgtactaccagcgcctgcgccacatggtctccgacaagttccag
gtgaggaccacggggccccgagacgctgtcaccaaccagcccatcaaggggaggaacgtg
gaaggtgggatccgcttcggcgagatggagcgggatgcgctgctggcccacggcacgtcc
ttcctgctgcaggaccgcctgttcaactgctccgacggctccgtagcctacgtgtgcacc
agctgcggcagcatgacgtcccctgtgctggagaagctgtcccacgcctctgtgaccagc
agcaggaggtattcctgctccatctgcagcgaggtggacgccatcgaggttgtccctgtg
ccccatgtcttccgctactttgtggctgagctggcagccatgaacataaaaacaaagctc
aatgtggagtag
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