Hirundo rustica (Barn swallow): 120751720
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Entry
120751720 CDS
T09369
Symbol
CDKAL1
Name
(RefSeq) threonylcarbamoyladenosine tRNA methylthiotransferase isoform X1
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120751720 (CDKAL1)
Enzymes [BR:
hrt01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
120751720 (CDKAL1)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
120751720 (CDKAL1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
Motif
Other DBs
NCBI-GeneID:
120751720
NCBI-ProteinID:
XP_039917940
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Position
1:93308564..93704970
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AA seq
604 aa
AA seq
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MRGLGVVFKRFPNASLLQRFLKMPAACESVLEDIEDIVSAEGLKPHDRQFVRGNVFPKVR
KRNSQKNVQTDDEPPSDSIIPGVQKIWIRTWGCSHNNSDGEYMAGQLAAYGYKITDNSAE
ADLWLLNSCTVKNPAEDHFRNSIKKAQEGKKKVVLAGCVPQAQPRQEYLKGLSIIGVQQI
DRVVEVVEETIKGHSVRLLGQKKDNGKRLGGARLDLPKIRKNPLIEIISINTGCLNACTY
CKTKHARGDLASYPIEELVDRAKQSFQEGVCEIWLTSEDTGAYGRDIGTDLPTLLWKLVE
VIPEGAMLRLGMTNPPYILEHLEEMAKILNHPRVYAFLHIPVQSASDSVLMDMKREYCVA
DFKQVVDFLREKVPGITIATDIICGFPGETDEDFQETMKLVELYRFPSLFINQFYPRPGT
PAAKMPQVPAAVKKQRTKDLSQLFHSYNPYDHKVGERQRVLVTEESFDSNYYVAHNPFYE
QVLVPKDPLLMGKMVEVNIYEAGKHFMKGQPVSDARVHTASISRPLAKGEVSGLTVEFRR
SPQNGTNWKAQPSAEIPVKTRLSSWMALQLPWQQEGGGLKILSVSLALLAVLVMFYYGGM
KTEL
NT seq
1815 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccttggtgttgtattcaaacgctttcctaatgccagtcttctccaacgcttc
ttgaagatgcctgctgcctgtgagtcagtgcttgaggatatcgaagacattgtgtcggca
gaaggtttgaagccacatgatcggcagtttgtgagagggaatgtttttcccaaagtgcga
aaacgcaactcccaaaaaaacgttcagacagatgatgagcccccaagtgacagcattatt
cctggtgttcagaaaatctggattcgtacatggggatgctctcacaataattcggatggt
gaatacatggctggacagctggctgcatatggatacaaaattacagacaactctgctgaa
gcagatttatggttgctgaatagttgtacagtaaaaaatcctgctgaggatcacttcaga
aactcaatcaagaaagcccaagaagggaagaagaaagttgttctagcaggctgtgtacca
caagcccaacctcggcaggagtacctgaaaggcttgagtattataggggttcagcagata
gatcgtgtagtagaagttgtggaggaaactattaaaggtcattctgtgagactgctgggt
cagaaaaaggataatggaaaacgtttgggtggagcacgactggatttgccaaagattagg
aagaatccattgatagaaataatttccatcaatacagggtgtctcaatgcatgtacctac
tgtaaaactaagcatgccagaggagatctagcaagttatcctattgaagaactggtggac
agagccaaacagtcttttcaagagggtgtttgtgagatatggctgaccagtgaagacaca
ggggcttatggcagagacattggcacagacctccccacgcttctgtggaagctggttgaa
gttattcctgagggagctatgctgaggcttggcatgacaaaccctccctatattttagag
catctggaggaaatggccaagattctcaatcatccaagagtatatgcttttctgcacata
ccagtccagtcagcctctgacagtgtacttatggacatgaaaagagaatactgtgtggca
gacttcaaacaagtagtggatttccttagagaaaaagtgcctggaataacaattgctaca
gacatcatttgtggttttccaggagagacagatgaagattttcaagaaactatgaaactt
gtagaactgtacaggtttccgagcttgtttattaatcagttctacccacgtccaggaacc
ccagctgcaaaaatgcctcaagttccggctgcagtgaaaaaacagagaacgaaggatcta
tcccagctgtttcattcatacaatccatatgatcataaggttggcgagagacaaagagtt
ctggtaacagaagaatcctttgactccaattactacgttgctcacaatcctttctatgaa
caggtacttgtgccaaaggatcctctgttaatgggtaagatggtagaagtgaatatttat
gaagctgggaaacattttatgaaggggcagccagtatcagatgccagagttcacactgca
tccatcagcagaccgttagcaaaaggagaagtttctggtttaacagtggagttcagacgc
tcaccacagaatggcacaaactggaaagcacagccttctgctgagatcccagtgaaaaca
cggctcagctcctggatggctttgcagctcccatggcaacaagagggaggtggactgaag
atcctgtctgtcagcctggctctactggcagttcttgttatgttttactacggaggaatg
aaaacagaactgtga
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