Hirundo rustica (Barn swallow): 120761255
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Entry
120761255 CDS
T09369
Symbol
SLC6A4
Name
(RefSeq) sodium-dependent serotonin transporter
KO
K05037
solute carrier family 6 (neurotransmitter transporter, serotonin) member 4
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hrt02000
]
120761255 (SLC6A4)
Transporters [BR:
hrt02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
120761255 (SLC6A4)
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Gene cluster
GFIT
Motif
Pfam:
SNF
5HT_transport_N
PRONE
Motif
Other DBs
NCBI-GeneID:
120761255
NCBI-ProteinID:
XP_039938245
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All DBs
Position
19:3809396..3830412
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AA seq
668 aa
AA seq
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MEKKATSNETQPLTSKKDVSDCSKGEDCKENGLLVRNPKSALRLVEDGNKVHPSQGDKGE
AAQISNSYSGVQSSVPCNGEVEDGQGTAPAATTTTTTTTSTTCGAEAQQQLMELEDRETW
SKKIDFLLSVIGYAVDLGNVWRFPYICYQNGGGAFLIPYTIMAIFGGIPLFYMELALGQY
HRNGCISIWRKICPIFKGIGFAICIIDLYVASYYNTIMAWAFYYLISSFTAELPWTSCTN
PWNTGNCTNYFSKDNVSWSLHSTSPAEEFYTRQVLQVHRSNGLDDLGGISWQLTLCLLLI
FTIVYFSIWKGVKTSGKVVWVTATFPYIILFILLVRGATLPGAWRGVLYYLKPDWQKLLA
TEVWVDAAAQIFFSLGPGFGVLLAYASYNKFHNNCYQDALVTSTVNCLTSFVSGFVIFTV
LGYMAEMRNEDVSEVAKDTGPSLLFITYAEAIANMPASTFFAIIFFLMLLTLGLDSTFAG
LEGVITGVLDEFPHVWGKRRELFVLGLTIVCFLGSLATLTFGGAYVVKLFEEYATGPAVL
TVVFLEAVAVSWFYGITQFCNDVKEMLGSAPGWYWRVCWVAISPLFLLFVTCSFLSNPPE
LRLFDYDYPYWTTVVGYCIGTSSIIFIPIYMVYRLVITPGTLKERILKSITPETATEIPF
GDIRMNAV
NT seq
2007 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaaaggccacaagcaatgagacacagcccctgacttccaagaaggacgtctca
gactgcagcaaaggagaagactgtaaagagaacggacttctggtcaggaaccctaaatct
gccctgcggctggtggaggatggcaacaaagtccaccccagccagggcgataaaggggag
gcagctcagatctcaaatagttattcaggggttcagagctcagtgccctgcaatggagag
gtggaggatggccagggcacggccccagcagccaccaccacaaccaccaccaccacgtcc
accacctgcggggccgaagctcagcagcagctgatggagctggaggacagggagacctgg
agtaaaaaaattgactttctcctctccgtcattggatacgcagtggatctgggaaatgtg
tggagatttccttatatctgctatcaaaatggaggaggagcattcctcattccttacaca
atcatggccatctttggagggattcctctcttctatatggagttagcactaggacagtac
cacaggaatggctgtatttccatttggaggaaaatatgtcctatattcaaaggaattggc
tttgccatctgtatcatagatctttacgtagcttcctactacaacaccatcatggcttgg
gctttttactacctcatctcctccttcacggcggagctgccctggaccagctgcacgaac
ccctggaacacaggaaactgcaccaactacttcagcaaggacaatgtcagctggtccctg
cactccacctctcctgcagaagaattttatacgcgccaggttctgcaggtgcacaggtcc
aacgggctggatgacctggggggcattagctggcaactgaccctctgcttgttgttaatc
ttcaccattgtgtacttcagcatctggaaaggggtcaaaacctctggcaaggtggtttgg
gtgactgccacgttcccttacatcatcctcttcatcctgctcgtgagaggtgcaactttg
cctggggcttggagaggtgtcctctactacttgaaacctgactggcagaaactcctggcc
actgaggtttgggtggatgcagcagctcagatttttttctccctgggaccaggttttggg
gtcctgttggcttacgccagctacaacaaattccacaacaactgctaccaagatgctctg
gtcaccagcaccgtgaactgcttgaccagctttgtgtcagggtttgtcatcttcaccgtg
ctgggatacatggctgagatgaggaacgaagacgtgtcagaagttgccaaagacactgga
cccagcctgctcttcatcacctacgcagaggccattgcaaacatgccagcttccaccttc
ttcgccatcatcttcttcctgatgctgctcacgctggggttagacagcacgtttgcagga
ctagagggagtgatcactggagtcctggatgaattcccgcacgtctggggcaaacgcaga
gaattgtttgtccttggtctgaccatcgtttgctttttggggtcgctggcaaccctgaca
ttcggaggagcgtacgtggtgaagctgtttgaagaatacgccacgggtccagctgtcctg
accgtcgtgttcctggaggcagtggctgtgtcctggttctatggcatcacccagttttgc
aatgatgtgaaagaaatgctgggctctgccccaggctggtactggagagtttgctgggtt
gcaattagtcccctcttccttctgttcgtcacttgcagctttctgtccaaccctcctgag
ctgaggctttttgattatgattacccctactggaccacagttgtgggttactgcatagga
acctcctccatcatcttcattcccatctacatggtctatcgcttggtcatcaccccaggg
acacttaaggagcgtattctgaaaagcattactccagaaacagccacagaaattcccttt
ggagacatccgcatgaacgcagtataa
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