Hirundo rustica (Barn swallow): 120761666
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Entry
120761666 CDS
T09369
Symbol
NOTCH1
Name
(RefSeq) neurogenic locus notch homolog protein 1 isoform X1
KO
K02599
Notch 1
Organism
hrt
Hirundo rustica (Barn swallow)
Pathway
hrt04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
120761666 (NOTCH1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
EGF_2
Ank
Notch
NOD
NODP
Ank_4
Ank_5
Ank_3
EGF_3
cEGF
Motif
Other DBs
NCBI-GeneID:
120761666
NCBI-ProteinID:
XP_039939089
LinkDB
All DBs
Position
20:complement(2647176..2689478)
Genome browser
AA seq
2562 aa
AA seq
DB search
MERLLAPGLLVLLLPALTRGLRCSQLAESCLNGGKCETFPNGTEVCQCSGAYVGERCQLP
NPCLSSPCKNAGTCTALVRGSTADYTCACRLGFTDELCLTPRDNVCLSNPCRNGGTCDLL
TLSEYKCRCPPGWSGKTCQQADPCASNPCANGGQCVPFEAHYICRCTAGFHGANCKQDVN
ECNISPPVCKNGGSCTNEVGTYQCSCKPAYTGQNCEHLYVPCNPSPCQNGGTCRQIGDTT
YDCTCLPGFTGQNCEENINDCPGNNCKNGGTCVDGVNTYNCQCPPEWTGQYCTEDVDECQ
LMPNACQNGGTCHNNHGGYNCVCVNGWTGEDCSENIDDCAMAACFHGATCHDRVASFYCE
CPHGRTGLLCHLDDACISNPCNEGSNCDTNPVNGKAICTCPSGYMGPACNQDVDECSLGA
NPCEHAGKCINTQGSFQCQCLQGYSGPRCEIDVNECLSNPCQNDATCLDQIGEFQCICMP
GYEGVYCEINTDECASSPCLHNGNCLDKINEFHCECPTGFNGHLCQFDIDECASTPCKNG
AKCVDGPNTYSCECTEGFTGAHCEIDIDECDPDPCHYGTCKDGIASFTCLCQPGYTGHRC
DININECQSQPCKNGGTCQDRNNAYNCICLKGTTGSNCEINLDDCASNPCDYGKCIDKIN
GYECTCEPGYTGRMCNINIDECASNPCHNGGTCKDGINGFTCVCPEGFHDPKCLSEVNEC
NSNPCIHGKCHDGLNGYKCDCDPGWSGTNCDINNNECESNPCMNGGTCKDMTSGYICTCR
EGFSGPNCQTNINECASNPCLNQGTCIDDVAGYTCNCLLPYTGATCEDVLAPCAGSPCKN
GGECQESEDYKSFSCSCPPGWQGQTCEIDINECVKSPCRNGATCQNTNGSYRCACRTGFS
GRNCDTDIDDCKPNPCHNGGSCSDGIGTFFCECLAGFRGPKCEEDINECASNPCKNGANC
TDCVNSYTCTCPSGFSGIHCENNTPDCTESSCFNGGTCVDGINTFTCVCLPGFTGSYCEH
NINECDSKPCLNGGTCQDSYGTYKCTCPQGYTGLNCQNLVRWCDSSPCKNGGKCWQTSNL
YHCECNSGWTGLYCDVPSVSCEVAAKQQGIDVAHLCRNSGLCVDTGNTHFCRCQAGYTGS
YCEEQVDECSPNPCQNGATCTDYLGGYSCECVAGYHGVNCSEEINECLSHPCQNGGTCID
LINTYKCSCPRGTQGVHCEINVDDCSPFFDPVTLGPKCFNNGKCKDRVGGYSCICPPGFV
GERCEGDVNECLSNPCDARGTQNCVQRVNDYKCECRPGYAGRRCDTVVDGCKGKPCRNGG
TCAVASNTGRGFICKCPPGFVGATCENDSRTCGNLHCLNGGTCISIHKSSKCMCTPAFTG
PECQYPASSPCTSNPCYNGGTCEFFSDASPYYRCNCPANFNGLNCHILDFDFQGGIGQDI
IPPKIEEKCEIAVCAGYAGNKICDGKCNNHACGWDGGDCSLNFNDPWKNCSQSLQCWKYF
NDGKCDSQCNNAGCLYDGFDCQKYEGQCNPLYDQYCKDHFSDGHCDQGCNNFECEWDGLD
CANNMPEKLADGTLVVVVLITPENLKNNSFNFLRELSRVLHTNVVFKKNPKGEYMIFPYY
GNEEELKKHYIKRSTEDWSDMSSAVINKVKSSLYSRAGRRQKRELDQMDIRGSIVYLEID
NRQCIQSSSQCFQSATDVAAFLGALASLGNLNIPYKIEAVKSETAEPTKNSQLYPMYVVV
AALVLLAFIGLGVLVSRKRRREHGQLWFPEGFKVTESSKKKRREPLGEDSVGLKPLKNAS
DGTLMDDNQNEWGDEETLDTKKFRFEEQAMLPDTDDQTDHRQWTQQHLDAADLRISSMAP
TPPQGEIDADCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEDDAPAVISDFIYQGASL
HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL
IRNRATDLDARMHDGTTPLILAARLAVEGMLDDLINCHADVNAVDDLGKSALHWAAAVNN
VEAAMVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDI
AQERMHHDIVRLLDEYNLVRSPTLHNGPLGAPTLSPPLCSPNSYIGNLKPAVQGKKARKP
STKGLSCNGKDAKDLKARRKKSQDGKGCLLDSSGVLSPVDSLESPHGYLSDVASPPLMTS
PFQQSPSMPLNHLPGMPDAHLSINHLNMAGKQDMAMGNSGRMGFDSVPPRLSHLPVSSPS
TGMSSAPMSFSVGGGAGLNGQCDWLSRLQNGMVQGQYNPLRGSLQPGAHQQPQNLQHGMM
TSLHNGLPTAGLSQMMSYQAMPNTRLASQPHLMQSQQLQQMQQQQQQQQQQQLQQPSLQP
PQQQQPPPQQAPQPPPQQAPQQQQHHNPGSNGGGHMGQNFLGTELSQPELQPVSGSAMAV
HTILPQDSQMLPTSLPSSLAQPMTTTQFLTPPSQHSYSSPLDNTPSHQLQVPDHPFLTPS
PESPDQWSSSSPHSNVSDWSEGISSPPTSMQSQMGHIPEAFK
NT seq
7689 nt
NT seq
+upstream
nt +downstream
nt
atggagcggctcctggcgcccggcctcctggtgctcctgctgcccgccctgacgcgaggt
ttacggtgctcgcagcttgccgaatcctgcctcaacgggggcaagtgtgaaacttttccc
aacgggacggaggtgtgccagtgtagcggtgcctacgtgggcgagcggtgccagctgccc
aacccttgcctgagctccccctgcaagaacgccggcacctgcacggcgctggtgcgcggc
agcaccgcggattacacctgcgcctgccgcctgggcttcaccgacgagctgtgcctgacg
ccccgcgacaacgtctgcctcagcaacccctgccgcaacggcggcacctgcgacctgctg
acgctcagcgagtacaagtgccgctgcccgcccggctggtcaggcaaaacctgccagcag
gccgacccctgcgcctccaacccctgcgccaacggcggccagtgcgtgcccttcgaagcc
cactacatctgccgctgcaccgccggcttccacggcgccaactgcaagcaggacgtcaac
gagtgcaacatctccccgcccgtctgcaagaacgggggcagctgcaccaacgaggtgggc
acctaccagtgctcctgcaagccggcctacacggggcagaactgcgagcacctctacgtg
ccctgcaacccctcgccctgccagaacgggggcacctgccgccagatcggggacaccacc
tacgactgcacctgcctgccagggttcacgggtcagaactgcgaggagaacatcaacgac
tgcccgggcaacaactgcaagaacgggggcacctgcgtggacggcgtcaacacctacaac
tgccagtgcccacctgagtggacaggtcagtactgcaccgaggacgtggacgagtgccag
ctgatgcccaacgcctgccagaacggcggcacctgccacaacaaccacggcggctacaac
tgcgtctgcgtcaacggctggacgggcgaggactgcagcgagaacatcgacgactgcgcc
atggccgcctgcttccacggggccacctgccacgaccgggtggcctccttctactgcgag
tgcccccacggccgcacgggtttgctgtgccacctggacgacgcctgcatcagcaacccc
tgcaacgagggctccaactgcgacaccaaccccgtcaatggcaaagccatctgcacgtgt
ccttcggggtacatggggccagcctgcaaccaggacgtggacgagtgctcgctgggagct
aacccgtgcgagcacgcggggaagtgcatcaacacccaagggtccttccagtgccagtgt
ctgcagggctactcgggccctcgctgcgagattgatgtcaatgagtgcctctccaacccc
tgccagaacgatgccacctgcctcgaccagatcggggagttccagtgcatctgcatgccc
ggctacgagggggtttactgcgagatcaacacggacgagtgcgccagcagcccctgcctg
cacaacggcaactgcctcgacaagatcaacgagttccactgcgagtgccccactggcttc
aacgggcacctgtgccagtttgacatcgacgagtgtgccagcaccccctgcaagaatggt
gccaagtgcgtggacggccccaacacctacagctgcgagtgcactgaaggtttcacgggc
gcccactgcgagatcgacatcgacgagtgtgaccctgacccgtgccactacgggacctgc
aaggatggcatcgcctccttcacctgcctctgccagcccggctacaccggccaccgctgc
gacatcaacatcaacgagtgccagagccagccctgcaaaaacggggggacctgccaggac
aggaacaacgcctacaactgcatctgcctcaaagggaccacgggctccaactgcgagatc
aacctggatgactgtgccagcaacccctgcgactacggcaagtgcatcgacaagatcaat
ggctacgagtgcacctgcgagccggggtacacagggcgcatgtgcaacatcaacattgac
gagtgtgccagcaacccctgccacaacgggggcacgtgcaaggacggcatcaacggcttc
acctgcgtgtgccccgagggcttccacgaccccaagtgcctgtccgaagtcaacgagtgc
aacagcaacccctgcatccacgggaaatgccacgatggattgaatggctacaagtgtgac
tgcgaccctggctggagtgggacaaactgtgacattaacaacaacgagtgtgaatccaat
ccctgcatgaacggtggcacctgcaaggacatgaccagcggctacatctgcacctgcagg
gagggcttcagcggccccaactgccagaccaatatcaacgagtgtgcatccaacccctgc
ctgaaccagggcacgtgcattgatgatgttgctggctacacctgcaactgcctgctgccc
tacacaggagccacctgtgaggacgtgctggccccctgtgctggcagcccctgcaagaac
ggcggcgagtgccaggagtcggaggactacaagagcttctcctgcagttgcccccctggc
tggcaaggtcagacctgtgagattgacatcaatgagtgcgtgaagagcccctgcaggaac
ggggccacgtgccagaacaccaacgggagctaccgctgcgcctgccggaccggcttctcc
ggccgcaactgcgacaccgacatcgacgactgcaagcccaatccgtgccacaacggtggc
tcctgctccgatggcattggcacgttcttctgcgagtgcctggctggcttccgtgggccc
aagtgcgaggaggacatcaacgagtgcgccagcaacccctgcaagaacggggccaactgc
accgactgcgtcaacagctacacctgcacctgcccctccggcttcagcggcatccactgc
gagaacaacacccccgactgcacggagagctcctgcttcaacggcggcacgtgcgtggac
ggcatcaacaccttcacctgcgtgtgcctgcccggcttcacgggcagctactgcgagcac
aacatcaacgagtgcgactccaagccgtgcctcaacgggggcacgtgtcaggacagctac
ggcacgtacaagtgcacctgtccccagggatacaccggcctcaactgccagaacctggtg
cgctggtgtgactcctcgccctgcaaaaacggaggcaagtgctggcagaccagcaacctg
taccactgcgagtgcaacagcggctggacggggctctactgcgacgtccccagcgtgtcc
tgcgaggtggctgccaagcagcaaggtatcgatgtagcgcacctctgcaggaactcgggg
ctctgtgttgacactggcaacactcatttctgccgctgccaagctggctacaccggcagc
tactgcgaggagcaggtggatgaatgctcccccaacccctgccagaacggagccacctgc
acagactacctgggaggctactcctgtgagtgtgtggctggttatcatggagttaactgc
tcagaggagatcaatgagtgcttgtcccacccatgccagaacggaggaacctgcatcgat
ctcatcaatacctacaaatgctcctgccccagaggaactcaaggggtgcactgtgagatc
aatgtggatgactgcagccctttctttgatcctgtcaccctggggcccaagtgctttaac
aatggcaagtgcaaggatcgggtaggtggctacagctgcatctgcccccctggctttgta
ggggagcgctgcgagggagatgtcaacgagtgcctgtccaacccctgcgacgcccgcggc
acccagaactgcgtgcagcgggtcaacgactacaaatgcgagtgccggcctggctacgcg
ggccgccgctgtgacaccgtggtggacggctgcaaaggcaaaccctgcaggaatggggga
acctgtgctgttgccagcaacaccggccgcggcttcatctgcaagtgccccccgggcttc
gtgggcgccacctgcgagaacgactcccgcacctgcgggaacctgcactgcctcaacggt
ggcacctgcatctccatccacaagagctccaagtgcatgtgcacgccggccttcacgggc
cccgagtgccagtacccggccagcagcccctgcacctccaacccctgctacaacgggggc
acctgcgagttcttcagcgacgcctccccctactaccgctgcaactgccccgccaacttc
aacggcctcaactgccacatcctggacttcgacttccagggcggcatcgggcaggacatc
atcccgcccaagatcgaggagaagtgcgagatcgccgtgtgcgcggggtacgccggcaac
aagatctgcgacgggaagtgcaacaaccacgcctgcggctgggacgggggcgactgctcc
ctcaacttcaacgacccctggaagaactgctcccagtccctgcagtgctggaagtatttc
aacgacggcaagtgtgactctcagtgcaataacgctggctgcctctacgacgggtttgac
tgccagaaatacgaggggcagtgcaaccctctgtacgaccagtactgcaaagatcacttc
tcggacggtcactgcgaccagggctgcaacaattttgagtgcgagtgggacggtctggac
tgtgccaacaacatgccagagaagctggcagacggcacgctggtggtggtggtcctcatc
acgcccgagaacctgaagaacaactccttcaacttcctgcgggagctgagccgcgtgctg
cacaccaacgtggtcttcaagaagaaccccaagggggagtacatgatcttcccgtactac
ggcaatgaggaggagctgaaaaagcattacatcaagaggtccacagaggactggtcagat
atgtccagtgctgtcatcaacaaagtgaagagcagcctctactccagggctggcaggagg
cagaagagggagctcgatcagatggacatcagaggatccattgtctacttggaaattgat
aaccgccagtgcatccagtcatcttcccagtgcttccagagcgccaccgatgtggcagca
ttcctgggagccttggcctccctgggcaacctgaacataccctacaaaatagaggctgtc
aaaagtgagacggccgagcccacgaagaactcccagctgtatcctatgtacgtggtggtg
gctgcgctggtcttgctcgccttcatcgggctgggagtgctggtgtctcgcaagcgccgc
agggagcatggccaactctggttcccagagggcttcaaagtgacggagtcgagcaagaag
aagcggcgggagcccctcggggaggattctgttgggctgaaacccctcaaaaatgcttcg
gacggcacgctgatggatgacaaccagaatgagtggggtgacgaggagaccttggacacc
aagaagttcaggttcgaggagcaggcgatgctgcccgacacggacgaccagacggatcac
aggcagtggacgcagcagcacctggacgccgctgacctgcgcatttcctccatggccccg
acgcctccgcagggggaaatcgatgctgactgcatggatgtcaacgtcagagggccggac
ggcttcaccccgctgatgatcgcctcgtgcagcggaggagggctggagaccggcaacagc
gaggaggaggacgacgctcccgccgtcatctcggacttcatctaccagggcgccagcctg
cacaaccagactgaccgcacgggcgagaccgccctgcacctggccgccaggtactcgcgc
tcggacgctgccaagcgcctgctggaggccagcgccgacgccaacatccaggacaacatg
ggccgcacgcccctccacgccgccgtctctgccgacgcacaaggagtcttccagatcctg
attaggaacagggcaaccgacctggatgcccggatgcatgacgggaccactcccctgatc
ctggctgctcgcttggctgtggaggggatgctggatgacctcatcaactgccacgctgac
gtcaacgccgtggatgatttaggcaagtcagccctgcactgggcagctgctgtgaataat
gtggaagctgcaatggtcctcctgaagaacggtgccaataaggacatgcagaataataag
gaggagaccccactgttcctggcagccagagaagggagctacgaaaccgccaaggtcctg
ctggaccattttgccaaccgggacatcacggaccacatggaccggctgccgcgggacatc
gcccaggagcgcatgcaccacgacatcgtccggctgctggacgagtacaacctggtgcgg
agccccaccctgcacaacgggcccctgggggcacccaccctgtcccccccgctctgctcc
cccaacagctacatcggcaacctcaaacccgccgtgcagggcaagaaggccaggaagccg
agcaccaaggggctgagctgcaacggcaaggacgccaaagacctcaaagcccggaggaaa
aagtcccaggatggcaaagggtgtctgctcgacagctccggcgtgttgtctccggtggac
tcgctggagtcgccgcacgggtacctctcagacgtggcctctccgccgctgatgacctct
ccgttccagcagtccccttccatgcctctgaaccacctgccgggcatgcccgacgcccac
ctgagcatcaaccacctcaacatggcgggcaagcaggatatggccatgggcaactcgggc
aggatgggcttcgactcggtgccgccgcgcctgtcccacctgccggtgtccagccccagc
acggggatgagcagtgcccccatgagcttctcggtgggcggcggggccgggctgaacggg
cagtgcgactggctcagccggctgcagaacggcatggtgcagggccagtacaaccccctg
aggggcagcctgcagcccggggctcaccagcagccccagaacctgcagcacggcatgatg
acctcgctgcacaacgggctgcccaccgccggcttgtcgcagatgatgagctaccaggcc
atgcccaacacccggctggcctcgcagccccacctgatgcagagccagcagctccagcag
atgcagcagcagcagcagcagcagcagcagcagcagctccagcagcccagcctgcagccg
ccgcagcagcagcagccgccgccgcagcaagcgccgcagccgccgccgcagcaagcgccg
cagcaacagcagcaccacaaccccggctccaacgggggcggccacatgggccagaatttc
ctgggtacggagctgagccagcccgagctgcagccggtgagcggcagcgccatggccgtg
cacaccatcctgccgcaggattcccagatgctgcccacctccctgccctcctccctcgcc
cagcccatgaccaccacgcagttcctgacgccgccttcccagcacagttattcctccccc
ttggacaacacccccagccaccagctccaggtgcccgaccaccctttcctcacgccctcg
cccgagtcgccggatcagtggtccagctcctctcctcactccaacgtgtccgactggtcc
gagggcatctccagccctcccacgagtatgcagtcgcagatgggacacatccccgaggcc
ttcaagtga
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integrated database retrieval system
