Hirundo rustica (Barn swallow): 120762038
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Entry
120762038 CDS
T09369
Symbol
TRMT2B
Name
(RefSeq) LOW QUALITY PROTEIN: tRNA (uracil-5-)-methyltransferase homolog B
KO
K15331
tRNA (uracil-5-)-methyltransferase [EC:
2.1.1.35
]
Organism
hrt
Hirundo rustica (Barn swallow)
Brite
KEGG Orthology (KO) [BR:
hrt00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hrt03016
]
120762038 (TRMT2B)
Enzymes [BR:
hrt01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.35 tRNA (uracil54-C5)-methyltransferase
120762038 (TRMT2B)
Transfer RNA biogenesis [BR:
hrt03016
]
Eukaryotic type
tRNA modification factors
Methyltransferases
120762038 (TRMT2B)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
MTS
Methyltransf_4
Methyltransf_11
Ubie_methyltran
Methyltransf_32
Methyltransf_15
Methyltransf_12
PrmA
PCMT
AviRa
TPMT
Cons_hypoth95
Methyltransf_23
Methyltransf_18
UPF0020
Motif
Other DBs
NCBI-GeneID:
120762038
NCBI-ProteinID:
XP_039939952
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All DBs
Position
21:complement(4045320..4051715)
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AA seq
475 aa
AA seq
DB search
MALSCVLRPPRCHLRPPPLALPCLPAPHRSLVTATAATRGGRRKARVSCSLPEPSWEERL
ANAVTPLWRLPYQEQLQVKYESQRKVLQTLASRLEELGIDAQKPGGLCCPLQPVVPSPII
NGYRNKSTFSVNRGPDGNPKTVGLYVGTGKGRNIVCVKANHVENIPSKHKQVAQCYEEFI
CRSPLDSCILFHEGGHWRELVVRTTSHGHTMAIITFHPQQLGQEALATQKALLKEFFTCG
PGAVCALTSLYFQESTMTRCSHEQSPYQLLHGAPHIFEELLGLKFRISPDAFFQVNTAGA
EVLYQAVGELCQATGDTVLLDICCGTGTIGLSLAHRVSKVIGVEVVEKAIEDAEWNAASN
GISNCEFHSGKAEAVLPXALASWEDARPLVAVVNPSRAGLHYRVVRAIRNCRSIRRLLYI
SCKPEGEAMRNFLELCCPPDPRKKLAGEPFTPVLAVPFDMFPHTVHCELVLLFTR
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggctctgtcctgcgtgctgaggccaccgcgctgccacctccgccctccgccgctcgcc
ctgccctgcctgcccgctccgcaccgcagcctggtcacggccacagcagcgacccgggga
gggaggagaaaggccagggtgagctgcagcctgcctgagccttcctgggaggagaggtta
gcaaatgcagtgacgccactgtggagacttccctaccaagagcagctgcaggtaaagtat
gaaagccagaggaaggttttgcagacactggcatctcgtcttgaggagctgggcatagat
gcacagaaacctggtgggctctgctgtcctctgcagcctgtagtcccttcgcccatcatt
aatggctaccgaaacaaatcgactttctctgtgaaccgaggaccagatgggaaccccaaa
actgtggggttgtatgtaggaacaggcaaaggaagaaatattgtctgtgtgaaagccaac
catgtggagaacataccctcaaaacacaaacaagtagcccagtgctatgaggagttcatc
tgtcgctcccccctggactcctgcatcctcttccatgagggcgggcactggcgagagctc
gtggttcgtaccaccagccatggccacaccatggctatcatcaccttccacccccagcag
ctgggccaggaggcactggctactcagaaagcgttgctgaaggagttcttcacatgtggg
cccggagcagtctgtgccttgacttcactttatttccaagagagcacgatgacacgctgc
tcccacgagcagtccccttaccagctcctccacggagcaccgcacatcttcgaggaactg
ctcggcctgaagttccgcatctccccagacgcctttttccaagtcaacacggctggagca
gaagttctgtaccaggcagtcggggagctctgccaggctactggggacactgtcctcctt
gacatctgctgcggaacaggcacaatcggtctctctctggctcaccgagtgtccaaggtt
attggtgtcgaggtggtggagaaggcaatagaggatgctgagtggaatgcagcatccaat
gggatctcaaactgtgagtttcacagtggaaaggcagaggctgtgttaccancagctctg
gcatcgtgggaggatgcccgaccgcttgttgctgtggtgaacccttctcgggctggccta
cattacagggttgtgcgagccatccggaactgccggtccatccgcaggctgctctacatc
tcctgcaagccagagggtgaagccatgaggaacttccttgagctgtgctgcccacctgac
ccacggaagaagctggcaggggagccatttacccctgtgttggctgttccttttgacatg
tttcctcacactgttcattgtgagctggtgctgctcttcacccgctga
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