Homo sapiens (human): 1299
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Entry
1299 CDS
T01001
Symbol
COL9A3, DJ885L7.4.1, EDM3, IDD, MED, STL6
Name
(RefSeq) collagen type IX alpha 3 chain
KO
K08131
collagen type IX alpha
Organism
hsa
Homo sapiens (human)
Pathway
hsa04151
PI3K-Akt signaling pathway
hsa04510
Focal adhesion
hsa04512
ECM-receptor interaction
hsa04820
Cytoskeleton in muscle cells
hsa04974
Protein digestion and absorption
hsa05165
Human papillomavirus infection
Network
nt06539
Cytoskeleton in muscle cells
Element
N01814
Extracellular matrix - Basal lamina
Disease
H00476
Multiple epiphyseal dysplasia
H02072
Stickler syndrome
H02539
Intervertebral disc disease
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
1299 (COL9A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
1299 (COL9A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
1299 (COL9A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
1299 (COL9A3)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
1299 (COL9A3)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
1299 (COL9A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
hsa00535
]
1299 (COL9A3)
Proteoglycans [BR:
hsa00535
]
Extracellular matrix (ECM) proteoglycans
Others
1299 (COL9A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
1299
NCBI-ProteinID:
NP_001844
OMIM:
120270
HGNC:
2219
Ensembl:
ENSG00000092758
UniProt:
Q14050
Structure
PDB
LinkDB
All DBs
Position
20:62816213..62841159
Genome browser
AA seq
684 aa
AA seq
DB search
MAGPRACAPLLLLLLLGELLAAAGAQRVGLPGPPGPPGPPGKPGQDGIDGEAGPPGLPGP
PGPKGAPGKPGKPGEAGLPGLPGVDGLTGRDGPPGPKGAPGERGSLGPPGPPGLGGKGLP
GPPGEAGVSGPPGGIGLRGPPGPSGLPGLPGPPGPPGPPGHPGVLPEGATDLQCPSICPP
GPPGPPGMPGFKGPTGYKGEQGEVGKDGEKGDPGPPGPAGLPGSVGLQGPRGLRGLPGPL
GPPGDRGPIGFRGPPGIPGAPGKAGDRGERGPEGFRGPKGDLGRPGPKGTPGVAGPSGEP
GMPGKDGQNGVPGLDGQKGEAGRNGAPGEKGPNGLPGLPGRAGSKGEKGERGRAGELGEA
GPSGEPGVPGDAGMPGERGEAGHRGSAGALGPQGPPGAPGVRGFQGQKGSMGDPGLPGPQ
GLRGDVGDRGPGGAAGPKGDQGIAGSDGLPGDKGELGPSGLVGPKGESGSRGELGPKGTQ
GPNGTSGVQGVPGPPGPLGLQGVPGVPGITGKPGVPGKEASEQRIRELCGGMISEQIAQL
AAHLRKPLAPGSIGRPGPAGPPGPPGPPGSIGHPGARGPPGYRGPTGELGDPGPRGNQGD
RGDKGAAGAGLDGPEGDQGPQGPQGVPGTSKDGQDGAPGEPGPPGDPGLPGAIGAQGTPG
ICDTSACQGAVLGGVGEKSGSRSS
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atggccgggccgcgcgcgtgcgccccgctcctgctcctgctcctgctcggggagcttctg
gcggccgccggggcgcagagagtgggactccccggcccccccggccccccagggccgccc
gggaagcccggccaggacggcattgacggagaagctggtcctccaggtctgcctgggccc
ccgggaccaaagggggccccaggaaagccggggaaaccaggagaggctgggctgccggga
ctgccgggtgtggatggtctgactggacgagatggaccccctggacccaagggtgcccct
ggggaacggggaagtctgggacccccggggccgcccgggctggggggcaaaggcctccct
ggaccccccggagaggcaggagtgagcggccccccaggtgggatcggcctccgcggcccc
ccgggaccttctggactccccggcctccctggtcccccaggacctcccggaccccctgga
cacccaggagtcctccctgaaggcgctactgaccttcagtgcccaagtatctgcccgcca
ggtcccccagggccccctggaatgccagggttcaagggacccactggctacaaaggcgag
cagggggaagtcggcaaggacggcgagaagggtgaccctggcccccctgggcccgccggc
ctcccgggcagcgtggggctgcagggcccccggggattacgaggactgccagggccactc
gggccccctggggaccggggtcccattgggttccgagggccgcctgggatcccaggagcg
cctgggaaagcgggtgaccgaggcgagaggggcccagaagggttccgcggccccaagggt
gacctcggcagacctggtcccaagggaacccccggagtggccgggccaagcggagagccg
ggcatgccgggcaaggacggccagaatggcgtgccaggactcgatggccagaagggagag
gctggtcgcaacggtgctccgggagagaagggccccaacgggctgccgggcctccctgga
cgagcggggtccaaaggcgagaagggagaacggggcagagctggggagctgggtgaggcc
ggcccctctggagagccaggcgtccctggagatgctggcatgcctggggagcgcggtgag
gctggccaccggggctcagcgggggccctcggcccacaaggccctcccggagcccctggt
gtccgaggcttccagggccagaagggcagcatgggagaccccggccttccaggcccccag
ggcctccgaggtgacgtgggcgaccggggtccgggaggtgccgcaggccctaagggagac
cagggtattgcaggttccgacggtcttcctggggataaaggagaactgggtcccagcggc
ctggtcggacccaaaggagagtctggcagtcgaggggagctgggccccaaaggcacccag
ggtcccaacggcaccagcggtgttcagggtgtccccgggccccccggtcctctgggcctg
cagggcgtcccgggtgttcctggcatcacggggaagccgggagttccggggaaggaggcc
agcgagcagcgcatcagggagctgtgtggggggatgatcagcgaacaaattgcacagtta
gccgcgcacctaaggaagcctttggcacccgggtccattggtcggcccggtccagctggc
ccccctgggcccccaggacccccaggctccattggtcaccctggcgctcgaggaccccct
ggataccgcggtcccactggggagctgggagaccccgggcccagaggaaaccagggtgac
agaggagacaaaggcgcggcaggagcagggctggacgggcctgaaggagaccaggggccc
caaggaccccaaggcgtgcccggcaccagcaaggacggccaggacggtgctcccggcgag
cctgggcctcccggagatcctgggcttccaggtgccattggggcccaggggacaccgggg
atctgcgacacctcagcctgccaaggagccgtgttaggaggggtcggggagaaatcaggc
tctcgaagctcataa
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