KEGG   Homo sapiens (human): 2072
Entry
2072              CDS       T01001                                 
Symbol
ERCC4, ERCC11, FANCQ, RAD1, XFEPS, XPF
Name
(RefSeq) ERCC excision repair 4, endonuclease catalytic subunit
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03420  Nucleotide excision repair
hsa03460  Fanconi anemia pathway
Network
nt06502  Nucleotide excision repair
nt06508  Interstrand crosslink repair
  Element
N01431  Core NER reaction
N01465  Lesion bypass by TLS and DSB formation
Disease
H00076  Cockayne syndrome
H00238  Fanconi anemia
H00403  Disorders of nucleotide excision repair
H01428  Xeroderma pigmentosum
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    2072 (ERCC4)
   03460 Fanconi anemia pathway
    2072 (ERCC4)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsa03032]
    2072 (ERCC4)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    2072 (ERCC4)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    2072 (ERCC4)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     2072 (ERCC4)
SSDB
Motif
Pfam: ERCC4 HHH_5 LUC7
Other DBs
NCBI-GeneID: 2072
NCBI-ProteinID: NP_005227
OMIM: 133520
HGNC: 3436
Ensembl: ENSG00000175595
UniProt: Q92889 A0A1W1GSK9
Structure
LinkDB
Position
16:13920154..13952348
AA seq 916 aa
MESGQPARRIAMAPLLEYERQLVLELLDTDGLVVCARGLGADRLLYHFLQLHCHPACLVL
VLNTQPAEEEYFINQLKIEGVEHLPRRVTNEITSNSRYEVYTQGGVIFATSRILVVDFLT
DRIPSDLITGILVYRAHRIIESCQEAFILRLFRQKNKRGFIKAFTDNAVAFDTGFCHVER
VMRNLFVRKLYLWPRFHVAVNSFLEQHKPEVVEIHVSMTPTMLAIQTAILDILNACLKEL
KCHNPSLEVEDLSLENAIGKPFDKTIRHYLDPLWHQLGAKTKSLVQDLKILRTLLQYLSQ
YDCVTFLNLLESLRATEKAFGQNSGWLFLDSSTSMFINARARVYHLPDAKMSKKEKISEK
MEIKEGEETKKELVLESNPKWEALTEVLKEIEAENKESEALGGPGQVLICASDDRTCSQL
RDYITLGAEAFLLRLYRKTFEKDSKAEEVWMKFRKEDSSKRIRKSHKRPKDPQNKERAST
KERTLKKKKRKLTLTQMVGKPEELEEEGDVEEGYRREISSSPESCPEEIKHEEFDVNLSS
DAAFGILKEPLTIIHPLLGCSDPYALTRVLHEVEPRYVVLYDAELTFVRQLEIYRASRPG
KPLRVYFLIYGGSTEEQRYLTALRKEKEAFEKLIREKASMVVPEEREGRDETNLDLVRGT
ASADVSTDTRKAGGQEQNGTQQSIVVDMREFRSELPSLIHRRGIDIEPVTLEVGDYILTP
EMCVERKSISDLIGSLNNGRLYSQCISMSRYYKRPVLLIEFDPSKPFSLTSRGALFQEIS
SNDISSKLTLLTLHFPRLRILWCPSPHATAELFEELKQSKPQPDAATALAITADSETLPE
SEKYNPGPQDFLLKMPGVNAKNCRSLMHHVKNIAELAALSQDELTSILGNAANAKQLYDF
IHTSFAEVVSKGKGKK
NT seq 2751 nt   +upstreamnt  +downstreamnt
atggagtcagggcagccggctcgacggattgccatggcgccgctgctggagtacgagcga
cagctggtgctggaactgctcgacactgacgggctagtagtgtgcgcccgcgggctcggc
gcggaccggctcctctaccactttctccagctgcactgccacccagcctgcctggtgctg
gtgctcaacacgcagccggccgaggaggagtattttatcaatcagctgaagatagaagga
gttgaacacctccctcgccgtgtaacaaatgaaatcacaagcaacagtcgctatgaagtt
tacacacaaggtggtgttatatttgcgacaagtaggatacttgtggttgacttcttgact
gatagaataccttcagatttaattactggcatcttggtgtatagagcccacagaataatc
gagtcttgtcaagaagcattcatcttgcgcctctttcgccagaaaaacaaacgtggtttt
attaaagctttcacagacaatgctgttgcctttgatactggtttttgtcatgtggaaaga
gtgatgagaaatctttttgtgaggaaactgtatctgtggccaaggttccatgtagcagta
aactcatttttagaacagcacaaacctgaagttgtagaaatccatgtttctatgacacct
accatgcttgctatacagactgctatactggacattttaaatgcatgtctaaaggaacta
aaatgccataacccatcgcttgaagtggaagatttatctttagaaaatgctattggaaaa
ccttttgacaagacaatccgccattatctggatcctttgtggcaccagcttggagccaag
actaaatccttagttcaggatttgaagatattacgaactttgctgcagtatctctctcag
tatgattgtgtcacatttcttaatcttctggaatctctgagagcaacggaaaaagctttt
ggtcagaattcaggttggctgtttcttgactccagcacctcgatgtttataaatgctcga
gcaagggtttatcatcttccagatgccaaaatgagtaaaaaagaaaaaatatctgaaaaa
atggaaattaaagaaggggaagaaacaaaaaaggaactggtcctagaaagcaacccaaag
tgggaggcactgactgaagtattaaaagaaattgaggcagaaaataaggagagtgaagct
cttggtggtccaggtcaagtactgatttgtgcaagtgatgaccgaacatgttcccagctg
agagactatatcactcttggagcggaggccttcttattgaggctctacaggaaaaccttt
gagaaggatagcaaagctgaagaagtctggatgaaatttaggaaggaagacagttcaaag
agaattaggaaatctcacaaaagacctaaagacccccaaaacaaagaacgggcttctacc
aaagaaagaaccctcaaaaagaaaaaacggaagttgaccttaactcaaatggtaggaaaa
cctgaagaactggaagaggaaggagatgtcgaggaaggatatcgtcgagaaataagcagt
agcccagaaagctgcccggaagaaattaagcatgaagaatttgatgtaaatttgtcatcg
gatgctgctttcggaatcctgaaagaacccctcactatcatccatccgcttctgggttgc
agcgacccctatgctctgacaagggtactacatgaagtggagccaagatacgtggttctt
tatgacgcagagctaacctttgttcggcagcttgaaatttacagggcgagtaggcctggg
aaacctctgagggtttactttcttatatacggaggttcaactgaggaacaacgctatctc
actgctttgcggaaagaaaaggaagcttttgaaaaactcataagggaaaaagcaagcatg
gttgtccctgaagaaagagaaggcagagatgaaacaaacttagacctagtaagaggcaca
gcatctgcagatgtttccactgacactcggaaagccggtggccaggaacagaatggtaca
cagcaaagcatagttgtggatatgcgtgaatttcgaagtgagcttccatctctgatccat
cgtcggggcattgacattgaacccgtgactttagaggttggagattacatcctcactcca
gaaatgtgcgtggagcgcaagagtatcagtgatttaatcggctctttaaataacggccgc
ctctacagccagtgcatctccatgtcccgctactacaagcgtcccgtgcttctgattgag
tttgaccctagcaagcctttctctctcacttcccgaggtgccttgtttcaggagatctcc
agcaatgacattagttccaaactcactcttcttacacttcacttccccagactacggatt
ctctggtgcccctctcctcatgcaacggcggagttgtttgaggagctgaaacaaagcaag
ccacagcctgatgcggcgacagcactggccattacagcagattctgaaacccttcccgag
tcagagaagtataatcctggtccccaagacttcttgttaaaaatgccaggggtgaatgcc
aaaaactgccgctccttgatgcaccacgttaagaacatcgcagaattagcagccctgtca
caagacgagctcacgagtattctggggaatgctgcaaatgccaaacagctttatgatttc
attcacacctcttttgcagaagtcgtatcaaaaggaaaagggaaaaagtga

KEGG   Homo sapiens (human): 2067
Entry
2067              CDS       T01001                                 
Symbol
ERCC1, COFS4, RAD10, UV20
Name
(RefSeq) ERCC excision repair 1, endonuclease non-catalytic subunit
  KO
K10849  DNA excision repair protein ERCC-1
Organism
hsa  Homo sapiens (human)
Pathway
hsa01524  Platinum drug resistance
hsa03420  Nucleotide excision repair
hsa03460  Fanconi anemia pathway
Network
nt06502  Nucleotide excision repair
nt06508  Interstrand crosslink repair
  Element
N01431  Core NER reaction
N01465  Lesion bypass by TLS and DSB formation
Disease
H00403  Disorders of nucleotide excision repair
H02570  Cerebro-oculo-facio-skeletal syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    2067 (ERCC1)
   03460 Fanconi anemia pathway
    2067 (ERCC1)
 09160 Human Diseases
  09176 Drug resistance: antineoplastic
   01524 Platinum drug resistance
    2067 (ERCC1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    2067 (ERCC1)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     2067 (ERCC1)
SSDB
Motif
Pfam: Rad10 HHH_5 HHH HHH_2 UPF0758_N
Other DBs
NCBI-GeneID: 2067
NCBI-ProteinID: NP_001974
OMIM: 126380
HGNC: 3433
Ensembl: ENSG00000012061
UniProt: P07992
Structure
LinkDB
Position
19:complement(45407334..45451547)
AA seq 297 aa
MDPGKDKEGVPQPSGPPARKKFVIPLDEDEVPPGVAKPLFRSTQSLPTVDTSAQAAPQTY
AEYAISQPLEGAGATCPTGSEPLAGETPNQALKPGAKSNSIIVSPRQRGNPVLKFVRNVP
WEFGDVIPDYVLGQSTCALFLSLRYHNLHPDYIHGRLQSLGKNFALRVLLVQVDVKDPQQ
ALKELAKMCILADCTLILAWSPEEAGRYLETYKAYEQKPADLLMEKLEQDFVSRVTECLT
TVKSVNKTDSQTLLTTFGSLEQLIAASREDLALCPGLGPQKARRLFDVLHEPFLKVP
NT seq 894 nt   +upstreamnt  +downstreamnt
atggaccctgggaaggacaaagagggggtgccccagccctcagggccgccagcaaggaag
aaatttgtgatacccctcgacgaggatgaggtccctcctggagtggccaagcccttattc
cgatctacacagagccttcccactgtggacacctcggcccaggcggcccctcagacctac
gccgaatatgccatctcacagcctctggaaggggctggggccacgtgccccacagggtca
gagcccctggcaggagagacgcccaaccaggccctgaaacccggggcaaaatccaacagc
atcattgtgagccctcggcagaggggcaatcccgtactgaagttcgtgcgcaatgtgccc
tgggaatttggcgacgtaattcccgactatgtgctgggccagagcacctgtgccctgttc
ctcagcctccgctaccacaacctgcacccagactacatccatgggcggctgcagagcctg
gggaagaacttcgccttgcgggtcctgcttgtccaggtggatgtgaaagatccccagcag
gccctcaaggagctggctaagatgtgtatcctggccgactgcacattgatcctcgcctgg
agccccgaggaagctgggcggtacctggagacctacaaggcctatgagcagaaaccagcg
gacctcctgatggagaagctagagcaggacttcgtctcccgggtgactgaatgtctgacc
accgtgaagtcagtcaacaaaacggacagtcagaccctcctgaccacatttggatctctg
gaacagctcatcgccgcatcaagagaagatctggccttatgcccaggcctgggccctcag
aaagcccggaggctgtttgatgtcctgcacgagcccttcttgaaagtaccctga

KEGG   Homo sapiens (human): 9937
Entry
9937              CDS       T01001                                 
Symbol
DCLRE1A, PSO2, SNM1, SNM1A
Name
(RefSeq) DNA cross-link repair 1A
  KO
K15340  DNA cross-link repair 1A protein
Organism
hsa  Homo sapiens (human)
Network
nt06508  Interstrand crosslink repair
  Element
N01465  Lesion bypass by TLS and DSB formation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    9937 (DCLRE1A)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Nucleases
    9937 (DCLRE1A)
SSDB
Motif
Pfam: DRMBL Lactamase_B_2 Lactamase_B Glyco_hydro_45 RMMBL
Other DBs
NCBI-GeneID: 9937
NCBI-ProteinID: NP_001258745
OMIM: 609682
HGNC: 17660
Ensembl: ENSG00000198924
UniProt: Q6PJP8
Structure
LinkDB
Position
10:complement(113834725..113854394)
AA seq 1040 aa
MLEDISEEDIWEYKSKRKPKRVDPNNGSKNILKSVEKATDGKYQSKRSRNRKRAAEAKEV
KDHEVPLGNAGCQTSVASSQNSSCGDGIQQTQDKETTPGKLCRTQKSQHVSPKIRPVYDG
YCPNCQMPFSSLIGQTPRWHVFECLDSPPRSETECPDGLLCTSTIPFHYKRYTHFLLAQS
RAGDHPFSSPSPASGGSFSETKSGVLCSLEERWSSYQNQTDNSVSNDPLLMTQYFKKSPS
LTEASEKISTHIQTSQQALQFTDFVENDKLVGVALRLANNSEHINLPLPENDFSDCEISY
SPLQSDEDTHDIDEKPDDSQEQLFFTESSKDGSLEEDDDSCGFFKKRHGPLLKDQDESCP
KVNSFLTRDKYDEGLYRFNSLNDLSQPISQNNESTLPYDLACTGGDFVLFPPALAGKLAA
SVHQATKAKPDEPEFHSAQSNKQKQVIEESSVYNQVSLPLVKSLMLKPFESQVEGYLSSQ
PTQNTIRKLSSENLNAKNNTNSACFCRKALEGVPVGKATILNTENLSSTPAPKYLKILPS
GLKYNARHPSTKVMKQMDIGVYFGLPPKRKEEKLLGESALEGINLNPVPSPNQKRSSQCK
RKAEKSLSDLEFDASTLHESQLSVELSSERSQRQKKRCRKSNSLQEGACQKRSDHLINTE
SEAVNLSKVKVFTKSAHGGLQRGNKKIPESSNVGGSRKKTCPFYKKIPGTGFTVDAFQYG
VVEGCTAYFLTHFHSDHYAGLSKHFTFPVYCSEITGNLLKNKLHVQEQYIHPLPLDTECI
VNGVKVVLLDANHCPGAVMILFYLPNGTVILHTGDFRADPSMERSLLADQKVHMLYLDTT
YCSPEYTFPSQQEVIRFAINTAFEAVTLNPHALVVCGTYSIGKEKVFLAIADVLGSKVGM
SQEKYKTLQCLNIPEINSLITTDMCSSLVHLLPMMQINFKGLQSHLKKCGGKYNQILAFR
PTGWTHSNKFTRIADVIPQTKGNISIYGIPYSEHSSYLEMKRFVQWLKPQKIIPTVNVGT
WKSRSTMEKYFREWKLEAGY
NT seq 3123 nt   +upstreamnt  +downstreamnt
atgttagaagacatttccgaagaagacatttgggaatacaaatctaaaagaaaaccaaaa
cgagttgatccaaataatggctctaaaaatattctaaaatctgttgaaaaagcaacagat
ggaaaataccagtcaaaacggagtagaaacagaaaaagagccgcagaagctaaagaggtg
aaggaccatgaagtgccccttggaaatgcaggttgtcagacttctgttgcttctagtcag
aattcaagttgtggagatggtattcagcagacccaagacaaggaaactactccaggaaaa
ctctgtagaactcaaaaaagccaacacgtgtccccaaagatacgtccagtttatgatgga
tactgtccaaattgccagatgcctttttcctcattgatagggcagacacctcgatggcat
gtttttgaatgtttggattctccaccacgctctgaaacagagtgtcctgatggtcttctg
tgtacctcaaccattccttttcattacaagagatacactcacttcctgctagctcaaagc
agggctggtgatcatccttttagcagcccatcacctgcgtcaggtggcagtttcagtgag
actaagtcaggcgtcctttgtagccttgaggaaagatggtcttcgtatcagaaccaaact
gataactcggtttcaaatgatcccttattgatgacacagtattttaaaaagtctccgtct
ctgactgaagccagtgaaaagatttctactcatatccaaacatcccaacaagctctacaa
tttacagattttgttgagaatgacaaactagtgggagttgctttgcgtcttgcaaacaac
tcagaacacataaatttgccattgccagaaaatgacttcagtgactgtgaaatctcctat
tctccacttcaaagtgatgaagacactcatgatatcgatgaaaaaccggatgattcacaa
gaacaactgttttttaccgaaagctcaaaagatggcagcctcgaagaagatgatgacagc
tgtggtttttttaaaaaacgacatggtcccttactgaaggaccaggatgagagctgcccc
aaagtgaacagcttcttaactcgggataagtatgatgaaggattgtatagattcaatagt
ctaaatgatttgtctcaacctatttctcaaaataatgagagtactttgccttatgatctg
gcatgtactggtggtgattttgtgttgtttccacctgcattggcagggaagcttgctgct
tctgttcatcaggcaactaaagcaaaacctgatgagccagaatttcactcagctcaatca
aataaacagaaacaggtaattgaagaatcatctgtttacaatcaagtttctcttccgtta
gttaagagtttaatgttgaaaccttttgaaagtcaggtagaagggtatctttcttcccaa
ccaacccaaaatacaattagaaaattatcaagtgagaacttgaatgctaagaataatact
aactcagcatgtttctgcagaaaggcattagagggtgtgccagttggtaaagctacaatt
ttaaatacagaaaacttgtctagtacacctgctccgaagtatttgaaaatattgccttct
ggtcttaagtataatgcaagacatccttctaccaaggtaatgaagcaaatggatataggt
gtgtattttggactacctcccaaaagaaaggaagagaaattgctaggggaaagtgcatta
gaagggataaacttaaatccagttccaagtcctaatcaaaagaggtcctcgcagtgcaag
aggaaagcagaaaaatctttaagtgatttagaatttgatgcaagtactttacatgagagt
cagctttctgtggaactttctagtgagaggtcacagcgtcaaaaaaagagatgtagaaag
tcaaattcactgcaggaaggagcgtgtcagaagagatcagatcaccttattaatacagaa
tctgaagcagtcaatttaagtaaagtcaaagtcttcacaaaatcagctcatggtgggctg
caaaggggcaacaagaaaatcccagagtcatctaatgtaggaggatcaagaaaaaagaca
tgtccattctataagaaaatacctggaaccggctttacagttgatgcctttcagtatggc
gtggttgaaggttgcacagcctattttctcacacattttcattctgatcattatgctgga
ttgtctaaacacttcacatttccagtttattgtagtgagataactggcaatttgttgaag
aacaagcttcatgtgcaagaacaatatattcacccattgccactggacactgaatgtatt
gtgaatggtgtcaaagttgttttgcttgatgccaatcactgtccaggtgctgtcatgatc
ctcttttatcttcctaatggtactgtcatattacacacgggagacttcagagcagatccc
agcatggaacgttctcttcttgcggaccagaaagtccatatgctgtacttagataccaca
tattgtagcccagaatacacctttccatctcagcaagaggttatccggtttgccatcaac
actgcctttgaggctgtaactctaaacccacatgctcttgttgtctgtggcacttactct
attggaaaagagaaagtcttcctagccattgctgatgttttaggttcaaaagtgggcatg
tcccaggaaaaatataaaactctacagtgcctcaatataccagaaattaattcactcatc
actaccgacatgtgcagttcattggttcaccttctcccaatgatgcaaattaattttaag
ggcttacagagtcatttgaagaagtgtggtgggaaatacaatcagattttggcatttcga
cctacaggatggacacactctaacaagttcactagaatagcagatgttattccccagacc
aaaggaaacatttcaatatatggaattccttacagtgaacacagcagctacctagaaatg
aagcgctttgtccagtggctgaagccccagaaaatcatacctactgtaaatgtgggcacc
tggaaatctaggagcacaatggagaaatattttagagagtggaaattggaagctggatat
tga

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