Homo sapiens (human): 256076
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Entry
256076 CDS
T01001
Symbol
COL6A5, COL29A1, VWA4
Name
(RefSeq) collagen type VI alpha 5 chain
KO
K06238
collagen type VI alpha
Organism
hsa
Homo sapiens (human)
Pathway
hsa04151
PI3K-Akt signaling pathway
hsa04510
Focal adhesion
hsa04512
ECM-receptor interaction
hsa04820
Cytoskeleton in muscle cells
hsa04974
Protein digestion and absorption
hsa05165
Human papillomavirus infection
Network
nt06539
Cytoskeleton in muscle cells
Element
N01814
Extracellular matrix - Basal lamina
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
256076 (COL6A5)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
256076 (COL6A5)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
256076 (COL6A5)
09142 Cell motility
04820 Cytoskeleton in muscle cells
256076 (COL6A5)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
256076 (COL6A5)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
256076 (COL6A5)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsa04147
]
256076 (COL6A5)
00536 Glycosaminoglycan binding proteins [BR:
hsa00536
]
256076 (COL6A5)
Exosome [BR:
hsa04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
256076 (COL6A5)
Glycosaminoglycan binding proteins [BR:
hsa00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
256076 (COL6A5)
Hyaluronan
Extracellular matrix or blood plasma proteins
256076 (COL6A5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VWA
VWA_2
Collagen
VWA_3
VWA_CoxE
Copine
vWA-TerF-like
DUF2529
Integrin_beta
Motif
Other DBs
NCBI-GeneID:
256076
NCBI-ProteinID:
NP_001265227
OMIM:
611916
HGNC:
26674
Ensembl:
ENSG00000172752
UniProt:
A8TX70
H0Y393
LinkDB
All DBs
Position
3:130345672..130484846
Genome browser
AA seq
2614 aa
AA seq
DB search
MKILLIIFVLIIWTETLADQSPGPGPVYADVVFLVDSSDHLGPKSFPFVKTFINKMINSL
PIEANKYRVALAQYSDEFHSEFHLSTFKGRSPMLNHLKKNFQFIGGSLQIGKALQEAHRT
YFSAPINGRDRKQFPPILVVLASAESEDEVEEASKALQKDGVKIISVGVQKASEENLKAM
ATSHFHFNLRTIRDLSTFSQNMTQIIKDVTKYKEGAVDADMQVHFPISCQKDSLADLVFL
VDESLGTGGNLRHLQTFLENITSSMDVKENCMRLGLMSYSNSAKTISFLKSSTTQSEFQQ
QIKNLSIQVGKSNTGAAIDQMRRDGFSESYGSRRAQGVPQIAVLVTHRPSDDEVHDAALN
LRLEDVNVFALSIQGANNTQLEEIVSYPPEQTISTLKSYADLETYSTKFLKKLQNEIWSQ
ISTYAEQRNLDKTGCVDTKEADIHFLIDGSSSIQEKQFEQIKRFMLEVTEMFSIGPDKVR
VGVVQYSDDTEVEFYITDYSNDIDLRKAIFNIKQLTGGTYTGKALDYILQIIKNGMKDRM
SKVPCYLIVLTDGMSTDRVVEPAKRLRAEQITVHAVGIGAANKIELQEIAGKEERVSFGQ
NFDALKSIKNEVVREICAEKGCEDMKADIMFLVDSSWSIGNENFRKMKIFMKNLLTKIQI
GADKTQIGVVQFSDKTKEEFQLNRYFTQQEISDAIDRMSLINEGTLTGKALNFVGQYFTH
SKGARLGAKKFLILITDGVAQDDVRDPARILRGKDVTIFSVGVYNANRSQLEEISGDSSL
VFHVENFDHLKALERKLIFRVCALHDCKRITLLDVVFVLDHSGSIKKQYQDHMINLTIHL
VKKADVGRDRVQFGALKYSDQPNILFYLNTYSNRSAIIENLRKRRDTGGNTYTAKALKHA
NALFTEEHGSRIKQNVKQMLIVITDGESHDHDQLNDTALELRNKGITIFAVGVGKANQKE
LEGMAGNKNNTIYVDNFDKLKDVFTLVQERMCTEAPEVCHLQEADVIFLCDGSDRVSNSD
FVTMTTFLSDLIDNFDIQSQRMKIGMAQFGSNYQSIIELKNSLTKTQWKTQIQNVSKSGG
FPRIDFALKKVSNMFNLHAGGRRNAGVPQTLVVITSGDPRYDVADAVKTLKDLGICVLVL
GIGDVYKEHLLPITGNSEKIITFQDFDKLKNVDVKKRIIREICQSCGKTNCFMDIVVGFD
ISTHVQGQPLFQGHPQLESYLPGILEDISSIKGVSCGAGTEAQVSLAFKVNSDQGFPAKF
QIYQKAVFDSLLQVNVSGPTHLNAQFLRSLWDTFKDKSASRGQVLLIFSDGLQSESNIML
ENQSDRLREAGLDALLVVSLNTTAHHEFSSFEFGKRFDYRTHLTIGMRELGKKLSQYLGN
IAERTCCCTFCKCPGIPGPHGTRGLQAMKGSQGLKGSRGHRGEDGNPGVRGDTGPQGDKG
IAGCPGAWGQKGLKGFSGPKGGHGDDGIDGLDGEEGCHGFPGIKGEKGDPGSQGSPGSRG
APGQYGEKGFPGDPGNPGQNNNIKGQKGSKGEQGRQGRSGQKGVQGSPSSRGSRGREGQR
GLRGVSGEPGNPGPTGTLGAEGLQGPQGSQGNPGRKGEKGSQGQKGPQGSPGLMGAKGST
GRPGLLGKKGEPGLPGDLGPVGQTGQRGRQGDSGIPGYGQMGRKGVKGPRGFPGDAGQKG
DIGNPGIPGGPGPKGFRGLALTVGLKGEEGSRGLPGPPGQRGIKGMAGQPVYSQCDLIRF
LREHSPCWKEKCPAYPTELVFALDNSYDVTEESFNKTRDIITSIVNDLNIRENNCPVGAR
VAMVSYNSGTSYLIRWSDYNRKKQLLQQLSQIKYQDTTEPRDVGNAMRFVTRNVFKRTYA
GANVRRVAVFFSNGQTASRSSIITATMEFSALDISPTVFAFDERVFLEAFGFDNTGTFQV
IPVPPNGENQTLERLRRCALCYDKCFPNACIREAFLPEDSYMDVVFLIDNSRNIAKDEFK
AVKALVSSVIDNFNIASDPLISDSGDRIALLSYSPWESSRRKMGTVKTEFDFITYDNQLL
MKNHIQTSFQQLNGEATIGRALLWTTENLFPETPYLRKHKVIFVVSAGENYERKEFVKMM
ALRAKCQGYVIFVISLGSTRKDDMEELASYPLDQHLIQLGRIHKPDLNYIAKFLKPFLYS
VRRGFNQYPPPMLEDACRLINLGGENIQNDGFQFVTELQEDFLGGNGFIGQELNSGRESP
FVKTEDNGSDYLVYLPSQMFEPQKLMINYEKDQKSAEIASLTSGHENYGRKEEPDHTYEP
GDVSLQEYYMDVAFLIDASQRVGSDEFKEVKAFITSVLDYFHIAPTPLTSTLGDRVAVLS
YSPPGYMPNTEECPVYLEFDLVTYNSIHQMKHHLQDSQQLNGDVFIGHALQWTIDNVFVG
TPNLRKNKVIFVISAGETNSLDKDVLRNVSLRAKCQGYSIFVFSFGPKHNDKELEELASH
PLDHHLVQLGRTHKPDWNYIIKFVKPFVHLIRRAINKYPTEDMKATCVNMTSPNPENGGT
ENTVLLLPGIYEIKTENGDLFDEFDSQAQHLLVLGNNHSSGSETATDLMQKLYLLFSTEK
LAMKDKEKAHLEEISALVVDKQQEKEDGEDTRSS
NT seq
7845 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttgctaattatatttgtcctaatcatttggactgaaacattggcagaccag
agcccagggccaggccctgtgtatgcagatgtcgtgtttctggtggacagctccgatcac
ctgggacctaagtcattcccattcgtgaaaacgttcatcaacaaaatgatcaacagtctc
cccatagaggccaacaaataccgtgtagccctggcccagtacagcgacgagtttcacagt
gaattccatctgagcaccttcaaaggcagaagccccatgctgaaccacctcaagaagaac
tttcagttcattggcgggtccctgcagataggaaaggctcttcaggaggctcataggacc
tacttctctgcacccataaatgggagagacaggaaacagtttcccccaattttggtggtc
ctggcttcggctgagtctgaggatgaagtggaagaggcttcgaaagccctgcagaaagac
ggggtgaaaattatctccgtgggggtgcagaaagcttctgaggaaaatctgaaggccatg
gccacatcccatttccatttcaaccttcggacaatcagagacctcagcacattttcccaa
aacatgacacagatcatcaaggatgtaaccaagtataaggagggagccgtcgatgctgat
atgcaagttcacttccccatatcctgtcagaaagattcactcgctgacctcgtgttcctg
gtggatgagtcacttgggaccggaggaaatttaaggcatcttcagaccttccttgagaac
attaccagctccatggatgtgaaggaaaattgcatgcgacttggactgatgagttacagc
aatagtgccaagactatttcttttcttaaatcaagcacaacccaatctgaatttcagcag
caaatcaagaatctttctatccaagttgggaaatccaatacaggggctgccattgatcag
atgagaagagacggcttctcagagtcatatggcagcagaagagcacaaggagtgcctcag
attgcagttctggtcacccacagaccatcagatgatgaggtgcatgatgctgcgctgaac
cttcgactggaggatgtaaacgtgtttgccttgagcatccaaggggctaacaatacccag
ttagaagaaatagtgtcttatcctccagaacagacaatttccacgctgaagtcctatgca
gacttagaaacttacagtacaaagttcctgaaaaagctccagaatgaaatatggtcccaa
atttctacttatgctgaacaaaggaatcttgataaaactggctgtgtggatacaaaagag
gctgatatccacttcctcattgatggctcaagcagcatccaggagaaacagtttgagcaa
atcaagagatttatgttggaagtgacagaaatgtttagcattggcccagacaaagtccga
gttggagttgtgcagtattcagatgacacagaagtggaattttatatcactgactattct
aatgatattgacttaagaaaggctatttttaacattaagcaactaactggtggaacttat
actgggaaagctctggattacatactgcaaataataaaaaatggaatgaaggatagaatg
agcaaggttccctgttacctcattgtgttgactgatgggatgtccacagacagagtcgtg
gaacctgctaagagactaagggctgagcaaatcactgttcatgcagttggcattggggca
gctaataaaatagaactgcaagaaattgctgggaaagaagaaagggttagctttgggcag
aactttgatgctttgaaaagcataaaaaatgaagtcgttcgtgaaatctgcgctgaaaaa
ggatgtgaagacatgaaggccgacatcatgtttctggtggacagttcttggagtatagga
aatgaaaattttaggaaaatgaaaatcttcatgaaaaacctgttaactaaaattcaaatt
ggtgcagacaaaacccagattggtgttgttcagttcagtgataaaactaaggaagagttc
cagcttaatagatattttacacagcaagaaatttctgatgcaatagatagaatgtctctc
atcaatgaaggcactttaactggaaaggcactaaattttgtaggtcaatacttcacccac
tccaagggggcccgtttgggggccaaaaaatttctcatcctcatcacagatggagtagcg
caggatgatgtgagagatcctgctagaattcttcggggcaaagatgtgaccatcttctct
gtaggagtatacaatgccaatagatctcagctagaagagatcagtggggatagcagccta
gtttttcatgttgagaacttcgatcatctaaaggcactagaaaggaaacttatctttcgt
gtgtgtgctctccatgattgtaaaaggattacactactagacgttgtgtttgtgctggat
cattcaggtagcataaaaaaacaatatcaagatcacatgattaacctaactatccatttg
gtgaagaaagcagatgttggcagggaccgagttcagtttggagccctcaaatactctgac
caacctaacatccttttctaccttaatacatactcgaacagatcagcaataattgagaat
ctgcggaagcgcagggacactggagggaacacctacactgccaaggctctcaagcacgca
aatgccctgtttacagaggaacatggcagccgcatcaagcaaaatgtgaagcagatgctg
attgtcatcaccgatggggaatcccatgaccatgatcagctcaatgacacagcattggaa
ctgagaaacaaaggcatcaccatctttgcagtgggtgtaggaaaggccaaccaaaaggaa
cttgagggtatggcagggaataaaaacaatactatctatgtagataattttgacaaactg
aaagatgttttcacacttgttcaagaacgtatgtgtactgaagcaccagaggtctgtcat
cttcaggaagctgacgtgattttcctttgcgatggctctgacagggtatctaattcagat
tttgtaaccatgacaactttcttgtcagacttaatcgataattttgacattcagtctcaa
agaatgaaaattggtatggctcaatttggaagcaactaccagagtattattgagttgaaa
aactctctgactaaaacccagtggaagactcaaattcagaatgtctccaagagcggtgga
tttccaagaattgactttgcccttaaaaaagtgagcaatatgtttaatctacatgctggt
gggagaagaaatgctggtgtcccccaaactttggttgttatcacatctggagatcctcgc
tatgatgtggcagatgcagtaaaaaccctgaaggaccttggaatttgtgtcctggttttg
ggcataggagatgtttataaggaacatctcctgccaataacaggcaattctgaaaaaata
atcacttttcaagactttgataaattaaagaatgtggatgtgaaaaaaagaatcatccgt
gaaatctgccagagctgtgggaaaaccaattgctttatggacatagtggttgggtttgac
atctccactcatgtgcaggggcagcctttgttccagggccacccccagctggaatcctac
ctcccaggcatcttagaagacatcagctctatcaagggggtgagctgtggggctggcaca
gaggcacaggtgagcttggcgtttaaggtgaacagtgaccaaggattccctgccaagttc
caaatctatcagaaagcagtgtttgacagcttgctgcaagtcaacgtcagtgggccaact
catctgaacgcacagttcttgcggtctctttgggacacatttaaggataaatctgcatcc
cggggccaggtgctgcttattttttcagacggtctccagagtgaaagcaacataatgctt
gaaaatcaatcagacaggctcagagaagcaggacttgatgctctgctggtagtgtccctt
aacacaactgctcatcatgagttttctagctttgaatttggaaaaagattcgattacagg
actcatctgactattggaatgagagaactgggcaaaaaactatcacagtacctgggaaat
attgcagagaggacttgctgctgtacattctgcaaatgtccaggaattccaggacctcat
gggacccgaggactacaagccatgaagggttctcaaggtctgaaaggcagcagaggacac
aggggagaggatggaaaccctggagtacgaggagacacaggaccccaaggagacaaaggg
attgcaggatgtccaggggcgtggggtcagaagggactcaaaggattttctggacctaag
ggaggtcatggagacgatgggattgatggacttgatggggaagagggctgtcatggattt
cctggaataaaaggagaaaaaggtgatccaggatctcagggcagcccaggttccagaggt
gcccctgggcagtatggagagaagggcttcccaggggatccgggtaatccaggacaaaac
aataacatcaaaggacaaaagggctccaaaggagaacaaggaagacaaggtagaagtgga
cagaaaggggtgcaaggcagtcctagttccagaggcagcaggggaagagaaggtcaaagg
ggactccgaggtgtctcaggagaaccaggaaatcctggacctacaggcacattgggagct
gaaggattacaaggcccacaggggtcacagggaaatcctggcagaaaaggagaaaaagga
agccaggggcagaaaggacctcagggttctcctgggctaatgggagctaaagggagcact
ggaagacctggacttttggggaaaaaaggagagcctggacttcctggagatctagggcca
gtggggcaaactgggcagcgaggaagacagggagattctggcatcccaggctacggtcag
atgggacgaaaaggagtaaagggcccaagaggattccctggagatgcggggcagaagggt
gatattggtaatcctggaattcctgggggacctggacccaaaggatttaggggactagca
ctcactgtaggcttgaaaggtgaagagggatctcgaggactcccaggccctcctggacag
agaggcattaaaggcatggcagggcagcctgtatattctcaatgtgatctgatccggttt
ttgcgggaacatagtccttgctggaaagaaaaatgtccagcatatccaacagagctagta
tttgctctggacaattcctacgatgtcacagaagagagctttaataaaacacgggacatc
atcacttccattgtcaatgaccttaacatcagggaaaataactgtcctgtgggagcaaga
gttgccatggtttcctataactcaggcaccagctatctcatccgctggtctgactacaat
aggaagaagcagctcctccagcagctttcccaaataaaatatcaagacaccacagagccc
cgagatgttggtaatgcaatgaggtttgtgacccgcaacgtgttcaagcggacgtatgca
ggagccaacgtgaggagagttgctgtgttttttagcaatggtcaaacagccagtaggtca
tccatcatcacggccaccatggagtttagtgccctggatatcagtccaacagtctttgct
tttgatgagagagttttccttgaagcttttgggtttgacaacactggaacatttcaggtg
attccagttcctccaaatggggaaaatcaaacattagaaagacttcggcgctgtgcactt
tgctatgataaatgttttccaaatgcttgcattcgagaggctttcttacctgaagattca
tacatggatgtagtcttcctcatagacaattctcggaatatagcaaaggatgagtttaag
gctgtgaaagccttggtgagctcagtgattgacaacttcaacattgcttcagacccttta
atctcagactctggtgataggattgctttgttgagctattctccttgggaaagttccagg
agaaagatgggtacagtaaaaacagagtttgatttcatcacttatgacaaccaactccta
atgaagaatcacatccagacttccttccaacagctaaatggagaagcaacaattggtcgt
gccctactgtggaccactgaaaatctttttccagaaacaccctatctaagaaaacacaag
gtcatctttgtggtctcagctggagaaaattatgagagaaaagaatttgtaaaaatgatg
gctttgagggctaagtgtcaaggctacgtcatatttgtgatttctctgggctctacacgt
aaggatgacatggaggagttagccagctacccacttgatcaacacctgatacagcttggg
agaatacataaaccagatctgaattatattgcgaagttcttaaagccatttttatactcg
gtcaggcggggattcaatcagtacccaccaccgatgcttgaggatgcctgtagactcatc
aatttaggaggagagaatattcaaaatgatggtttccaatttgttactgagctacaagag
gattttttgggaggtaatggcttcattggccaagaattaaattctgggagagaatcacct
tttgtaaagacggaagacaatggaagtgactatttggtttaccttccaagccaaatgttt
gagccacaaaaattaatgatcaattatgaaaaagatcaaaaatctgcagaaattgcaagt
ctcacttctggacatgaaaattatggcagaaaagaagaaccagatcatacttatgaacct
ggagatgtctctcttcaagaatattacatggatgtggctttcctcatagatgcttcccaa
agagtaggaagtgatgagtttaaggaagtaaaagcttttataacctcagtgcttgattac
tttcacattgcccccactccactgacctccaccttaggagacagggttgctgtcctgagc
tactctcctccaggctatatgcctaacactgaagaatgccctgtctacctggaatttgat
ttggttacttataacagtatacaccaaatgaaacatcatctccaagactctcaacagctc
aatggagatgtttttattggccatgccttgcagtggacaattgacaatgtctttgtagga
acccccaatctgaggaaaaacaaagttatctttgtaatatctgctggcgaaaccaactct
ttagacaaagacgtcttaaggaatgtgtctctgagagccaagtgtcaaggctactccata
tttgtgttttcctttggccctaaacacaatgacaaagaattagaagaattagccagccac
cctctggatcatcacttggtccaacttggccgaacccacaagccagattggaactatatc
atcaagtttgtcaagccatttgtccatttaatcagacgtgccatcaacaaatatcccacc
gaagatatgaaagccacatgtgttaacatgacctctcccaacccagagaacggtggcaca
gaaaacactgtattacttcttcctgggatatatgaaataaagacagaaaatggtgatctg
tttgatgaatttgattcccaggcacaacatctccttgtattagggaacaatcatagtagt
ggttctgagacagctactgatttgatgcagaagttatatctgctcttttcaactgagaaa
ctggcaatgaaagacaaggaaaaagcacatttagaagaaatttcagctctagtggttgat
aaacagcaagaaaaagaagatggtgaagatacaaggtcatcatag
DBGET
integrated database retrieval system