Homo sapiens (human): 3146
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Entry
3146 CDS
T01001
Symbol
HMGB1, HMG-1, HMG1, HMG3, SBP-1
Name
(RefSeq) high mobility group box 1
KO
K10802
high mobility group protein B1
Organism
hsa
Homo sapiens (human)
Pathway
hsa03410
Base excision repair
hsa04140
Autophagy - animal
hsa04217
Necroptosis
hsa04613
Neutrophil extracellular trap formation
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
3146 (HMGB1)
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
3146 (HMGB1)
09143 Cell growth and death
04217 Necroptosis
3146 (HMGB1)
09150 Organismal Systems
09151 Immune system
04613 Neutrophil extracellular trap formation
3146 (HMGB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
hsa03036
]
3146 (HMGB1)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
3146 (HMGB1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsa04147
]
3146 (HMGB1)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Nucleosome assembly factors
HMG (high mobility group) proteins
3146 (HMGB1)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
3146 (HMGB1)
MMR (mismatch excision repair)
Other MMR factors
3146 (HMGB1)
Exosome [BR:
hsa04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
3146 (HMGB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HMG_box_2
HMG_box
NOA36
HMG_box_5
Nop14
Motif
Other DBs
NCBI-GeneID:
3146
NCBI-ProteinID:
NP_001300821
OMIM:
163905
HGNC:
4983
Ensembl:
ENSG00000189403
UniProt:
P09429
Structure
PDB
LinkDB
All DBs
Position
13:complement(30456704..30617597)
Genome browser
AA seq
215 aa
AA seq
DB search
MGKGDPKKPRGKMSSYAFFVQTCREEHKKKHPDASVNFSEFSKKCSERWKTMSAKEKGKF
EDMAKADKARYEREMKTYIPPKGETKKKFKDPNAPKRPPSAFFLFCSEYRPKIKGEHPGL
SIGDVAKKLGEMWNNTAADDKQPYEKKAAKLKEKYEKDIAAYRAKGKPDAAKKGVVKAEK
SKKKKEEEEDEEDEEDEEEEEDEEDEDEEEDDDDE
NT seq
648 nt
NT seq
+upstream
nt +downstream
nt
atgggcaaaggagatcctaagaagccgagaggcaaaatgtcatcatatgcattttttgtg
caaacttgtcgggaggagcataagaagaagcacccagatgcttcagtcaacttctcagag
ttttctaagaagtgctcagagaggtggaagaccatgtctgctaaagagaaaggaaaattt
gaagatatggcaaaagcggacaaggcccgttatgaaagagaaatgaaaacctatatccct
cccaaaggggagacaaaaaagaagttcaaggatcccaatgcacccaagaggcctccttcg
gccttcttcctcttctgctctgagtatcgcccaaaaatcaaaggagaacatcctggcctg
tccattggtgatgttgcgaagaaactgggagagatgtggaataacactgctgcagatgac
aagcagccttatgaaaagaaggctgcgaagctgaaggaaaaatatgaaaaggatattgct
gcatatcgagctaaaggaaagcctgatgcagcaaaaaagggagttgtcaaggctgaaaaa
agcaagaaaaagaaggaagaggaggaagatgaggaagatgaagaggatgaggaggaggag
gaagatgaagaagatgaagatgaagaagaagatgatgatgatgaataa
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integrated database retrieval system