Homo sapiens (human): 6601
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Entry
6601 CDS
T01001
Symbol
SMARCC2, BAF170, CRACC2, CSS8, Rsc8
Name
(RefSeq) SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2
KO
K11649
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
hsa
Homo sapiens (human)
Pathway
hsa03082
ATP-dependent chromatin remodeling
hsa04714
Thermogenesis
hsa05225
Hepatocellular carcinoma
Network
nt06529
Thermogenesis
Element
N01688
ADRB3-UCP1 signaling pathway
Disease
H01403
Coffin-Siris syndrome
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
6601 (SMARCC2)
09150 Organismal Systems
09159 Environmental adaptation
04714 Thermogenesis
6601 (SMARCC2)
09160 Human Diseases
09162 Cancer: specific types
05225 Hepatocellular carcinoma
6601 (SMARCC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsa03021
]
6601 (SMARCC2)
03036 Chromosome and associated proteins [BR:
hsa03036
]
6601 (SMARCC2)
Transcription machinery [BR:
hsa03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
6601 (SMARCC2)
Chromosome and associated proteins [BR:
hsa03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
6601 (SMARCC2)
PBAF complex
6601 (SMARCC2)
GBAF(ncBAF) complex
6601 (SMARCC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SWIRM-assoc_2
SWIRM-assoc_3
SWIRM-assoc_1
SWIRM
Myb_DNA-binding
Myb_DNA-bind_6
Chromo
CD99L2
Motif
Other DBs
NCBI-GeneID:
6601
NCBI-ProteinID:
NP_003066
OMIM:
601734
HGNC:
11105
Ensembl:
ENSG00000139613
UniProt:
Q8TAQ2
Structure
PDB
LinkDB
All DBs
Position
12:complement(56162359..56189483)
Genome browser
AA seq
1214 aa
AA seq
DB search
MAVRKKDGGPNVKYYEAADTVTQFDNVRLWLGKNYKKYIQAEPPTNKSLSSLVVQLLQFQ
EEVFGKHVSNAPLTKLPIKCFLDFKAGGSLCHILAAAYKFKSDQGWRRYDFQNPSRMDRN
VEMFMTIEKSLVQNNCLSRPNIFLCPEIEPKLLGKLKDIIKRHQGTVTEDKNNASHVVYP
VPGNLEEEEWVRPVMKRDKQVLLHWGYYPDSYDTWIPASEIEASVEDAPTPEKPRKVHAK
WILDTDTFNEWMNEEDYEVNDDKNPVSRRKKISAKTLTDEVNSPDSDRRDKKGGNYKKRK
RSPSPSPTPEAKKKNAKKGPSTPYTKSKRGHREEEQEDLTKDMDEPSPVPNVEEVTLPKT
VNTKKDSESAPVKGGTMTDLDEQEDESMETTGKDEDENSTGNKGEQTKNPDLHEDNVTEQ
THHIIIPSYAAWFDYNSVHAIERRALPEFFNGKNKSKTPEIYLAYRNFMIDTYRLNPQEY
LTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQVDAESRPTPMGPPPTSHFHVLADTPSG
LVPLQPKTPQQTSASQQMLNFPDKGKEKPTDMQNFGLRTDMYTKKNVPSKSKAAASATRE
WTEQETLLLLEALEMYKDDWNKVSEHVGSRTQDECILHFLRLPIEDPYLEDSEASLGPLA
YQPIPFSQSGNPVMSTVAFLASVVDPRVASAAAKSALEEFSKMKEEVPTALVEAHVRKVE
EAAKVTGKADPAFGLESSGIAGTTSDEPERIEESGNDEARVEGQATDEKKEPKEPREGGG
AIEEEAKEKTSEAPKKDEEKGKEGDSEKESEKSDGDPIVDPEKEKEPKEGQEEVLKEVVE
SEGERKTKVERDIGEGNLSTAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLE
IKLRHFEELETIMDREREALEYQRQQLLADRQAFHMEQLKYAEMRARQQHFQQMHQQQQQ
PPPALPPGSQPIPPTGAAGPPAVHGLAVAPASVVPAPAGSGAPPGSLGPSEQIGQAGSTA
GPQQQQPAGAPQPGAVPPGVPPPGPHGPSPFPNQQTPPSMMPGAVPGSGHPGVAGNAPLG
LPFGMPPPPPPPAPSIIPFGSLADSISINLPAPPNLHGHHHHLPFAPGTLPPPNLPVSMA
NPLHPNLPATTTMPSSLPLGPGLGSAAAQSPAIVAAVQGNLLPSASPLPDPGTPLPPDPT
APSPGTVTPVPPPQ
NT seq
3645 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcggaagaaggacggcggccccaacgtgaagtactacgaggccgcggacacc
gtgacccagttcgacaacgtgcggctgtggctcggcaagaactacaagaagtatatacaa
gctgaaccacccaccaacaagtccctgtctagcctggttgtacagttgctacaatttcag
gaagaagtttttggcaaacatgtcagcaatgcaccgctcactaaactgccgatcaaatgt
ttcctagatttcaaagcgggaggctccttgtgccacattcttgcagctgcctacaaattc
aagagtgaccagggatggcggcgttacgatttccagaatccatcacgcatggaccgcaat
gtggaaatgtttatgaccattgagaagtccttggtgcagaataattgcctgtctcgacct
aacatttttctgtgcccagaaattgagcccaaactactagggaaattaaaggacattatc
aagagacaccagggaacagtcactgaggataagaacaatgcctcccatgttgtgtatcct
gtcccggggaatctagaagaagaggaatgggtacgaccagtcatgaagagggataagcag
gttcttctgcactggggctactatcctgacagttacgacacgtggatcccagcgagtgaa
attgaggcatctgtggaagatgctccaactcctgagaaacctaggaaggttcatgcaaag
tggatcctggacaccgacaccttcaatgaatggatgaatgaggaagactatgaagtaaat
gatgacaaaaaccctgtctcccgccgaaagaagatttcagccaagacactgacagatgag
gtgaacagcccagattcagatcgacgggacaagaaggggggaaactataagaagaggaag
cgctccccctctccttcaccaaccccagaagcaaagaagaaaaatgctaagaaaggtccc
tcaacaccttacactaagtcaaagcgtggccacagagaagaggagcaagaagacctgaca
aaggacatggacgagccctcaccagtccccaatgtagaagaggtgacacttcccaaaaca
gtcaacacaaagaaagactcagagtcggccccagtcaaaggcggcaccatgaccgacctg
gatgaacaggaagatgaaagcatggagacgacgggcaaggatgaggatgagaacagtacg
gggaacaagggagagcagaccaagaatccagacctgcatgaggacaatgtgactgaacag
acccaccacatcatcattcccagctacgctgcctggtttgactacaatagtgttcatgcc
attgagcggagggctctccccgagttcttcaacggcaagaacaagtccaagactccagag
atctacctggcctatcgaaactttatgattgacacttaccgactgaacccccaagagtat
cttacctctaccgcctgccgccgaaacctagcgggtgatgtctgtgccatcatgagggtc
catgccttcctagaacagtggggtcttattaactaccaggtggatgctgagagtcgacca
accccaatggggcctccgcctacctctcacttccatgtcttggctgacacaccatcaggg
ctggtgcctctgcagcccaagacacctcagcagacctctgcttcccaacaaatgctcaac
tttcctgacaaaggcaaagagaaaccaacagacatgcaaaactttgggctgcgcacagac
atgtacacaaaaaagaatgttccctccaagagcaaggctgcagccagtgccactcgtgag
tggacagaacaggaaaccctgcttctcctggaggcactggaaatgtacaaagatgactgg
aacaaagtgtccgagcatgtgggaagccgcacacaggacgagtgcatcttgcattttctt
cgtcttcccattgaagacccatacctggaggactcagaggcctccctaggccccctggcc
taccaacccatccccttcagtcagtcgggcaaccctgttatgagcactgttgccttcctg
gcctctgtcgtcgatccccgagtcgcctctgctgctgcaaagtcagccctagaggagttc
tccaaaatgaaggaagaggtacccacggccttggtggaggcccatgttcgaaaagtggaa
gaagcagccaaagtaacaggcaaggcggaccctgccttcggtctggaaagcagtggcatt
gcaggaaccacctctgatgagcctgagcggattgaggagagcgggaatgacgaggctcgg
gtggaaggccaggccacagatgagaagaaggagcccaaggaaccccgagaaggagggggt
gctatagaggaggaagcaaaagagaaaaccagcgaggctcccaagaaggatgaggagaaa
gggaaagaaggcgacagtgagaaggagtccgagaagagtgatggagacccaatagtcgat
cctgagaaggagaaggagccaaaggaagggcaggaggaagtgctgaaggaagtggtggag
tctgagggggaaaggaagacaaaggtggagcgggacattggcgagggcaacctctccacc
gctgctgccgccgccctggccgccgccgcagtgaaagctaagcacttggctgctgttgag
gaaaggaagatcaaatctttggtggccctgctggtggagacccagatgaaaaagttggag
atcaaacttcggcactttgaggagctggagactatcatggaccgggagcgagaagcactg
gagtatcagaggcagcagctcctggccgacagacaagccttccacatggagcagctgaag
tatgcggagatgagggctcggcagcagcacttccaacagatgcaccaacagcagcagcag
ccaccaccagccctgcccccaggctcccagcctatccccccaacaggggctgctgggcca
cccgcagtccatggcttggctgtggctccagcctctgtagtccctgctcctgctggcagt
ggggcccctccaggaagtttgggcccttctgaacagattgggcaggcagggtcaactgca
gggccacagcagcagcaaccagctggagccccccagcctggggcagtcccaccaggggtt
cccccccctggaccccatggcccctcaccgttccccaaccaacaaactcctccctcaatg
atgccaggggcagtgccaggcagcgggcacccaggcgtggcgggtaatgctcctttgggt
ttgccttttggcatgccgcctcctcctcctcctcctgctccatccatcatcccatttggt
agtctagctgactccatcagtattaacctccccgctcctcctaacctgcatgggcatcac
caccatctcccgttcgccccgggcactctccccccacctaacctgcctgtgtccatggcg
aaccctctacatcctaacctgccggcgaccaccaccatgccatcttccttgcctctcggg
ccggggctcggatccgccgcagcccaaagccctgccattgtggcagctgttcagggcaac
ctcctgcccagtgccagcccactgccagacccaggcacccccctgcctccagaccccaca
gccccgagcccaggcacggtcacccctgtgccacctccacagtga
DBGET
integrated database retrieval system
