KEGG   Homo sapiens (human): 9025
Entry
9025              CDS       T01001                                 
Symbol
RNF8, hRNF8
Name
(RefSeq) ring finger protein 8
  KO
K10667  E3 ubiquitin-protein ligase RNF8 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Network
nt06506  Double-strand break repair
  Element
N01439  Double-strand break signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    9025 (RNF8)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    9025 (RNF8)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     9025 (RNF8)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    9025 (RNF8)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     9025 (RNF8)
SSDB
Motif
Pfam: FHA zf-C3HC4_3 zf-C3HC4 zf-C3HC4_2 zf-RING_2 zf-RING_UBOX zf-C3HC4_4 zf-rbx1 zf-RING_5 Prok-RING_4 Yop-YscD_cpl zf-ANAPC11 zf-RING_6 zf-RING_10 Peptidase_S76 DUF6594
Other DBs
NCBI-GeneID: 9025
NCBI-ProteinID: NP_003949
OMIM: 611685
HGNC: 10071
Ensembl: ENSG00000112130
UniProt: O76064
Structure
LinkDB
Position
6:37353983..37394734
AA seq 485 aa
MGEPGFFVTGDRAGGRSWCLRRVGMSAGWLLLEDGCEVTVGRGFGVTYQLVSKICPLMIS
RNHCVLKQNPEGQWTIMDNKSLNGVWLNRARLEPLRVYSIHQGDYIQLGVPLENKENAEY
EYEVTEEDWETIYPCLSPKNDQMIEKNKELRTKRKFSLDELAGPGAEGPSNLKSKINKVS
CESGQPVKSQGKGEVASTPSDNLDPKLTALEPSKTTGAPIYPGFPKVTEVHHEQKASNSS
ASQRSLQMFKVTMSRILRLKIQMQEKHEAVMNVKKQTQKGNSKKVVQMEQELQDLQSQLC
AEQAQQQARVEQLEKTFQEEEQHLQGLEIAQGEKDLKQQLAQALQEHWALMEELNRSKKD
FEAIIQAKNKELEQTKEEKEKMQAQKEEVLSHMNDVLENELQCIICSEYFIEAVTLNCAH
SFCSYCINEWMKRKIECPICRKDIKSKTYSLVLDNCINKMVNNLSSEVKERRIVLIRERK
AKRLF
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgggggagcccggcttcttcgtcacaggagaccgcgccggtggccggagctggtgcctg
cggcgggtggggatgagcgccgggtggctgctgctggaagatgggtgcgaggtgactgta
ggacgaggatttggtgtcacataccaactggtatcaaaaatctgccccctgatgatttct
cgaaaccactgtgttttgaagcagaatcctgagggccaatggacaattatggacaacaag
agtctaaatggtgtttggctgaacagagcgcgtctggaacctttaagggtctattccatt
catcagggagactacatccaacttggagtgcctctggaaaataaggagaatgcggagtat
gaatatgaagttactgaagaagactgggagacaatatatccttgtctttccccaaagaat
gaccaaatgatagaaaaaaataaggaattgagaactaaaaggaaattcagtttggatgaa
ttagcaggtcctggagctgaaggcccctcaaatttgaaatccaaaataaataaagtgtct
tgtgaatctggtcagccagtgaaatcacaggggaaaggtgaagtggccagtacaccctct
gacaatttggatcctaagttgactgcccttgagccaagtaagaccacaggggctcccatt
taccctggcttccccaaagtcacagaggttcatcatgagcagaaagcctcaaactcttca
gcatctcagagaagcttacagatgtttaaggtgaccatgtccaggattctgaggctcaaa
atacagatgcaggaaaaacatgaagccgttatgaatgtgaaaaagcagacccaaaagggg
aactcaaagaaagttgtgcaaatggagcaggaacttcaggacttacagtcccagctgtgt
gcagagcaggctcagcagcaggcaagagtggagcaactagagaagactttccaggaagag
gaacagcatcttcagggtttggagatagcccaaggagaaaaggacctgaagcaacagctg
gcccaggctctgcaggagcattgggctctaatggaagagctaaatcgcagcaagaaggac
tttgaagcaatcattcaagccaagaacaaagaattagagcagaccaaggaagagaaggag
aagatgcaagcacagaaggaagaagttcttagccacatgaatgatgtgctagagaatgag
ctccaatgtattatttgttcagaatacttcattgaggctgtcaccttgaactgtgcccac
agtttctgctcctactgtatcaatgaatggatgaagcggaagatagaatgccccatttgt
cggaaggacattaagtccaaaacgtactctttggttctggacaattgcattaataagatg
gtaaataatctgagctcagaagtgaaagaacgacgaattgttctcattagggaacgaaaa
gcaaagagattgttctga

KEGG   Homo sapiens (human): 8924
Entry
8924              CDS       T01001                                 
Symbol
HERC2, D15F37S1, MRT38, SHEP1, jdf2, p528
Name
(RefSeq) HECT and RLD domain containing E3 ubiquitin protein ligase 2
  KO
K10595  E3 ubiquitin-protein ligase HERC2 [EC:2.3.2.26]
Organism
hsa  Homo sapiens (human)
Pathway
hsa04120  Ubiquitin mediated proteolysis
Network
nt06506  Double-strand break repair
  Element
N01439  Double-strand break signaling
Disease
H00768  Autosomal recessive intellectual developmental disorder
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    8924 (HERC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    8924 (HERC2)
   03036 Chromosome and associated proteins [BR:hsa03036]
    8924 (HERC2)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    8924 (HERC2)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.26  HECT-type E3 ubiquitin transferase
     8924 (HERC2)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  HECT type E3
   8924 (HERC2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Centrosome formation proteins
   Other centriole associated proteins
    8924 (HERC2)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   Other DSBR factors
    Ubiquitin ligases
     8924 (HERC2)
SSDB
Motif
Pfam: RCC1 RCC1_2 HECT Cul7 MIB_HERC2 Cyt-b5 ZZ ANAPC10 SH3_15
Other DBs
NCBI-GeneID: 8924
NCBI-ProteinID: NP_004658
OMIM: 605837
HGNC: 4868
Ensembl: ENSG00000128731
UniProt: O95714 A8KAQ8
Structure
LinkDB
Position
15:complement(28111040..28322179)
AA seq 4834 aa
MPSESFCLAAQARLDSKWLKTDIQLAFTRDGLCGLWNEMVKDGEIVYTGTESTQNGELPP
RKDDSVEPSGTKKEDLNDKEKKDEEETPAPIYRAKSILDSWVWGKQPDVNELKECLSVLV
KEQQALAVQSATTTLSALRLKQRLVILERYFIALNRTVFQENVKVKWKSSGISLPPVDKK
SSRPAGKGVEGLARVGSRAALSFAFAFLRRAWRSGEDADLCSELLQESLDALRALPEASL
FDESTVSSVWLEVVERATRFLRSVVTGDVHGTPATKGPGSIPLQDQHLALAILLELAVQR
GTLSQMLSAILLLLQLWDSGAQETDNERSAQGTSAPLLPLLQRFQSIICRKDAPHSEGDM
HLLSGPLSPNESFLRYLTLPQDNELAIDLRQTAVVVMAHLDRLATPCMPPLCSSPTSHKG
SLQEVIGWGLIGWKYYANVIGPIQCEGLANLGVTQIACAEKRFLILSRNGRVYTQAYNSD
TLAPQLVQGLASRNIVKIAAHSDGHHYLALAATGEVYSWGCGDGGRLGHGDTVPLEEPKV
ISAFSGKQAGKHVVHIACGSTYSAAITAEGELYTWGRGNYGRLGHGSSEDEAIPMLVAGL
KGLKVIDVACGSGDAQTLAVTENGQVWSWGDGDYGKLGRGGSDGCKTPKLIEKLQDLDVV
KVRCGSQFSIALTKDGQVYSWGKGDNQRLGHGTEEHVRYPKLLEGLQGKKVIDVAAGSTH
CLALTEDSEVHSWGSNDQCQHFDTLRVTKPEPAALPGLDTKHIVGIACGPAQSFAWSSCS
EWSIGLRVPFVVDICSMTFEQLDLLLRQVSEGMDGSADWPPPQEKECVAVATLNLLRLQL
HAAISHQVDPEFLGLGLGSILLNSLKQTVVTLASSAGVLSTVQSAAQAVLQSGWSVLLPT
AEERARALSALLPCAVSGNEVNISPGRRFMIDLLVGSLMADGGLESALHAAITAEIQDIE
AKKEAQKEKEIDEQEANASTFHRSRTPLDKDLINTGICESSGKQCLPLVQLIQQLLRNIA
SQTVARLKDVARRISSCLDFEQHSRERSASLDLLLRFQRLLISKLYPGESIGQTSDISSP
ELMGVGSLLKKYTALLCTHIGDILPVAASIASTSWRHFAEVAYIVEGDFTGVLLPELVVS
IVLLLSKNAGLMQEAGAVPLLGGLLEHLDRFNHLAPGKERDDHEELAWPGIMESFFTGQN
CRNNEEVTLIRKADLENHNKDGGFWTVIDGKVYDIKDFQTQSLTGNSILAQFAGEDPVVA
LEAALQFEDTRESMHAFCVGQYLEPDQEIVTIPDLGSLSSPLIDTERNLGLLLGLHASYL
AMSTPLSPVEIECAKWLQSSIFSGGLQTSQIHYSYNEEKDEDHCSSPGGTPASKSRLCSH
RRALGDHSQAFLQAIADNNIQDHNVKDFLCQIERYCRQCHLTTPIMFPPEHPVEEVGRLL
LCCLLKHEDLGHVALSLVHAGALGIEQVKHRTLPKSVVDVCRVVYQAKCSLIKTHQEQGR
SYKEVCAPVIERLRFLFNELRPAVCNDLSIMSKFKLLSSLPRWRRIAQKIIRERRKKRVP
KKPESTDDEEKIGNEESDLEEACILPHSPINVDKRPIAIKSPKDKWQPLLSTVTGVHKYK
WLKQNVQGLYPQSPLLSTIAEFALKEEPVDVEKMRKCLLKQLERAEVRLEGIDTILKLAS
KNFLLPSVQYAMFCGWQRLIPEGIDIGEPLTDCLKDVDLIPPFNRMLLEVTFGKLYAWAV
QNIRNVLMDASAKFKELGIQPVPLQTITNENPSGPSLGTIPQARFLLVMLSMLTLQHGAN
NLDLLLNSGMLALTQTALRLIGPSCDNVEEDMNASAQGASATVLEETRKETAPVQLPVSG
PELAAMMKIGTRVMRGVDWKWGDQDGPPPGLGRVIGELGEDGWIRVQWDTGSTNSYRMGK
EGKYDLKLAELPAAAQPSAEDSDTEDDSEAEQTERNIHPTAMMFTSTINLLQTLCLSAGV
HAEIMQSEATKTLCGLLRMLVESGTTDKTSSPNRLVYREQHRSWCTLGFVRSIALTPQVC
GALSSPQWITLLMKVVEGHAPFTATSLQRQILAVHLLQAVLPSWDKTERARDMKCLVEKL
FDFLGSLLTTCSSDVPLLRESTLRRRRVRPQASLTATHSSTLAEEVVALLRTLHSLTQWN
GLINKYINSQLRSITHSFVGRPSEGAQLEDYFPDSENPEVGGLMAVLAVIGGIDGRLRLG
GQVMHDEFGEGTVTRITPKGKITVQFSDMRTCRVCPLNQLKPLPAVAFNVNNLPFTEPML
SVWAQLVNLAGSKLEKHKIKKSTKQAFAGQVDLDLLRCQQLKLYILKAGRALLSHQDKLR
QILSQPAVQETGTVHTDDGAVVSPDLGDMSPEGPQPPMILLQQLLASATQPSPVKAIFDK
QELEAAALAVCQCLAVESTHPSSPGFEDCSSSEATTPVAVQHIRPARVKRRKQSPVPALP
IVVQLMEMGFSRRNIEFALKSLTGASGNASSLPGVEALVGWLLDHSDIQVTELSDADTVS
DEYSDEEVVEDVDDAAYSMSTGAVVTESQTYKKRADFLSNDDYAVYVRENIQVGMMVRCC
RAYEEVCEGDVGKVIKLDRDGLHDLNVQCDWQQKGGTYWVRYIHVELIGYPPPSSSSHIK
IGDKVRVKASVTTPKYKWGSVTHQSVGVVKAFSANGKDIIVDFPQQSHWTGLLSEMELVP
SIHPGVTCDGCQMFPINGSRFKCRNCDDFDFCETCFKTKKHNTRHTFGRINEPGQSAVFC
GRSGKQLKRCHSSQPGMLLDSWSRMVKSLNVSSSVNQASRLIDGSEPCWQSSGSQGKHWI
RLEIFPDVLVHRLKMIVDPADSSYMPSLVVVSGGNSLNNLIELKTININPSDTTVPLLND
CTEYHRYIEIAIKQCRSSGIDCKIHGLILLGRIRAEEEDLAAVPFLASDNEEEEDEKGNS
GSLIRKKAAGLESAATIRTKVFVWGLNDKDQLGGLKGSKIKVPSFSETLSALNVVQVAGG
SKSLFAVTVEGKVYACGEATNGRLGLGISSGTVPIPRQITALSSYVVKKVAVHSGGRHAT
ALTVDGKVFSWGEGDDGKLGHFSRMNCDKPRLIEALKTKRIRDIACGSSHSAALTSSGEL
YTWGLGEYGRLGHGDNTTQLKPKMVKVLLGHRVIQVACGSRDAQTLALTDEGLVFSWGDG
DFGKLGRGGSEGCNIPQNIERLNGQGVCQIECGAQFSLALTKSGVVWTWGKGDYFRLGHG
SDVHVRKPQVVEGLRGKKIVHVAVGALHCLAVTDSGQVYAWGDNDHGQQGNGTTTVNRKP
TLVQGLEGQKITRVACGSSHSVAWTTVDVATPSVHEPVLFQTARDPLGASYLGVPSDADS
SAASNKISGASNSKPNRPSLAKILLSLDGNLAKQQALSHILTALQIMYARDAVVGALMPA
AMIAPVECPSFSSAAPSDASAMASPMNGEECMLAVDIEDRLSPNPWQEKREIVSSEDAVT
PSAVTPSAPSASARPFIPVTDDLGAASIIAETMTKTKEDVESQNKAAGPEPQALDEFTSL
LIADDTRVVVDLLKLSVCSRAGDRGRDVLSAVLSGMGTAYPQVADMLLELCVTELEDVAT
DSQSGRLSSQPVVVESSHPYTDDTSTSGTVKIPGAEGLRVEFDRQCSTERRHDPLTVMDG
VNRIVSVRSGREWSDWSSELRIPGDELKWKFISDGSVNGWGWRFTVYPIMPAAGPKELLS
DRCVLSCPSMDLVTCLLDFRLNLASNRSIVPRLAASLAACAQLSALAASHRMWALQRLRK
LLTTEFGQSININRLLGENDGETRALSFTGSALAALVKGLPEALQRQFEYEDPIVRGGKQ
LLHSPFFKVLVALACDLELDTLPCCAETHKWAWFRRYCMASRVAVALDKRTPLPRLFLDE
VAKKIRELMADSENMDVLHESHDIFKREQDEQLVQWMNRRPDDWTLSAGGSGTIYGWGHN
HRGQLGGIEGAKVKVPTPCEALATLRPVQLIGGEQTLFAVTADGKLYATGYGAGGRLGIG
GTESVSTPTLLESIQHVFIKKVAVNSGGKHCLALSSEGEVYSWGEAEDGKLGHGNRSPCD
RPRVIESLRGIEVVDVAAGGAHSACVTAAGDLYTWGKGRYGRLGHSDSEDQLKPKLVEAL
QGHRVVDIACGSGDAQTLCLTDDDTVWSWGDGDYGKLGRGGSDGCKVPMKIDSLTGLGVV
KVECGSQFSVALTKSGAVYTWGKGDYHRLGHGSDDHVRRPRQVQGLQGKKVIAIATGSLH
CVCCTEDGEVYTWGDNDEGQLGDGTTNAIQRPRLVAALQGKKVNRVACGSAHTLAWSTSK
PASAGKLPAQVPMEYNHLQEIPIIALRNRLLLLHHLSELFCPCIPMFDLEGSLDETGLGP
SVGFDTLRGILISQGKEAAFRKVVQATMVRDRQHGPVVELNRIQVKRSRSKGGLAGPDGT
KSVFGQMCAKMSSFGPDSLLLPHRVWKVKFVGESVDDCGGGYSESIAEICEELQNGLTPL
LIVTPNGRDESGANRDCYLLSPAARAPVHSSMFRFLGVLLGIAIRTGSPLSLNLAEPVWK
QLAGMSLTIADLSEVDKDFIPGLMYIRDNEATSEEFEAMSLPFTVPSASGQDIQLSSKHT
HITLDNRAEYVRLAINYRLHEFDEQVAAVREGMARVVPVPLLSLFTGYELETMVCGSPDI
PLHLLKSVATYKGIEPSASLIQWFWEVMESFSNTERSLFLRFVWGRTRLPRTIADFRGRD
FVIQVLDKYNPPDHFLPESYTCFFLLKLPRYSCKQVLEEKLKYAIHFCKSIDTDDYARIA
LTGEPAADDSSDDSDNEDVDSFASDSTQDYLTGH
NT seq 14505 nt   +upstreamnt  +downstreamnt
atgccctctgaatctttctgtttggctgcccaggctcgcctcgactccaaatggttgaaa
acagatatacagcttgcattcacaagagatgggctctgtggtctgtggaatgaaatggtt
aaagatggagaaattgtatacactggaacagaatcaacccagaacggagagctccctcct
agaaaagatgatagtgtcgaaccaagtggaacaaagaaagaagatctgaatgacaaagag
aaaaaagatgaagaagaaactcctgcacctatatatagggccaagtcaattctggacagc
tgggtatggggcaagcaaccagatgtgaatgaactgaaggagtgtctttctgtgctggtt
aaagagcagcaggccctggccgtccagtcagccaccaccaccctctcagccctgcgactc
aagcagaggctggtgatcttggagcgctatttcattgccttgaatagaaccgtttttcag
gagaatgtcaaagttaagtggaaaagcagcggtatttctctgcctcctgtggacaaaaaa
agttcccggcctgcgggcaaaggtgtggaggggctcgccagagtgggatcccgagcggcg
ctgtcttttgcctttgccttcctgcgcagggcctggcgatcaggcgaggatgcggacctc
tgcagtgagctgttgcaggagtccctggacgccctgcgagcacttcccgaggcctcgctc
tttgacgagagcaccgtgtcctctgtgtggctggaggtggtggagagagcgaccaggttc
ctcaggtccgtcgtgacgggggatgttcacggaacgccagccaccaaagggccaggaagc
atccccctgcaggaccagcacttggccctggccatcctgctggagctggctgtgcagaga
ggcacgctgagccaaatgttgtctgccatcctgttgttgcttcagctgtgggacagcggg
gcacaggagactgacaatgagcgttccgcccagggcaccagcgccccacttttgcccttg
ctgcaaaggttccagagcatcatttgcaggaaggatgcaccccactccgagggcgacatg
caccttttgtctggccctctgagccccaatgagagtttcctgaggtacctcacccttcca
caagacaacgagcttgccattgatctgcgacaaacggcggttgttgtcatggcccattta
gaccgtctggctacgccctgtatgcctccgctgtgtagctctccgacatctcataaggga
tcattgcaagaggtcataggttgggggttaataggatggaaatactatgccaatgtgatt
ggtccaatccagtgcgaaggcctggccaacctgggagtcacacagattgcctgtgcagag
aagcgtttcctgattctgtcacgcaatggccgcgtgtacacacaggcctataatagtgac
acgctggccccacagctggtccaaggccttgcctccagaaacattgtaaaaattgctgcc
cattctgatggtcaccactacctagccttggctgctactggagaggtgtactcctggggc
tgtggggacggcggacggctgggccatggggacactgtgcctttggaggagcctaaggtg
atctccgccttctctggaaagcaggccgggaagcacgtggtgcacatcgcttgcgggagc
acttacagtgcggccatcactgccgagggggagctgtacacctggggccgcgggaactac
ggccggctgggccatggctccagtgaggacgaggccattccgatgctggtagccgggctt
aaaggactgaaggtcatcgatgtggcgtgtgggagtggggatgctcaaaccctggctgtc
actgagaacgggcaagtgtggtcttggggagatggtgactatgggaaattgggcagaggt
ggtagtgatggctgcaaaaccccaaagctgattgaaaagcttcaagacttggatgtggtc
aaagtccgctgtggaagtcagttttccattgctttgacgaaagatggccaagtttattca
tggggaaaaggtgacaaccagagacttggacatggaacagaggaacatgttcgttatcca
aaactcttagaaggcttgcaagggaagaaggtgattgatgtggctgcaggctccacccac
tgcctggctctgactgaggacagcgaggtccacagctgggggagcaacgaccagtgccag
cactttgacaccttgcgcgtgaccaagccagaacctgcagcattgccaggactggacacc
aaacacatagtgggaattgcctgtgggcctgcccagagctttgcttggtcatcatgttct
gagtggtccattggcctccgtgtcccttttgtggtggacatctgctcaatgacttttgag
cagctggatctcctgcttcggcaggtgagtgaggggatggatggttccgcggactggccc
ccgccccaggagaaagagtgtgtggccgtggcaacgctgaatcttctacgacttcagttg
catgctgccattagtcaccaggttgacccggaattccttggtttaggtctgggcagcatc
ctcctgaacagcctgaagcagacggtggtgaccctggccagcagtgcgggcgtgctgagc
accgtgcagtcggccgcccaggccgtgctgcagagtggctggtccgtgctgctgcccacc
gcggaggagcgggcccgggcactctctgctctcctgccctgcgcagtttcaggcaatgaa
gtgaacataagtccaggtcgtcgattcatgattgatcttctggtgggcagcttgatggct
gatggagggttggagtcagccttacacgcagccattactgcagagatccaggatattgaa
gccaaaaaagaagcacagaaggaaaaagaaattgatgaacaggaagcgaatgcctcaaca
tttcatagaagcaggactccactggataaagaccttattaatacggggatctgtgagtct
tctggcaaacagtgtttgcctctggttcagctcatacaacagcttcttagaaacattgct
tctcagactgtagccagattgaaagatgttgcccgtcggatttcatcatgtctggacttt
gagcaacacagtcgtgaaagatctgcttcattggatttgttactgcgttttcaacgtttg
cttattagtaaactttatccaggagaaagtattggtcagacctcagatatttctagtcca
gagctaatgggtgttggttccttgctgaagaagtacacagccctcctgtgcacgcacatt
ggagatatactgcctgtggccgccagcattgcttctaccagctggcggcacttcgcggag
gtggcttacattgtggaaggggactttactggtgttctccttccagaactagtagtttct
atagtgcttctgctcagtaaaaatgctggtctcatgcaagaggctggagctgtacctctg
ctgggtggcctgttggaacatctggatcggttcaaccatctggcaccaggaaaggaacgg
gatgatcatgaagagttagcctggcctggcataatggagtcattttttacaggtcagaac
tgtagaaataatgaggaagtgacacttatacgcaaagctgatttggagaaccataataaa
gatggaggcttctggactgtgattgacgggaaggtgtatgatataaaggacttccagaca
cagtcgttaacaggaaatagtattcttgctcagtttgcaggggaagacccagtggtagct
ttggaagctgctttgcagtttgaagacacccgggaatccatgcacgcgttttgtgttggc
cagtatttggagcctgaccaagaaatcgtcaccataccagatctggggagtctctcttca
cctctgatagacacagagaggaatctgggcctgcttctcggattacacgcttcgtatttg
gcaatgagcacaccgctgtctcctgtcgagattgaatgtgccaaatggcttcagtcatcc
atcttctctggaggcctgcagaccagccagatccactacagctacaacgaggagaaagac
gaggaccactgcagctccccagggggcacacctgccagcaaatctcgactctgctcccac
agacgggccctgggggaccattcccaggcatttctgcaagccattgcagacaacaacatt
caggatcacaacgtgaaggactttttgtgtcaaatagaaaggtactgtaggcagtgccat
ttgaccacaccgatcatgtttccccccgagcatcccgtggaagaggtcggtcgcttgttg
ttatgttgcctcttaaaacatgaagatttaggtcatgtggcattatctttagttcatgca
ggtgcacttggtattgagcaagtaaagcacagaacgttgcctaagtcagtggtggatgtt
tgtagagttgtctaccaagcaaaatgttcgctcattaagactcatcaagaacagggccgt
tcttacaaggaggtctgcgctcctgtcatcgaacgtttgagattcctctttaatgaattg
agacctgctgtttgtaatgacctctctataatgtctaagtttaaattgttaagttctttg
ccccgttggaggaggatagctcaaaagataattcgagaacgaaggaaaaagagagttcct
aagaagccagaatctacggatgatgaagaaaaaattggaaacgaagagagtgatttagaa
gaagcttgcattttgcctcatagtccaataaatgtggacaagagacccattgcaattaaa
tcacccaaggacaaatggcagccgctgttgagtactgttacaggtgttcacaaatacaag
tggttgaagcagaatgtgcagggtctttatccgcagtctccactcctcagtacaattgct
gaatttgcccttaaagaagagccagtggatgtggaaaaaatgagaaagtgcctactaaaa
cagttggagagagcagaggttcgcctggaagggatagatacaattttaaaactggcgagc
aagaatttcttacttccatctgtgcagtatgcgatgttttgtggatggcaaagacttatt
cctgagggaatcgatataggggaacctcttactgattgtttaaaggatgttgatttgatc
ccgccttttaatcggatgctgctggaagtcacctttggcaagctgtacgcttgggctgta
cagaacattcgaaatgttttgatggatgccagtgccaaatttaaagagcttggtatccag
ccggttcccctgcaaaccatcaccaatgagaacccgtcaggaccgagcctggggaccatc
ccgcaagcccgcttcctcctggtgatgctcagcatgctcaccctgcagcacggcgcaaac
aacctcgaccttctgctcaattccggcatgctggccctcacgcagacggcactgcgcctg
attggccccagttgtgacaacgttgaggaagatatgaatgcttctgctcaaggtgcttct
gccacagttttggaagaaacaaggaaggaaacggctcctgtgcagctccctgtttcagga
ccagaactggctgccatgatgaagattggaacaagggtcatgagaggtgtggactggaaa
tggggcgatcaggatgggcctcctccaggcctaggccgcgtgattggtgagctgggagag
gacggatggataagagtccagtgggacacaggcagcaccaactcctacaggatggggaaa
gaaggaaaatacgacctcaagctggcagagctgccggctgctgcacagccctcagcagag
gattcggacacagaggatgactctgaagccgaacaaactgaaaggaacattcaccccact
gcaatgatgtttaccagcactattaacttactgcagactctttgtctgtctgctggagtt
catgctgagatcatgcagagcgaagccaccaagactttatgcggactgctgcgaatgtta
gtggaaagcggaacgacggacaagacatcttctccaaacaggctggtgtacagggagcaa
caccggagctggtgcacgctggggtttgtgcggagcatcgctctcacgccgcaggtatgc
ggcgccctcagctccccgcagtggatcacgctgctcatgaaggtcgtggaagggcacgca
cccttcactgccacctcgctgcagaggcagatcttagctgtgcatttgttgcaagcagtc
cttccatcatgggacaagaccgaaagggcgagggacatgaaatgcctcgtggagaagctg
tttgacttcttgggaagcttgctcactacctgctcctctgacgtgccattactcagagag
tccacgctgaggcggcgcagggtgcgcccgcaggcctcgctgactgccacccacagcagc
acactggcggaggaggtggtggcactgctgcgcacgctgcactccctgactcagtggaat
gggctcatcaacaagtacatcaactcccagctccgctccatcacccacagctttgtggga
aggccttccgaaggggcccagttagaggactacttccccgactccgagaaccctgaagtg
gggggcctcatggcagtcctggctgtgattggaggcatcgatggtcgcctgcgcctgggc
ggtcaagttatgcacgatgagtttggagaaggcactgtgactcgcatcaccccaaagggc
aaaatcaccgtgcagttctctgacatgcggacgtgtcgcgtttgcccattgaatcagctg
aaaccactccctgccgtggcctttaatgtgaacaacctgcccttcacagagcccatgctg
tctgtctgggctcagttggtgaacctcgctggaagcaagttagaaaagcacaaaataaag
aaatcgactaaacaggcctttgcaggacaagtggacctggacctgctgcggtgccagcag
ttgaagctatacatcctgaaagcaggtcgggcgctgctctcccaccaggataaactgcgg
cagatcctgtctcagccagctgttcaggagactggaactgttcacacagatgatggagca
gtggtatcacctgaccttggggacatgtctcctgaagggccgcagccccccatgatcctc
ttgcagcagctgctggcctcggccacccagccgtctcctgtgaaggccatatttgataaa
caggaacttgaggctgctgcactggccgtttgccagtgcttggctgtggagtccactcac
ccttcgagcccaggatttgaagactgcagctccagtgaggccaccacgcctgtcgccgtg
cagcacatccgccctgccagagtgaagaggcgcaagcagtcgcccgttcccgctctgccg
atcgtggtgcagctcatggagatgggattttccagaaggaacatcgagtttgccctgaag
tctctcactggtgcttccgggaatgcatccagcttgcctggtgtggaagccttggtcggg
tggctgctggaccactccgacatacaggtcacggagctctcagatgcagacacggtgtcc
gacgagtattctgacgaggaggtggtggaggacgtggatgatgccgcctactccatgtct
actggtgctgttgtgacggagagccagacgtacaaaaaacgagctgatttcttgagtaat
gatgattatgctgtatatgtgagagagaatattcaggtgggaatgatggttagatgctgc
cgagcgtatgaagaagtgtgcgaaggtgatgttggcaaagtcatcaagctggacagagat
ggattgcatgatctcaatgtgcagtgtgactggcagcagaaagggggcacctactgggtt
aggtacattcatgtggaacttataggctatcctccaccaagttcttcttctcacatcaag
attggtgataaagtgcgggtcaaagcctctgtcaccacaccaaaatacaaatggggatct
gtgactcatcagagtgtgggggttgtgaaagctttcagtgccaatggaaaagatatcatt
gtcgactttccccagcagtctcactggactgggttgctatcagaaatggagttggtaccc
agtattcatcctggggttacgtgtgatggatgtcagatgtttcctatcaatggatccaga
ttcaaatgcagaaactgtgatgactttgatttttgtgaaacgtgtttcaagaccaaaaaa
cacaataccaggcatacatttggcagaataaatgaaccaggtcagtctgcggtattttgt
ggccgttctggaaaacagctgaagcgttgccacagcagccagccaggcatgctgctggac
agctggtcccgcatggtgaagagcctgaatgtgtcgtcctccgtgaaccaggcatcccgt
ctcattgacggcagcgagccctgctggcagtcatcggggtcgcaaggaaagcactggatt
cgtttggagattttcccagatgttcttgttcatagattaaaaatgatcgtagatcctgct
gacagtagctacatgccgtccctggttgtagtgtcaggtggaaattccctgaataacctt
attgaactaaagacaatcaatattaacccttctgacaccacagtgccccttctgaatgac
tgcacagagtatcacaggtatattgaaattgctataaagcagtgcaggagctcaggaatc
gattgtaaaatccatggtctcatcctgctgggacggatccgtgcagaagaggaagatttg
gctgcagttcctttcttagcttcggataatgaagaggaggaggatgagaaaggcaacagc
ggaagcctcattagaaagaaggctgctgggctggaatcagcagctacgataagaaccaag
gtgtttgtgtggggcctgaatgacaaggaccagctgggcgggctgaaaggctccaagata
aaggttccttcgttctctgagacactgtcagctttgaatgtggtacaggtggctggtgga
tctaaaagtttgtttgcagtgactgtggaagggaaggtgtatgcctgtggagaagccacg
aatggccggctggggctgggcatttccagcgggacggtgcccatcccacggcagatcaca
gctctcagcagctacgtggtcaagaaggtggctgttcactcaggtggccggcacgcgacg
gctttaactgtcgatggaaaagtgttttcgtggggcgaaggtgacgatggaaaacttgga
cacttcagcagaatgaactgtgacaaaccaaggctgatcgaggccctgaaaaccaagcgt
atccgggatatcgcctgtgggagctcgcacagcgcagccctcacatccagcggagaactg
tacacctggggcctcggcgagtacggccggctgggacatggggataatacgacacagcta
aagcccaaaatggtgaaagtccttctcggtcacagagtaatccaggttgcatgtgggagt
agagacgcgcagaccctggctctgaccgatgaaggtttggtattttcctggggtgatggt
gactttggaaaactgggccggggcggaagtgaaggctgtaacattccccagaacattgag
agactaaatggacagggggtgtgccagattgagtgtggagctcagttctccctggcgctc
accaagtctggagtggtgtggacatggggaaagggggattacttcagattgggccacggc
tctgacgtgcacgtgcggaaaccacaggtggtggaagggctgagagggaagaagatcgtg
catgtggctgtcggggccctgcactgcctggcggtcacggactcggggcaggtgtatgct
tggggtgacaacgaccacggccagcagggcaatggcacgaccacggttaacaggaagccc
acactcgtgcaaggcttagaaggccagaagatcacacgcgtggcttgtgggtcgtcccac
agtgtggcgtggacaactgtggatgtggccacgccctctgtccacgagcccgtcctcttc
cagactgcaagagaccctttaggtgcttcctatttaggcgtgccttcagatgctgattct
tctgctgccagtaataaaataagtggtgcaagtaattctaagccaaatcgcccttctctt
gccaagattctcttgtcattggatggaaatctggccaaacagcaggccttatcacatatt
cttacagcattgcaaatcatgtatgccagagatgctgttgtcggggccctgatgccggcc
gccatgatcgccccggtggagtgcccctcgttctcctcggcggccccttccgacgcatct
gcgatggctagtcccatgaatggagaagaatgcatgctggctgttgatatcgaagacaga
ctgagtccaaatccatggcaagaaaagagagagattgtttcctctgaggacgcagtgacc
ccctctgcagtgactccgtcggccccctcagcctccgctcggccttttatcccagtgacg
gatgacctgggagccgcaagcatcattgcagaaaccatgaccaaaaccaaagaggatgtt
gaaagccaaaataaagcagcaggtccggagcctcaggccttggatgagttcaccagtctg
ctgattgcggatgacactcgtgtggtggtagacctgctcaagctgtcagtgtgcagccgg
gccggggacaggggcagggatgtgctctccgcggtgctttccggcatggggaccgcctac
ccacaggtggcagatatgctgttggagctctgtgtcaccgagttggaggatgtggccaca
gactcgcagagcggccgcctctcttctcagcctgtggtggtggagagtagccacccttac
accgacgacacctccaccagtggcacagtgaagataccaggtgcagaaggactcagggta
gaatttgaccggcagtgctccacagagaggcgccacgaccctctcacagtcatggacggc
gtcaacaggatcgtctccgtgcggtcaggccgagagtggtccgactggtccagcgagctg
cgcatcccaggggatgagttaaagtggaagttcatcagcgatgggtctgtgaatggctgg
ggctggcgcttcaccgtctatcccatcatgccagctgctggccctaaagaactcctctct
gaccgctgcgtcctctcctgtccatccatggacttggtgacgtgtctgttagacttccga
ctcaaccttgcctctaacagaagcatcgtccctcgccttgcggcctcgctggcagcttgt
gcacagctgagtgccctagctgccagtcacagaatgtgggcccttcagagactgaggaag
ctgcttacaactgaatttgggcagtcaattaacataaataggctgcttggagaaaatgat
ggggaaacaagagctttgagttttacaggtagtgctcttgctgctttggtgaaaggtctt
ccagaagctttgcaaaggcagtttgaatatgaagatcctattgtgaggggtggcaaacag
ctgctccacagcccattctttaaggtactggtagctcttgcttgtgacctggagctggac
actctgccttgctgtgccgagacgcacaagtgggcctggttccggaggtactgcatggcc
tcccgtgttgctgtggcccttgacaaaagaacaccgttgccccgtctgtttcttgatgag
gtggctaagaaaattcgtgaattaatggcagacagcgaaaacatggatgttctgcatgag
agccatgacatttttaaaagagagcaagacgaacaacttgtgcagtggatgaacaggcga
ccagatgactggactctctctgctggtggcagtggaacaatttatggatggggacataat
cacaggggccagctcgggggcattgaaggcgcaaaagtcaaagttcccactccctgtgaa
gcccttgcaactctcagacccgtgcagttaatcggaggggaacagaccctctttgctgtg
acggctgatgggaagctgtatgccactgggtatggtgcaggtggcagactaggcattgga
gggacagagtcggtgtccaccccaacattgcttgaatccattcagcatgtgtttattaag
aaagtagctgtgaactctggaggaaagcactgccttgccctgtcttcagaaggagaagtt
tactcttggggtgaggcagaagatgggaagttggggcatggcaacagaagtccgtgtgac
cgccctcgtgtcatcgagtctctgagaggaattgaagtggtcgatgttgctgctggcgga
gcccacagcgcctgtgtcacagcagccggggacctctacacatggggcaaaggccgctac
ggccggctggggcacagcgacagtgaggaccagctgaagccgaagctggtggaggcgctg
cagggccaccgtgtggttgacatcgcctgtggcagtggagatgcccagaccctctgcctc
acagatgacgacactgtctggtcctggggggacggggactacggcaagctcggccgggga
ggcagcgatggctgtaaagtgcctatgaagattgattctcttactggtcttggagtagtt
aaagtggaatgcggatcccagttttctgttgcccttaccaaatctggagctgtttatacc
tggggcaaaggcgattatcacaggttgggccatggatcagatgaccatgttcgaaggcct
cggcaggtccaagggttgcaggggaagaaagtcatcgccatcgccactggctccctgcac
tgtgtgtgctgcacagaggatggtgaggtttatacatggggcgacaatgatgagggacaa
ctgggagacggaaccaccaatgccatccagaggcctcggttggtagctgcccttcagggt
aagaaggtcaaccgtgtggcctgtggctcagcacataccctcgcctggtcgaccagcaag
cccgccagtgctggcaaactccctgcacaggtccccatggagtacaatcacctgcaggag
atccccatcattgcgctgaggaaccgtctgctgctgctgcaccacctctccgagctcttc
tgcccctgcatccccatgttcgacctggaaggctcgctcgacgaaactggactcgggcct
tctgttgggttcgacactctccgaggaattctgatatcccagggaaaggaggcggctttc
cggaaagtagtacaagcaactatggtacgcgatcgtcagcatggccccgtcgtggagctg
aaccgcatccaggtcaaacgatcaaggagcaaaggcgggctggccggccccgacggcacc
aagtctgtctttgggcagatgtgtgctaagatgagctcgtttggtcccgacagcctcctc
cttcctcaccgtgtctggaaagtcaagtttgtgggtgaatctgtggatgactgtgggggc
ggctacagcgagtccatagctgagatctgtgaggagctgcagaacggactcacgcccctg
ctgatcgtgacacccaacgggagggatgagtctggggccaaccgagactgctacctgctc
agcccggccgccagagcacccgtgcacagcagcatgttccgcttcctgggtgtgttgctg
ggcattgccatccgaaccgggagtcccctgagcctcaaccttgccgagcctgtctggaag
cagctggctgggatgagcctcaccatcgcggacctcagtgaggttgataaggattttatt
cctggactcatgtacatccgagacaatgaagccacctcagaggagtttgaagccatgagc
ctgcccttcacagtgccaagtgccagtggccaggacattcagttgagctccaagcacaca
cacatcaccctggacaaccgcgcggagtacgtgcggctggcgataaactatagactccat
gaatttgatgagcaggtggctgctgttcgggaaggaatggcccgcgttgtgcctgttccc
ctcctctctctgttcaccggctacgaactggagacgatggtgtgtggcagccctgacatc
ccgctgcaccttctcaagtcggtggccacctataaaggcatcgagccttccgcatcgctg
atccagtggttctgggaggtgatggagtccttctccaacacagagcgctctcttttcctt
cgcttcgtctggggccggacgaggctgcccaggaccatcgccgacttccggggccgagac
ttcgtcatccaggtgttggataaatacaaccctccagaccacttcctccctgagtcctac
acctgtttcttcttgctgaagctgcccaggtattcctgcaagcaggtgctggaggagaag
ctcaagtacgccatccacttctgcaagtccatagacacagatgactacgctcgcatcgca
cttacaggagagccagccgccgacgacagcagcgacgattcagataacgaggatgtcgac
tcctttgcttcggactctacacaagattatttaacaggacactaa

KEGG   Homo sapiens (human): 7336
Entry
7336              CDS       T01001                                 
Symbol
UBE2V2, DDVIT1, DDVit-1, EDAF-1, EDPF-1, EDPF1, MMS2, UEV-2, UEV2
Name
(RefSeq) ubiquitin conjugating enzyme E2 V2
  KO
K10704  ubiquitin-conjugating enzyme E2 variant
Organism
hsa  Homo sapiens (human)
Pathway
hsa05131  Shigellosis
Network
nt06506  Double-strand break repair
  Element
N01439  Double-strand break signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05131 Shigellosis
    7336 (UBE2V2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hsa03400]
    7336 (UBE2V2)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    7336 (UBE2V2)
SSDB
Motif
Pfam: UQ_con RWD
Other DBs
NCBI-GeneID: 7336
NCBI-ProteinID: NP_003341
OMIM: 603001
HGNC: 12495
Ensembl: ENSG00000169139
UniProt: Q15819 A0M8W4
Structure
LinkDB
Position
8:47997437..48064708
AA seq 145 aa
MAVSTGVKVPRNFRLLEELEEGQKGVGDGTVSWGLEDDEDMTLTRWTGMIIGPPRTNYEN
RIYSLKVECGPKYPEAPPSVRFVTKINMNGINNSSGMVDARSIPVLAKWQNSYSIKVVLQ
ELRRLMMSKENMKLPQPPEGQTYNN
NT seq 438 nt   +upstreamnt  +downstreamnt
atggcggtctccacaggagttaaagttcctcgtaattttcgcttgttggaagaacttgaa
gaaggacaaaaaggagtaggcgacggtacagttagctggggccttgaagatgatgaagat
atgacacttacaaggtggacaggcatgattattgggccaccaaggacaaattatgaaaac
agaatatatagcctgaaagtagaatgtggacctaaatacccagaagctcctccgtcagtt
agatttgtaacaaaaattaatatgaacggaataaataattccagtgggatggtggatgcc
cggagcataccagtgttagcaaaatggcaaaattcatatagcattaaagttgtacttcaa
gagctaagacgtctaatgatgtccaaagaaaatatgaagcttccacagccaccagaagga
caaacatacaacaattaa

KEGG   Homo sapiens (human): 7334
Entry
7334              CDS       T01001                                 
Symbol
UBE2N, HEL-S-71, UBC13, UBCHBEN, UbcH-ben, UbcH13
Name
(RefSeq) ubiquitin conjugating enzyme E2 N
  KO
K10580  ubiquitin-conjugating enzyme E2 N [EC:2.3.2.23]
Organism
hsa  Homo sapiens (human)
Pathway
hsa04120  Ubiquitin mediated proteolysis
hsa05131  Shigellosis
Network
nt06182  Shigella
nt06506  Double-strand break repair
nt06516  TNF signaling
  Element
N00944  Shigella OspI to TNF-NFKB signaling pathway
N01439  Double-strand break signaling
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    7334 (UBE2N)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05131 Shigellosis
    7334 (UBE2N)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    7334 (UBE2N)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    7334 (UBE2N)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.23  E2 ubiquitin-conjugating enzyme
     7334 (UBE2N)
Ubiquitin system [BR:hsa04121]
 Ubiquitin-conjugating enzymes (E2)
  Ubiquitin-conjugating enzymes
   7334 (UBE2N)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  TLS (translesion DNA synthesis) factors
   Rad6 epistasis group
    7334 (UBE2N)
SSDB
Motif
Pfam: UQ_con UEV RWD
Other DBs
NCBI-GeneID: 7334
NCBI-ProteinID: NP_003339
OMIM: 603679
HGNC: 12492
Ensembl: ENSG00000177889
UniProt: P61088 V9HW41
Structure
LinkDB
Position
12:complement(93405684..93441947)
AA seq 152 aa
MAGLPRRIIKETQRLLAEPVPGIKAEPDESNARYFHVVIAGPQDSPFEGGTFKLELFLPE
EYPMAAPKVRFMTKIYHPNVDKLGRICLDILKDKWSPALQIRTVLLSIQALLSAPNPDDP
LANDVAEQWKTNEAQAIETARAWTRLYAMNNI
NT seq 459 nt   +upstreamnt  +downstreamnt
atggccgggctgccccgcaggatcatcaaggaaacccagcgtttgctggcagaaccagtt
cctggcatcaaagccgaaccagatgagagcaacgcccgttattttcatgtggtcattgct
ggccctcaggattccccctttgagggagggacttttaaacttgaactattccttccagaa
gaatacccaatggcagcccctaaagtacgtttcatgaccaaaatttatcatcctaatgta
gacaagttgggaagaatatgtttagatattttgaaagataagtggtccccagcactgcag
atccgcacagttctgctatcgatccaggccttgttaagtgctcccaatccagatgatcca
ttagcaaatgatgtagcggagcagtggaagaccaacgaagcccaagccatagaaacagct
agagcatggactaggctatatgccatgaataatatttaa

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