Homo sapiens (human): 9978
Help
Entry
9978 CDS
T01001
Symbol
RBX1, BA554C12.1, RNF75, ROC1
Name
(RefSeq) ring-box 1
KO
K03868
E3 ubiquitin-protein ligase RBX1 [EC:
2.3.2.32
]
Organism
hsa
Homo sapiens (human)
Pathway
hsa03420
Nucleotide excision repair
hsa04066
HIF-1 signaling pathway
hsa04110
Cell cycle
hsa04114
Oocyte meiosis
hsa04120
Ubiquitin mediated proteolysis
hsa04141
Protein processing in endoplasmic reticulum
hsa04310
Wnt signaling pathway
hsa04350
TGF-beta signaling pathway
hsa04710
Circadian rhythm
hsa05131
Shigellosis
hsa05170
Human immunodeficiency virus 1 infection
hsa05200
Pathways in cancer
hsa05211
Renal cell carcinoma
Network
nt06165
Epstein-Barr virus (EBV)
nt06166
Human papillomavirus (HPV)
nt06182
Shigella
nt06225
HIF-1 signaling (cancer)
nt06230
Cell cycle (cancer)
nt06261
Gastric cancer
nt06264
Renal cell carcinoma
nt06267
Small cell lung cancer
nt06272
Prostate cancer
nt06502
Nucleotide excision repair
nt06509
DNA replication
nt06516
TNF signaling
Element
N00080
Loss of VHL to HIF-1 signaling pathway
N00081
Mutation-inactivated VHL to HIF-1 signaling pathway
N00091
p27-Cell cycle G1/S
N00092
Amplified MYC to p27-cell cycle G1/S
N00942
Shigella OspG to TNF-NFKB signaling pathway
N01425
Global genome NER
N01430
Transcription-coupled NER
N01473
DNA replication termination
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
9978 (RBX1)
04120 Ubiquitin mediated proteolysis
9978 (RBX1)
09124 Replication and repair
03420 Nucleotide excision repair
9978 (RBX1)
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
9978 (RBX1)
04350 TGF-beta signaling pathway
9978 (RBX1)
04066 HIF-1 signaling pathway
9978 (RBX1)
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
9978 (RBX1)
04114 Oocyte meiosis
9978 (RBX1)
09150 Organismal Systems
09159 Environmental adaptation
04710 Circadian rhythm
9978 (RBX1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
9978 (RBX1)
09162 Cancer: specific types
05211 Renal cell carcinoma
9978 (RBX1)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
9978 (RBX1)
09171 Infectious disease: bacterial
05131 Shigellosis
9978 (RBX1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
9978 (RBX1)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
9978 (RBX1)
Enzymes [BR:
hsa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.32 cullin-RING-type E3 NEDD8 transferase
9978 (RBX1)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
9978 (RBX1)
Multi subunit Ring-finger type E3
SCF complex
Ring finger protein
9978 (RBX1)
Cul2 complex
9978 (RBX1)
Cul3 complex
9978 (RBX1)
Cul4 complex
9978 (RBX1)
Cul7 complex
9978 (RBX1)
Cul8 complex
9978 (RBX1)
Cul9 complex
9978 (RBX1)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Cul4-DDB2 complex
9978 (RBX1)
TCR (transcription coupled repair) factors
Cul4-CSA complex
9978 (RBX1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-rbx1
zf-ANAPC11
zf-RING_2
zf-C3HC4
zf-C3HC4_2
zf-RING_11
zf-RING_16
Motif
Other DBs
NCBI-GeneID:
9978
NCBI-ProteinID:
NP_055063
OMIM:
603814
HGNC:
9928
Ensembl:
ENSG00000100387
UniProt:
P62877
Structure
PDB
LinkDB
All DBs
Position
22:40951378..40973309
Genome browser
AA seq
108 aa
AA seq
DB search
MAAAMDVDTPSGTNSGAGKKRFEVKKWNAVALWAWDIVVDNCAICRNHIMDLCIECQANQ
ASATSEECTVAWGVCNHAFHFHCISRWLKTRQVCPLDNREWEFQKYGH
NT seq
327 nt
NT seq
+upstream
nt +downstream
nt
atggcggcagcgatggatgtggataccccgagcggcaccaacagcggcgcgggcaagaag
cgctttgaagtgaaaaagtggaatgcagtagccctctgggcctgggatattgtggttgat
aactgtgccatctgcaggaaccacattatggatctttgcatagaatgtcaagctaaccag
gcgtccgctacttcagaagagtgtactgtcgcatggggagtctgtaaccatgcttttcac
ttccactgcatctctcgctggctcaaaacacgacaggtgtgtccattggacaacagagag
tgggaattccaaaagtatgggcactag
Homo sapiens (human): 6921
Help
Entry
6921 CDS
T01001
Symbol
ELOC, SIII, TCEB1
Name
(RefSeq) elongin C
KO
K03872
elongin-C
Organism
hsa
Homo sapiens (human)
Pathway
hsa04066
HIF-1 signaling pathway
hsa04120
Ubiquitin mediated proteolysis
hsa05170
Human immunodeficiency virus 1 infection
hsa05200
Pathways in cancer
hsa05211
Renal cell carcinoma
Network
nt06225
HIF-1 signaling (cancer)
nt06264
Renal cell carcinoma
nt06509
DNA replication
nt06523
Epigenetic regulation by Polycomb complexes
Element
N00080
Loss of VHL to HIF-1 signaling pathway
N00081
Mutation-inactivated VHL to HIF-1 signaling pathway
N01473
DNA replication termination
N01577
Gene silencing by methylation of H3K27 and ubiquitination of H2AK119
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
6921 (ELOC)
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
6921 (ELOC)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
6921 (ELOC)
09162 Cancer: specific types
05211 Renal cell carcinoma
6921 (ELOC)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
6921 (ELOC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
6921 (ELOC)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
6921 (ELOC)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul2 complex
Adoptor protein
6921 (ELOC)
Cul5 complex
6921 (ELOC)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
6921 (ELOC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Skp1_POZ
Motif
Other DBs
NCBI-GeneID:
6921
NCBI-ProteinID:
NP_001191786
OMIM:
600788
HGNC:
11617
Ensembl:
ENSG00000154582
UniProt:
Q15369
Structure
PDB
LinkDB
All DBs
Position
8:complement(73945119..73972287)
Genome browser
AA seq
112 aa
AA seq
DB search
MDGEEKTYGGCEGPDAMYVKLISSDGHEFIVKREHALTSGTIKAMLSGPGQFAENETNEV
NFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEFPIAPEIALELLMAANFLDC
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggatggagaggagaaaacctatggtggctgtgaaggacctgatgccatgtatgtcaaa
ttgatatcatctgatggccatgaatttattgtaaaaagagaacatgcattaacatcaggc
acgataaaagccatgttgagtggcccaggtcagtttgctgagaacgaaaccaatgaggtc
aattttagagagataccttcacatgtgctatcgaaagtatgcatgtattttacgtacaag
gttcgctacactaacagctccaccgagattcctgaattcccaattgcacctgaaattgca
ctggaactgctgatggctgcgaacttcttagattgttaa
Homo sapiens (human): 6923
Help
Entry
6923 CDS
T01001
Symbol
ELOB, SIII, TCEB2
Name
(RefSeq) elongin B
KO
K03873
elongin-B
Organism
hsa
Homo sapiens (human)
Pathway
hsa04066
HIF-1 signaling pathway
hsa04120
Ubiquitin mediated proteolysis
hsa05170
Human immunodeficiency virus 1 infection
hsa05200
Pathways in cancer
hsa05211
Renal cell carcinoma
Network
nt06225
HIF-1 signaling (cancer)
nt06264
Renal cell carcinoma
nt06509
DNA replication
nt06523
Epigenetic regulation by Polycomb complexes
Element
N00080
Loss of VHL to HIF-1 signaling pathway
N00081
Mutation-inactivated VHL to HIF-1 signaling pathway
N01473
DNA replication termination
N01577
Gene silencing by methylation of H3K27 and ubiquitination of H2AK119
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
6923 (ELOB)
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
6923 (ELOB)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
6923 (ELOB)
09162 Cancer: specific types
05211 Renal cell carcinoma
6923 (ELOB)
09172 Infectious disease: viral
05170 Human immunodeficiency virus 1 infection
6923 (ELOB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
6923 (ELOB)
03400 DNA repair and recombination proteins [BR:
hsa03400
]
6923 (ELOB)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul2 complex
Adoptor protein
6923 (ELOB)
Cul5 complex
6923 (ELOB)
DNA repair and recombination proteins [BR:
hsa03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
Other NER factors
6923 (ELOB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ubiquitin
Rad60-SLD
Motif
Other DBs
NCBI-GeneID:
6923
NCBI-ProteinID:
NP_009039
OMIM:
600787
HGNC:
11619
Ensembl:
ENSG00000103363
UniProt:
Q15370
Structure
PDB
LinkDB
All DBs
Position
16:complement(2771414..2777280)
Genome browser
AA seq
118 aa
AA seq
DB search
MDVFLMIRRHKTTIFTDAKESSTVFELKRIVEGILKRPPDEQRLYKDDQLLDDGKTLGEC
GFTSQTARPQAPATVGLAFRADDTFEALCIEPFSSPPELPDVMKPQDSGSSANEQAVQ
NT seq
357 nt
NT seq
+upstream
nt +downstream
nt
atggacgtgttcctcatgatccggcgccacaagaccaccatcttcacggacgccaaggag
tccagcacggtgttcgaactgaagcgcatcgtcgagggcatcctcaagcggcctcctgac
gagcagcggctgtacaaggatgaccaactcttggatgatggcaagacactgggcgagtgt
ggcttcaccagtcaaacagcacggccacaggccccagccacagtggggctggccttccgg
gcagatgacacctttgaggccctgtgcatcgagccgttttccagcccgccagagctgccc
gatgtgatgaagccccaggactcgggaagcagtgccaatgaacaagccgtgcagtga
Homo sapiens (human): 8453
Help
Entry
8453 CDS
T01001
Symbol
CUL2
Name
(RefSeq) cullin 2
KO
K03870
cullin 2
Organism
hsa
Homo sapiens (human)
Pathway
hsa04066
HIF-1 signaling pathway
hsa04120
Ubiquitin mediated proteolysis
hsa05200
Pathways in cancer
hsa05211
Renal cell carcinoma
Network
nt06225
HIF-1 signaling (cancer)
nt06264
Renal cell carcinoma
nt06509
DNA replication
Element
N00080
Loss of VHL to HIF-1 signaling pathway
N00081
Mutation-inactivated VHL to HIF-1 signaling pathway
N01473
DNA replication termination
Brite
KEGG Orthology (KO) [BR:
hsa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8453 (CUL2)
09130 Environmental Information Processing
09132 Signal transduction
04066 HIF-1 signaling pathway
8453 (CUL2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
8453 (CUL2)
09162 Cancer: specific types
05211 Renal cell carcinoma
8453 (CUL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
hsa04121
]
8453 (CUL2)
Ubiquitin system [BR:
hsa04121
]
Ubiquitin ligases (E3)
Multi subunit Ring-finger type E3
Cul2 complex
Cullin
8453 (CUL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cullin
Cullin_Nedd8
Rio2_N
TFIIE_alpha
Motif
Other DBs
NCBI-GeneID:
8453
NCBI-ProteinID:
NP_001185706
OMIM:
603135
HGNC:
2552
Ensembl:
ENSG00000108094
UniProt:
Q13617
A0A140VKB1
Structure
PDB
LinkDB
All DBs
Position
10:complement(35008551..35127006)
Genome browser
AA seq
745 aa
AA seq
DB search
MSLKPRVVDFDETWNKLLTTIKAVVMLEYVERATWNDRFSDIYALCVAYPEPLGERLYTE
TKIFLENHVRHLHKRVLESEEQVLVMYHRYWEEYSKGADYMDCLYRYLNTQFIKKNKLTE
ADLQYGYGGVDMNEPLMEIGELALDMWRKLMVEPLQAILIRMLLREIKNDRGGEDPNQKV
IHGVINSFVHVEQYKKKFPLKFYQEIFESPFLTETGEYYKQEASNLLQESNCSQYMEKVL
GRLKDEEIRCRKYLHPSSYTKVIHECQQRMVADHLQFLHAECHNIIRQEKKNDMANMYVL
LRAVSTGLPHMIQELQNHIHDEGLRATSNLTQENMPTLFVESVLEVHGKFVQLINTVLNG
DQHFMSALDKALTSVVNYREPKSVCKAPELLAKYCDNLLKKSAKGMTENEVEDRLTSFIT
VFKYIDDKDVFQKFYARMLAKRLIHGLSMSMDSEEAMINKLKQACGYEFTSKLHRMYTDM
SVSADLNNKFNNFIKNQDTVIDLGISFQIYVLQAGAWPLTQAPSSTFAIPQELEKSVQMF
ELFYSQHFSGRKLTWLHYLCTGEVKMNYLGKPYVAMVTTYQMAVLLAFNNSETVSYKELQ
DSTQMNEKELTKTIKSLLDVKMINHDSEKEDIDAESSFSLNMNFSSKRTKFKITTSMQKD
TPQEMEQTRSAVDEDRKMYLQAAIVRIMKARKVLRHNALIQEVISQSRARFNPSISMIKK
CIEVLIDKQYIERSQASADEYSYVA
NT seq
2238 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaaaccaagagtagtagattttgatgaaacatggaacaaacttttgacgaca
ataaaagccgtggtcatgttggaatacgtcgaaagagcaacatggaatgaccgtttctca
gatatctatgctttatgtgtggcctatcctgaaccccttggagaaagactttatacagaa
actaagatttttttggaaaatcatgttcggcatttgcataagagagttttggagtcagaa
gaacaagtacttgttatgtatcataggtactgggaagaatacagcaagggtgcagactat
atggactgcttatataggtatctcaacacccagtttattaaaaagaataaattaacagaa
gcggaccttcagtatggctatggtggtgtagatatgaatgaaccacttatggaaatagga
gagctagcattggatatgtggaggaaattgatggttgaaccacttcaggccatccttatc
cgaatgctgctccgagaaatcaaaaatgatcgtggtggagaagacccaaaccagaaagta
atccatggggttattaactcctttgttcatgttgaacagtataagaaaaaattcccctta
aagttttatcaggaaatttttgagtctccctttctgactgaaacaggagagtattacaaa
caagaagcttcaaatttattacaagaatcaaactgctcacagtatatggaaaaggttcta
ggtagattaaaagatgaagaaattcgatgtcgaaaatacctacatccaagttcatatact
aaggtgattcatgaatgtcaacaacgaatggtagcagaccacttacagtttttacatgca
gaatgtcataatataattcgacaagagaaaaaaaatgacatggcaaatatgtacgtctta
ctccgtgctgtgtccactggtttacctcatatgattcaggagctgcaaaaccacatccat
gatgagggccttcgagcaaccagcaaccttactcaggaaaacatgccaacactatttgtg
gagtcagttttggaagtgcatggtaaatttgttcagcttatcaacactgttttgaatggt
gatcagcattttatgagtgcgttggataaggcccttacgtcagttgtaaattacagagaa
cctaagtctgtttgcaaagcacctgaactgcttgctaagtactgtgacaacttactgaag
aagtcagcgaaagggatgacagagaatgaagtggaagacaggctcacgagcttcatcaca
gtgttcaaatacattgatgacaaggacgtctttcaaaagttctacgcaagaatgctggca
aaacgtttaattcatgggttatccatgtctatggactctgaagaagccatgatcaacaaa
ttaaagcaagcctgtggttatgagtttaccagcaagctacatcggatgtatacagatatg
agtgtcagcgctgatctcaacaataagttcaacaattttatcaaaaaccaagacacagta
atagatttgggaattagttttcaaatatatgttctacaggctggtgcgtggcctcttact
caggctccttcatctacgtttgcaattccccaggaattagaaaaaagtgtacagatgttt
gaattattttatagccaacatttcagtggaaggaaacttacatggttacattatctgtgt
acaggtgaagttaaaatgaactatttgggcaaaccatatgtagccatggttacaacatac
caaatggcagttcttcttgcctttaacaacagtgaaactgtcagttataaagagcttcag
gacagcactcagatgaatgaaaaggaactgacaaaaacaatcaaatcattacttgatgtg
aaaatgattaaccatgattcagaaaaggaagatattgatgcagaatcttcgttttcatta
aatatgaactttagcagtaaaagaacaaaatttaaaattactacatcaatgcagaaagac
acaccacaagaaatggagcagactagaagtgcagttgatgaggaccggaaaatgtatctc
caagctgctatagttcgtatcatgaaagcacgaaaagtgcttcggcacaatgcccttatt
caagaggtgattagccagtcaagagctaggtttaatcccagtatcagcatgattaagaag
tgtattgaagttctgatagacaaacaatacatagaacgcagccaggcgtcggcagatgaa
tacagctacgtcgcgtga
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