Acetivibrio saccincola: HVS_09005
Help
Entry
HVS_09005 CDS
T05223
Symbol
rimO
Name
(GenBank) Ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hsc
Acetivibrio saccincola
Brite
KEGG Orthology (KO) [BR:
hsc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hsc03009
]
HVS_09005 (rimO)
Enzymes [BR:
hsc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HVS_09005 (rimO)
Ribosome biogenesis [BR:
hsc03009
]
Prokaryotic type
ribosomal protein modification factors
HVS_09005 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
AUG57707
UniProt:
A0A2K9E1R4
LinkDB
All DBs
Position
complement(1970060..1971403)
Genome browser
AA seq
447 aa
AA seq
DB search
MKKKVGLVSLGCPKNLVDSEIMLGKLKENFEITSDERAADIIIVNTCGFIDSAKEESINT
ILEMAKYKDGNCEVLIVTGCLAQRYKDEVIKEMPEVDAVIGTGEYGEIDKVIQNIYNGKI
KCYTNLNDRDNIKYLNEERVLSTKNGYAYLKIAEGCDNFCTYCIIPSLRGPYRSRKIEDI
KKEAGILAEKGAKEIILIAQDVTSYGKDIYGEKRLVRLIREISEIDKIEWIRLLYCYPEE
IDDALIEEISTNNKIVKYLDIPIQHASDDILKKMGRRGTSRNFKDVLEKLKTKIPEIAIR
TSLIAGFPGESEKDFEILCDFVKETEFDRLGVFTYSREEGTAAYNLKPQIKKSVKELRRA
HIMQLQREIVLKKNKKRLNKVYKTLVEGVAEDGIFYYGRTYKEAPEIDGYIFFTSMQPIE
IGKFVNVRILNIDEYDLIGDVVHEPSQ
NT seq
1344 nt
NT seq
+upstream
nt +downstream
nt
ttgaagaaaaaggtaggacttgtttcactgggatgcccgaaaaatttagttgacagcgaa
ataatgctggggaaactaaaagaaaattttgaaataacttcagatgaaagggcagctgat
attataatcgttaacacttgtggatttattgattctgcaaaggaagagtcaattaacact
atattggagatggcaaaatacaaagatggtaattgtgaagtgctaattgttacaggatgt
ctggctcaaaggtataaggatgaagtaattaaggaaatgcctgaagtagatgctgtaatt
ggtacaggggaatatggtgagattgataaagtaatacaaaatatttacaatggaaaaata
aaatgttatacaaatttaaatgacagggataatattaaatatttaaacgaagaaagagtg
ctttcaactaaaaatggatatgcttatttaaaaatagctgaaggctgtgacaacttttgt
acatattgtattattccttcccttaggggaccttacaggagcagaaaaattgaggatatc
aaaaaggaagcagggatccttgcagaaaaaggtgcaaaagaaattatcctcatagcccag
gatgttaccagctatggaaaagatatatatggagagaaaagactagttagattaataagg
gaaataagtgaaattgacaaaattgagtggataagacttctttactgttatcctgaagaa
attgatgatgcattgattgaggaaatttcaaccaataacaaaatagtaaaatatttagat
attcccattcaacatgcaagtgatgatatactcaaaaaaatgggaagaagaggaacatca
agaaattttaaagatgttcttgaaaaacttaaaaccaaaatacctgaaattgccattagg
acatcattaatagccgggtttcccggagagagtgaaaaggactttgaaattttatgcgac
tttgttaaagaaacagagtttgacagattaggggtatttacatattcaagagaagaaggt
acagctgcatacaacctaaagccccagattaaaaaaagcgtcaaagaattaagacgggct
catataatgcagctgcagagggaaattgtgttaaagaaaaataaaaagaggttaaacaaa
gtttataaaacgctggtggagggtgttgctgaggacggtatcttttattatggaagaacg
tataaagaagcacctgaaatagacggatatatattttttacaagtatgcaacctatagaa
attggaaagtttgtaaatgtgagaatattaaatattgatgaatatgatttaataggagat
gttgtgcatgaaccttcccaataa
DBGET
integrated database retrieval system
