Herbinix luporum: SD1D_1623
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Entry
SD1D_1623 CDS
T04072
Symbol
thiI
Name
(GenBank) putative tRNA sulfurtransferase
KO
K03151
tRNA uracil 4-sulfurtransferase [EC:
2.8.1.4
]
Organism
hsd
Herbinix luporum
Pathway
hsd00730
Thiamine metabolism
hsd01100
Metabolic pathways
hsd01240
Biosynthesis of cofactors
hsd04122
Sulfur relay system
Brite
KEGG Orthology (KO) [BR:
hsd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
SD1D_1623 (thiI)
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04122 Sulfur relay system
SD1D_1623 (thiI)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsd03016
]
SD1D_1623 (thiI)
Enzymes [BR:
hsd01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.4 tRNA uracil 4-sulfurtransferase
SD1D_1623 (thiI)
Transfer RNA biogenesis [BR:
hsd03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
SD1D_1623 (thiI)
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Gene cluster
GFIT
Motif
Pfam:
ThiI
THUMP
QueC
ATP_bind_3
tRNA_Me_trans
NAD_synthase
Motif
Other DBs
NCBI-ProteinID:
CUH93169
UniProt:
A0A0K8J6Y5
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Position
I:complement(1727292..1728467)
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AA seq
391 aa
AA seq
DB search
MYRAFLIKYAEIGLKGKNRYLFENALRDRIAEVLKPLGEYLVTKEQGRIFLECPENYDYE
ETVAALQRVFGISSICPVVVIDGSDWEKLTQGVGDYVEAMYPNKDFTFKVMAKRADKNYP
MTSPDICSKMGAYLLNRFTNLKVDVHQPKVRITIEVRSKSYVYSMDIPGPGGMPVGSNGK
AMLLLSGGIDSPVAGYMISKRGVSMTAVYFHAPPYTSERAKQKVVDLAKKIARYSGKLKL
FVINFTDIQLYIYDKCPHNELTIIMRRYMMRIAEHLAKQENCLGLVTGESIGQVASQTMQ
SLASTNEVCTMPVYRPLIAFDKKDIVDIAKKIDTYETSIQPFEDCCTIFVAKHPVIKPNL
KTIRNSERKLEEKIDEMVEQALKTVQVIEVE
NT seq
1176 nt
NT seq
+upstream
nt +downstream
nt
atgtatagagcatttttaataaaatatgcagaaatcggattgaagggaaaaaaccgttac
ttattcgagaatgctcttcgcgatagaatcgcagaagtcctaaagcccttaggagagtat
ctggttactaaagaacagggcaggatttttcttgagtgtccagaaaattatgattatgaa
gagacggttgctgcacttcagagggtatttggaatatcatctatctgtccggtagtggta
atagacggctctgattgggaaaaattaactcagggtgtaggagattatgtggaagctatg
tatcccaataaggattttacttttaaagtaatggctaaacgtgccgacaagaattatccc
atgacttctcctgatatctgcagcaagatgggtgcatatttgcttaatagatttacgaat
ttaaaggtagatgttcatcaaccaaaagtacgtataacaattgaagttcgcagtaaatcc
tatgtatattccatggatattcccggtcccggagggatgcccgtaggaagcaacggaaag
gcaatgcttttactatcgggaggcatagatagtcccgttgcaggttatatgatttcaaaa
cggggagtatccatgacggctgtatattttcacgctcccccttataccagtgaaagagca
aaacaaaaggtggtagacctagccaaaaagatagccagatactccggtaagctaaaactt
tttgttataaactttactgatatccagctttatatttatgataaatgtcctcataacgag
cttactattattatgcgcagatatatgatgaggattgcagagcatttggcaaagcaggag
aattgtctgggacttgtaacaggagaaagtataggtcaggtggccagtcaaaccatgcaa
agcctagcttcaaccaatgaggtatgtactatgccggtatatagacctttaattgccttt
gataagaaagacattgtagatatcgctaaaaagattgatacttacgaaacatcaatacaa
ccttttgaggattgttgtaccatatttgtagctaagcatccggttattaagcctaatcta
aaaacaatccgtaattcagaaagaaaattagaagaaaaaattgatgaaatggtagagcag
gctctaaaaactgttcaggtgattgaagtagagtag
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