Herbaspirillum seropedicae SmR1: Hsero_0012
Help
Entry
Hsero_0012 CDS
T01268
Name
(GenBank) amidase family protein
KO
K01426
amidase [EC:
3.5.1.4
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00330
Arginine and proline metabolism
hse00360
Phenylalanine metabolism
hse00380
Tryptophan metabolism
hse00627
Aminobenzoate degradation
hse00643
Styrene degradation
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
Hsero_0012
00360 Phenylalanine metabolism
Hsero_0012
00380 Tryptophan metabolism
Hsero_0012
09111 Xenobiotics biodegradation and metabolism
00627 Aminobenzoate degradation
Hsero_0012
00643 Styrene degradation
Hsero_0012
Enzymes [BR:
hse01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.4 amidase
Hsero_0012
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Amidase
Motif
Other DBs
NCBI-ProteinID:
ADJ61542
UniProt:
D8ITQ1
LinkDB
All DBs
Position
17667..19115
Genome browser
AA seq
482 aa
AA seq
DB search
MHQLVTLDALALSAAIRSKEVSCREVMQAYLEHIEKMNPHVNAIVSLRPPEELLDEAKRA
DQLLAQGRYLGWMHGMPQAPKDLASCKGLPTSKGSPLSSMAPDQSDATCVARVRDAGAIF
IGKTNVSEFGLGSNSYNPLFGVTRNAYDFSRIAGGSSGGAGAALAMRMLPVADGSDMMGS
LRNPAAFNNVYGFRPTQGRVPYGSGGELFLQQLSTEGPMGRTVADVARLFATQAGYDPQC
PLSSDTDVTGDAAQLKRDFKGARIGWLGNYDGYLPIEEEVMVLCEAALSDFADIGCTVEQ
CRPDYPMEKLWETWLVHRQWLVGGNLSVYFADPARRGLLKPEAQWEVESGQYLTAADVFR
ASMARSDWYRAIHKLFEQFDYLLLPSAQMFPFDVATKWPRNVAGREMDTYHRWMEVVIGP
TLAGLPAMSVPVGFGANGLPMGMQIIGPSRDDRGVLQLAYALEGLRPWSAQAPLAVIDAL
SR
NT seq
1449 nt
NT seq
+upstream
nt +downstream
nt
atgcaccaactggtcacgctcgatgcactggcgttgtctgctgcaattcgcagcaaggaa
gtctcttgccgtgaagtcatgcaagcgtatctggaacatatcgagaagatgaacccgcat
gtgaatgcgatcgtctcgctccgaccgccggaagaactgctcgatgaagcgaaacgcgcg
gaccagttacttgcgcagggcaggtatctcggatggatgcacggcatgccccaggcgccg
aaggacctcgcgtcgtgcaaaggacttcctaccagcaaaggctctcctctatcgtccatg
gcgcccgaccagagcgacgcaacgtgcgtggcccgtgtacgcgacgccggcgccattttc
atcggaaagactaacgtctccgaattcggacttggctcaaacagctacaacccgctgttc
ggcgtgaccaggaacgcttatgacttctctcgcatcgctggcggtagtagcggtggcgct
ggtgcggcgctggcgatgcgtatgttgccggtggccgacggcagcgacatgatggggtcc
ttgagaaacccggcggcgttcaataatgtgtatggcttcaggccaacccagggaagagtt
ccttacggttccggcggggaactctttctgcagcaattaagtacggagggcccaatgggg
cgaaccgtggctgatgtcgcccgacttttcgcgacccaggcaggatatgatccccagtgc
cctctttccagcgacacggatgtcactggcgacgcagcgcaattgaaacgggatttcaaa
ggcgcccgaattggatggctcggaaactatgatggctacctgccgatagaagaggaagtc
atggtgctgtgcgaggccgcgctgtcggactttgcggacattggctgtacggtagagcaa
tgtcgacctgactatccgatggaaaagctctgggaaacgtggctcgttcaccggcaatgg
ctagtgggcggaaatttgagcgtctactttgctgatccggcgcggcgtggcttgctcaag
ccagaggcgcaatgggaagtggagtcaggccagtacttgacggccgccgatgttttccgc
gcatccatggcacgcagcgattggtatcgcgccattcacaagctcttcgaacaatttgat
tacctgctgttgcccagcgcacagatgtttccgttcgatgtggcgacgaagtggccgcga
aacgtagctggtcgggaaatggacacctaccatcgctggatggaggtagtcattggcccg
acgctggctggattgccggcgatgagtgtaccggtagggtttggcgcgaacggtctacct
atgggaatgcaaatcatcggtccctcccgggatgacagaggtgttttgcagttggcgtat
gcattggaaggcttgcgtccgtggagcgcacaagctccactagctgtcatcgatgcactc
agtcgatag
DBGET
integrated database retrieval system