Herbaspirillum seropedicae SmR1: Hsero_1117
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Entry
Hsero_1117 CDS
T01268
Symbol
hmgA
Name
(GenBank) homogentisate 1,2-dioxygenase protein
KO
K00451
homogentisate 1,2-dioxygenase [EC:
1.13.11.5
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00350
Tyrosine metabolism
hse00643
Styrene degradation
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
Module
hse_M00044
Tyrosine degradation, tyrosine => homogentisate
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
Hsero_1117 (hmgA)
09111 Xenobiotics biodegradation and metabolism
00643 Styrene degradation
Hsero_1117 (hmgA)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.5 homogentisate 1,2-dioxygenase
Hsero_1117 (hmgA)
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Motif
Pfam:
HgmA_N
HgmA_C
Motif
Other DBs
NCBI-ProteinID:
ADJ62634
UniProt:
D8J1L3
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All DBs
Position
1271540..1272877
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AA seq
445 aa
AA seq
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MNTATDFSVSHHVHTRGYQSGFGNEFATEALPSALPAHQNSPQRVAYGLYAEQISGTAFT
APRGHNRRSWLYRIRPAAMHHPFEAMSQGLLVSRFDDVAPPPNQLRWDPLPMPTTPTDFI
DGLVTMAGNGSPQAQSGCAIHLYAANCSMTDRFFYSADGELLIVPQMGRLQLRTEMGVID
IEPQEIAVIPRGVRFQVRLPGGEARGYICENFGALLRLPDLGPLGSNGLANPRDFATPHA
WYEDREGDFQLIAKFGGQLWQARIGHSPLDVVAWHGNYAPYKYDLRHFNTIGSISYDHPD
PSIFLVLQSQSDTPGVDTIDFVIFPPRWLAAENTFRPPWFHRNVASEYMGLITGQYDAKE
GGGFVPGGGSLHNCMSGHGPDAATFEKASRIDTSTPNKVDHTMAFMFETRNILCPTRHAL
ASPALQRDYQDCWLGIQKNFNPEHP
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgaataccgctaccgatttttccgtcagccaccacgtgcatacccgtggctaccagtcc
ggcttcggcaatgagttcgccaccgaggccttgccgagcgccttgccggcgcatcagaat
tccccccagcgcgtggcctacgggctctatgccgagcagatctccggcaccgccttcacc
gctccacgcggccacaatcggcgttcctggctctatcgcatccgcccggcggccatgcat
catcccttcgaggccatgtcgcaaggcctgctggtgagccgcttcgatgatgttgccccg
cctcccaaccagttgcgctgggatccgttgcccatgccgaccacgcccaccgatttcatc
gacggcctggtgaccatggccggcaatggctcaccgcaggcgcagagcggttgcgccatc
cacctgtatgcggccaattgctccatgaccgaccgcttcttctattcggccgatggcgaa
ctgctgatcgtgccgcagatgggccgcctgcaattgcgcaccgagatgggcgtgatcgat
atcgaaccgcaggagatcgccgtcatcccgcgcggcgtgcgcttccaggtgcgcctgccc
ggtggtgaagcgcgcggctatatctgcgagaacttcggtgcgctgctgcgcctgccggac
ctgggcccgctgggttccaatggcctggccaacccgcgtgatttcgccacgccccatgcc
tggtacgaagaccgcgagggcgacttccagctcatcgccaagttcggcggccagctctgg
caagccaggatcggccattctccgctggatgtagtggcctggcatggcaactacgccccc
tacaagtacgacctgcggcacttcaacaccatcggctcgatcagctacgaccaccccgat
ccgtccatcttcctggtgctgcaatcgcagagcgatacgcccggcgtggataccatcgac
ttcgtgatcttcccgccgcgctggctggccgccgaaaacaccttccgcccgccctggttc
catcgcaacgtggccagcgaatacatgggcctgatcactggccagtacgacgccaaggaa
ggcggcggctttgtgccgggcggtggcagcctgcataattgcatgagcggccatggaccg
gacgccgccaccttcgagaaggccagccgcatcgataccagcacaccgaacaaggtcgat
cacaccatggccttcatgttcgagacccgcaacatcctttgcccgacccgccatgcgctg
gcgtcgcccgccttgcagcgcgactaccaggattgctggctgggcatccagaagaacttc
aacccggagcacccatga
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