Herbaspirillum seropedicae SmR1: Hsero_2087
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Entry
Hsero_2087 CDS
T01268
Symbol
pmrF
Name
(GenBank) polymixin resistance glycosyltransferase transmembrane protein
KO
K10012
undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase [EC:
2.4.2.53
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00520
Amino sugar and nucleotide sugar metabolism
hse01100
Metabolic pathways
hse01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
Hsero_2087 (pmrF)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
Hsero_2087 (pmrF)
Enzymes [BR:
hse01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.2 Pentosyltransferases
2.4.2.53 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase
Hsero_2087 (pmrF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glycos_transf_2
Glyco_tranf_2_3
Glyco_transf_21
Glyco_tranf_2_2
Glyco_tranf_2_4
eRF1_1
Motif
Other DBs
NCBI-ProteinID:
ADJ63587
UniProt:
D8IT28
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All DBs
Position
complement(2346928..2347884)
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AA seq
318 aa
AA seq
DB search
MKPELSVVIPVYNEESGLSKLFERLYPALDALGYSYEVIFVNDGSRDRSAGILAEQYRLR
PDVTRVVLFNGNYGQHMAIMAGFEATRGDIVVTLDADLQNPPEEIGNLVAKMREGYDYVG
SIRRKRQDSAWRTYASKAMNRLREKITRIKMTDQGNMLRAYGRNVIDLVNKCREINTFVP
ALAYTFSRNPTEIVVEHEERSAGESKYSLYSLIRLNFDLVTGFSLVPLQFFSLLGIGLSF
ASAALFILIVLRRLLIGAEVGGVFTLFAITFFLMGVILFSIGLLGEYIGRIYMQVRARPR
YVVQAILEQSSAEDNQST
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atgaaaccagaactgtccgtcgtcatcccggtttacaacgaggaatcggggctctccaaa
ctgttcgagcgcctctacccggcgctggacgccttgggctacagctatgaagtcatcttc
gtcaacgatggcagccgcgaccgctccgccggcatcctggccgagcagtatcgcctgcgt
ccggacgtgacgcgggtggtcctgttcaatggcaactacggccagcacatggccatcatg
gcaggcttcgaggcaacccggggcgacatcgtcgtcaccctcgacgccgacctgcagaac
ccgcccgaagaaatcggcaacctggtggccaagatgcgcgagggctacgactacgtcggc
tcgatccgccgcaagcgccaggattcggcctggcgcacctatgcctccaaggccatgaat
cgcctgcgcgaaaagatcacccgcatcaagatgaccgaccagggcaacatgctgcgcgcc
tatggccgcaacgtcatcgatctggtcaacaaatgccgcgaaatcaataccttcgtgcct
gcattggcctacaccttctcgcgcaacccaaccgagatcgtggtcgagcacgaggagcgc
tcggccggcgaatccaagtattcgctctatagcctcatccgcctgaatttcgacctggtg
accggtttctcgctggtgccgctgcagttcttctcgctcttgggcatcggcctgtccttc
gcctcggcggcgctgttcatcctgatcgtgctgcgccgcctgctgatcggcgccgaagtg
ggcggtgtcttcaccctcttcgccatcaccttcttcctgatgggggtgatcctgttctcc
atcggcctcttgggtgaatacatcggccgcatctacatgcaggtgcgggcacgcccgcgc
tacgtggtgcaggccatcctcgaacaatcctctgcagaagacaatcaatccacatga
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