KEGG   Herbaspirillum seropedicae SmR1: Hsero_2440
Entry
Hsero_2440        CDS       T01268                                 
Symbol
polB
Name
(GenBank) DNA polymerase II protein
  KO
K02336  DNA polymerase II [EC:2.7.7.7]
Organism
hse  Herbaspirillum seropedicae SmR1
Brite
KEGG Orthology (KO) [BR:hse00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:hse03400]
    Hsero_2440 (polB)
Enzymes [BR:hse01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Hsero_2440 (polB)
DNA repair and recombination proteins [BR:hse03400]
 Prokaryotic type
  TLS (translesion DNA synthesis) factors
   Other SOS response factors
    Hsero_2440 (polB)
SSDB
Motif
Pfam: DNA_pol_B DNApolII_N DNA_pol_B_exo1 DNA_pol_B_2 P63C
Other DBs
NCBI-ProteinID: ADJ63939
UniProt: D8IWB9
LinkDB
Position
complement(2769808..2772180)
AA seq 790 aa
MRPGERAGFILTRHWRDTPAGVEIELWLATDTGAQCLRLPPQQAVAFVPQSEQARVQDLL
RGVAGVELKPLEALKDFSQRPVMGLYARHYRQLLRLEKQLVAAGISVYEADIRPPERYLM
ERFINAPVAFGGVDDGQGVLGQARLRPLPGYRPPLRLASLDIETSWQGELYSIAIEGCGQ
RTVYTLAPASGAVQAVDFALHFCDSRRELIEALNAWMARHDPDVIIGWNLIQFDLNVLQK
QADQYQTRLLPGRAAQPLEWRKHGLRAGHLLVSAPGRLVIDGIESLRSAFWNFPSFSLEN
VAQTLLGEGKAIATPYQRMDEIDRMFAEDRAALATYNLKDCELVTRIFAVTDILSFLLER
ASVTGLPADRSGGSVAAFTHLYLPQLHRKGYVAPNLGDAEALASPGGFVMDSRSGLYDSV
IVLDYKSLYPSIIRSFLIDPAGLVDGTLNESEAQTVPGFNGARFSRRSHSLPAIIEQIWQ
AREQAKAQGNKALQQALKIIMNSFYGVLGSTGCRFFDSRLASSITRRGHEIMHRTRELIE
EQGYEVIYGDTDSTFVWLRSAHSDEEARSIGLALTSRINDWWRLHLRQQYGLESALELQY
EVHYQRFLMPTVRGSDTGSKKRYAGYVRTAEGEDKVTYKGLETVRTDWTPLAQRFQQELY
LRIFRGETYRDYVRSYVAELLAGRLDELLVYRKRLRRQLDHYEKNVPPHVRAARMADQVN
QDDGRPLQYQQGGWITYVMTTAGPEPLEKRSAAIDYGHYLERQLAPVADAILVFVGDSFA
ALTSPQQELF
NT seq 2373 nt   +upstreamnt  +downstreamnt
ctgcgccccggcgagcgcgccggcttcattctcacgcggcactggcgcgacacgccggcc
ggtgtggaaatcgagctctggctggccaccgatactggcgcgcaatgcctgcgcctgccg
ccgcagcaggcagtggccttcgtgccgcaaagcgagcaggcgcgcgtgcaagacctgttg
cggggtgtggccggggtcgagctcaagcccctggaagcgctcaaggatttcagccagcgc
ccggtgatgggactgtacgcccgtcactatcgccagttgctgcggctggaaaagcagttg
gtggccgccgggatcagcgtctacgaggccgacatccgcccgcccgagcgctacctgatg
gagcgtttcatcaatgcgccggtggccttcggcggcgtggacgatggtcagggcgtgctg
ggccaggcgcgcctgcggcccttgccgggctatcgcccaccgttgcgactggcctcgctg
gacatcgagaccagctggcagggcgagctctattcgattgccatcgagggttgcggccag
cgcactgtctataccctggcgccggccagcggggcggtgcaggcggtggatttcgcgctg
cacttctgcgattcgcggcgcgagctgatcgaagcgctcaatgcctggatggcccgccac
gaccccgacgtcatcattggctggaacctgatccagttcgatctcaacgtcttgcagaag
caggccgaccagtaccagacccgcctgctgccgggccgcgccgcgcagccgctggaatgg
cgcaagcacggcctgcgcgccggccatctgctggtcagcgcaccgggacggctggtcatc
gacggcatcgagagcctgcgttcggccttctggaacttcccttccttcagcctcgagaat
gtggcgcagacgctgctgggcgagggcaaggccatcgccacgccttaccagcgcatggac
gagatcgaccgcatgttcgccgaggaccgggcggccctggcgacctacaacctcaaggat
tgcgaactggtcacgcgtatcttcgccgtcaccgacatcctctccttcctgctggagcgc
gccagcgtgaccggtctgccggccgaccgcagcggcggctcggtggcggccttcacccat
ctgtatctgccgcaattgcaccgcaagggctacgtcgctcccaacctgggcgacgccgag
gcgctggccagtccggggggcttcgtgatggattcgcgctcgggcctgtacgattcggtc
atcgtgctggactacaagagcctgtaccccagcatcatccgcagcttcctgatcgacccg
gccgggctggttgacggcaccctcaatgaaagcgaggcgcagaccgtgcccggcttcaat
ggggcgcgcttctcgcgtcgcagccacagcctgccggccatcatcgaacagatctggcag
gcccgcgaacaggccaaggcgcagggcaacaaggccttgcaacaggcgctgaagatcatc
atgaattccttctacggcgtgctgggctcgaccggctgccgtttcttcgattcacggctg
gcttcgtcgatcacccggcgcggccacgagatcatgcatcgcacccgcgaactgatcgaa
gagcagggctatgaagtcatctatggcgataccgattccaccttcgtctggctgcgcagc
gcccacagcgacgaagaggcgcgcagcatcggcctggcgctgaccagtcgcatcaacgac
tggtggcgcctccacctgcgccagcaatatgggctggagagcgcgctggagctgcagtac
gaggtgcattaccagcgcttcctcatgcccacggtgcggggttcggacactggcagcaag
aagcgctacgccggttacgtccgcaccgccgagggcgaggataaggtgacctacaaggga
ctggagacggtgcgcaccgactggacgccgctggcccagcgcttccagcaggagctgtac
ctgcgcatcttccggggcgaaacgtatcgggattacgtgaggtcgtacgtggccgagctc
ctggccggacggctcgatgaactgctggtctaccgcaagcgcctgcgccgccagctcgac
cattacgaaaagaacgtgccgccccatgtgcgcgccgcgcgcatggccgatcaggtcaac
caggatgacggccgtccgctgcaataccagcagggcggctggatcacctatgtgatgacc
accgccggccccgaaccgctggaaaagcgcagcgccgccatcgactacggtcattacctg
gagcgccagctggcgccggtggccgacgccatcctggtgttcgtgggcgacagctttgcc
gcgctcacctcgccgcagcaggaattgttctga

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