Herbaspirillum seropedicae SmR1: Hsero_3016
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Entry
Hsero_3016 CDS
T01268
Name
(GenBank) response regulator protein
KO
K11444
two-component system, chemotaxis family, response regulator WspR [EC:
2.7.7.65
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Hsero_3016
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
hse02022
]
Hsero_3016
Enzymes [BR:
hse01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.65 diguanylate cyclase
Hsero_3016
Two-component system [BR:
hse02022
]
CheA family
WspE-WspRF (chemosensory)
Hsero_3016
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GGDEF
Response_reg
AAA_lid_3
Motif
Other DBs
NCBI-ProteinID:
ADJ64504
UniProt:
D8J0E8
LinkDB
All DBs
Position
complement(3433021..3434046)
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AA seq
341 aa
AA seq
DB search
MSSVHTDIPLVSPALPADEYKIMVLLVDDQPMVGEAIRRALANEPHIDFHFCTRAEEALT
VAERTRPTVILQDLVMPGVDGMTLVRQYRASAVLVNVPIIVLSSRDDAVVKRDAFAGGAN
DYMVKLPDVIELVARIRYHSRSYINLLQRDAAYSALRESQQQLQKSNFELQRLTNTDGLT
GIANRRYFDDYLGAEWRRARRDGLDLALLLIDVDFFKLYNDNYGHVAGDAVLRQVAEALD
SSIQRPADLSARFGGEEFAMILPRTGLDGAHAIAQKVCHLVESLQVPHEGSSVSAWLTVS
VGAATLVPQEQQELRELIEAADRRLYLAKQQGRNRVVWQDG
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atgagttcggtgcataccgacatcccgttggtcagtccagcgctgccggcggatgaatac
aagatcatggtcttgctggtcgatgaccagcccatggtgggcgaggcgatccgccgcgcc
ctggccaatgagccgcacatcgatttccatttctgcacccgtgccgaggaagcgctgacc
gtggctgaaaggacccggcccaccgtgatcctgcaggacctggtcatgccaggggtggac
gggatgaccctggtgcggcaataccgcgccagcgccgtgctggtcaatgtgcccatcatc
gtgctgtcctcgcgcgatgacgccgtggtcaagcgcgatgcgtttgccggcggcgccaat
gactacatggtcaagctgcccgacgtcatcgagctggtggcgcgcatccgttaccattcg
cgttcctacatcaacctgctgcagcgcgacgccgcctacagcgccctgcgcgaaagccag
cagcagttgcagaagagcaatttcgagctgcagcgcctgaccaataccgatggcctgacc
ggcatcgccaaccgccgctacttcgacgactacctcggtgcggaatggcggcgggcgcgg
cgcgacggcctggacctggcgctcttgctcatcgatgtggacttcttcaagctctacaac
gacaactacggccacgttgccggcgacgccgtgctgcgccaggtcgccgaggccctcgat
agcagcatccagcgtccggccgacctgtcggcgcgctttggcggtgaagagttcgccatg
atcctgccgcgcacgggtctggatggcgcccacgccatcgcgcagaaggtctgccatctg
gtcgaatcgctgcaggtgccgcacgaaggctccagcgtgagcgcctggctcaccgtgagc
gtgggcgcggctaccctggtgccgcaggagcaacaggagctgcgtgagctgatcgaggcc
gccgaccgccgtctgtacctggccaagcagcaaggacgcaatcgcgtggtctggcaggac
ggctga
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