Herbaspirillum seropedicae SmR1: Hsero_3342
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Entry
Hsero_3342 CDS
T01268
Symbol
betA
Name
(GenBank) choline dehydrogenase protein
KO
K06151
gluconate 2-dehydrogenase alpha chain [EC:
1.1.99.3
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00030
Pentose phosphate pathway
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00030 Pentose phosphate pathway
Hsero_3342 (betA)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.3 gluconate 2-dehydrogenase (acceptor)
Hsero_3342 (betA)
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Motif
Pfam:
GMC_oxred_C
GMC_oxred_N
DAO
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
ADJ64823
UniProt:
D8J240
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Position
complement(3832979..3834760)
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AA seq
593 aa
AA seq
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MAIKKDKVDVVMVGLGWTGSIMGMELTEAGLSVLALERGDMRDTNTDTPYPKAVDELKYS
VRGALFQDLSRETVTIRHTLSDVAVPYRQHGSFLLGDGVGGAGFHWNGMMYRNLPEELEM
RTHHEQKYGKKFIPEDMTIQDHGVTYKELEPFYDFSEKVMAVSGKAGNLKGQIVPGGNPL
EGERSDEFPTPPLQYQYSASLVEKAMRDVGYHPYPAPAANASQPFTNPYGVRIGPCNYCG
FCENYGCYMYSKASPQTTILPVLLKRKNFEVRTKAQVIKVNLDASGKRATGVTYIDAQGR
EVEQPADLVLLTAFQTHNVRLLLLSGIGKPYDPVTGEGVVGKNFAYQYNGGINVIMPKGT
QFNPFIGTGAGGVGMDDLNADQFDHGPLGFIGGASIRHVRYGGRPIKQAGTMPGEKVPSW
GSEWKASVQDAYQRTLTIGMSGSVMAYRDCYLSLDPTYRDANGQPLLRLTLNWKENEGKM
LTYIASQMEKVGQAMNPEKVVKAVRKTGSSWDTRVYQSTHLTGGAIMGTTPKNSVVNKYL
QSWDVPNVFVYGACAFPQNMGYNPTGLVTALAYHSAKAIREQYLKNPGPLVQA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggctatcaaaaaagacaaagtggatgtagtgatggtgggcctgggctggaccggctcc
atcatgggcatggagctcaccgaagccggcctgagcgtgctggcgctggaacgcggcgac
atgcgtgacaccaataccgacacgccctatcccaaggccgtcgatgaactgaaatactcc
gtgcgcggcgcgctgttccaggacctctcgcgcgagaccgtgaccatccgtcacaccctc
tcggatgtggccgtgccgtaccgccagcatggctccttcctgctgggcgatggcgtgggc
ggcgctggtttccactggaacggcatgatgtaccgcaacctgcccgaagagctggaaatg
cgcacccaccacgagcagaagtacggcaagaaattcatccccgaggacatgaccatccag
gaccatggcgtgacctacaaggagctggagcccttctacgacttctccgaaaaggtcatg
gccgtctccggcaaggccggcaatctcaagggccagatcgtccccggcggcaatccgctg
gaaggcgagcgcagcgacgaattcccgaccccgccgctgcaataccagtacagcgcgtcg
ctggtcgagaaggccatgcgcgatgtcggttaccacccctatccggccccggcggccaat
gcctcgcaacccttcaccaatccgtacggcgtgcgcatcggcccctgcaactactgcggc
ttctgcgaaaactacggctgctacatgtattccaaggcctcgccgcagaccaccatcctg
ccggtgctgttgaagcgcaagaacttcgaggtgcgcaccaaggcccaggtcatcaaggtc
aacctggatgcctccggcaagcgcgccaccggtgtcacctacatcgatgcccaggggcgc
gaggtcgagcaacccgccgacctggtgctgctgaccgccttccagacccacaacgtgcgc
ctgctgctgctctcgggcatcggtaagccgtatgacccggtgaccggcgaaggtgtggtc
ggcaagaactttgcctaccagtacaacggcggcatcaacgtgatcatgcccaagggcacg
caattcaaccccttcatcggcaccggcgccggtggcgtgggcatggatgacctcaacgcc
gaccagttcgaccacggtccgctgggcttcatcggcggcgcctcgatccgtcacgtgcgc
tatggcggccgtcccatcaagcaggccggcaccatgccgggcgagaaggtgcccagctgg
ggttccgaatggaaggccagtgtgcaggatgcctaccagcgcaccctgaccatcggcatg
tccggttcggtgatggcctatcgcgattgctacctgtcgctggacccgacctacagggat
gccaacggccagccgctgttgcgcctgaccctgaactggaaggagaacgaaggcaagatg
ctgacctacatcgccagccagatggaaaaggtcggccaggccatgaatccggaaaaggtc
gtcaaggcggtgcgcaagaccggttcgtcctgggatacccgggtctatcaatcgacccac
ctgaccggtggcgcgatcatgggcaccacgcccaagaacagcgtggtcaacaagtacctg
caaagctgggatgtgcccaacgtgttcgtctacggcgcctgcgccttcccgcagaacatg
ggctacaacccgaccgggctggtcacggcgctggcgtatcactctgccaaggccatccgt
gagcagtatctgaaaaaccccggcccgctggtgcaggcataa
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