Herbaspirillum seropedicae SmR1: Hsero_3581
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Entry
Hsero_3581 CDS
T01268
Symbol
ubiD
Name
(GenBank) 3-polyprenyl-4-hydroxybenzoate decarboxylase protein
KO
K03182
4-hydroxy-3-polyprenylbenzoate decarboxylase [EC:
4.1.1.98
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00130
Ubiquinone and other terpenoid-quinone biosynthesis
hse01100
Metabolic pathways
hse01110
Biosynthesis of secondary metabolites
hse01240
Biosynthesis of cofactors
Module
hse_M00117
Ubiquinone biosynthesis, prokaryotes, chorismate (+ polyprenyl-PP) => ubiquinol
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00130 Ubiquinone and other terpenoid-quinone biosynthesis
Hsero_3581 (ubiD)
Enzymes [BR:
hse01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.98 4-hydroxy-3-polyprenylbenzoate decarboxylase
Hsero_3581 (ubiD)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
UbiD
UbiD_C
UbiD_N
Motif
Other DBs
NCBI-ProteinID:
ADJ65060
UniProt:
D8IQE8
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All DBs
Position
complement(4109125..4110609)
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AA seq
494 aa
AA seq
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MKYTDLRDFISQLQQKGELKRVSHPVSSHLEMTEICDRTLRAEGPALLFEHVDQKNIPVL
ANLFGTPHRVALGMGADNIGELRRIGHLLARLKEPEPPKGIKDVLDLGSLVKSLWDMAPK
ERGSAPCQDVVWEGKDVDLSRLPIQHCWPGDIAPLITWGLVVTKGPHKKRQNLGIYRQQV
LGPNKVIMRWLAHRGGALDFREHCIANPGKPYPVVVALGADPATILGAVTPVPDNLSEYQ
FAGLLRGSRTELVKAMGSELRVPASAEIVLEGHIYPDEKHASGFEHALEGPYGDHTGYYN
EQDWFPVFTIDRITMRRDAIYHSTYTGKPPDEPAVLGVALNEVFVPLLQKQFAEITDFYL
PPEGCSYRMAVVQMKKSYAGHAKRVMFGVWSFLRQFMYTKFIVVVDEDVNIRDWKEVIWA
ITTRVDPVRDTVMVDNTPIDYLDFASPISGLGSKMGIDATNKWPGETSREWGTPIVMDED
VKKRVDAIWQDLGI
NT seq
1485 nt
NT seq
+upstream
nt +downstream
nt
atgaaatacactgatctacgcgattttatttcccagttgcaacaaaaaggggagctcaag
cgtgtttctcaccctgtttcctcgcatctggagatgaccgagatctgcgatcgcaccctc
cgggcggaaggtccggcgcttctttttgagcatgtcgatcaaaaaaatatcccggtgctt
gccaatcttttcggtacaccgcaccgtgtggcgctgggcatgggggccgacaatatcggc
gagctgcgccgcatcggccacctgctggcgcgtctgaaggagcctgagccgcccaagggc
atcaaggatgtgctcgatctcggttcgctggtgaagtcgctgtgggacatggcgcccaag
gaacgcggctcggcgccttgccaggacgtggtgtgggaaggcaaggatgtggacctgtcg
cgcctgccgatccagcattgctggccgggcgacattgcgccactgatcacctggggcctg
gtggtcaccaaggggccgcacaagaagcgccagaacctgggcatctaccgccagcaggtg
ctggggccgaacaaggtcatcatgcgctggctggcccaccgcggtggtgcgctggatttc
cgcgagcactgcatcgccaatccgggcaagccctatccggtcgtggtggcgctgggcgcc
gacccggccactatattaggtgcggtcacgccggtgccggacaacctgtccgaataccag
tttgcaggcctcttgcgcggcagccgcaccgagctggtcaaggccatgggcagcgagctg
cgcgtaccggcctcggccgagatcgtgctggaggggcatatctatccggatgaaaagcat
gcctccggattcgagcatgctttggaaggtccctatggcgaccacaccggttactacaat
gagcaggactggttcccggtcttcaccatcgaccgcatcaccatgcggcgcgacgccatc
tatcactccacctataccggcaaaccgcccgatgaaccggccgtgctgggcgtggccctc
aatgaggtgttcgtgccgctgctgcagaagcagtttgccgagatcaccgatttctatctg
ccgccagaaggttgcagctaccgcatggcggtggtgcagatgaagaagtcctatgccggg
cacgccaagcgggtgatgttcggagtatggagtttcctgcgccagttcatgtataccaag
ttcatcgtggtggtggacgaggatgtgaatatccgcgactggaaggaagtgatctgggcc
attaccacgcgggtcgatccggtgcgcgacaccgtcatggtggataacacgcccatcgat
tacctcgatttcgcctcgcccatcagcggcctgggcagcaagatggggatcgacgccacc
aataaatggccgggtgaaaccagtcgtgaatggggtacgcccatcgtcatggacgaggac
gttaagaagcgtgtggacgccatctggcaagacctgggcatctga
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