Herbaspirillum seropedicae SmR1: Hsero_3986
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Entry
Hsero_3986 CDS
T01268
Symbol
pcaH
Name
(GenBank) protocatechuate 3,4-dioxygenase beta chain protein
KO
K00449
protocatechuate 3,4-dioxygenase, beta subunit [EC:
1.13.11.3
]
Organism
hse
Herbaspirillum seropedicae SmR1
Pathway
hse00362
Benzoate degradation
hse01100
Metabolic pathways
hse01120
Microbial metabolism in diverse environments
hse01220
Degradation of aromatic compounds
Brite
KEGG Orthology (KO) [BR:
hse00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
Hsero_3986 (pcaH)
00624 Polycyclic aromatic hydrocarbon degradation
Hsero_3986 (pcaH)
Enzymes [BR:
hse01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.3 protocatechuate 3,4-dioxygenase
Hsero_3986 (pcaH)
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GFIT
Motif
Pfam:
Dioxygenase_C
PCDO_beta_N
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
ADJ65457
UniProt:
D8ISP1
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Position
4572141..4572833
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AA seq
230 aa
AA seq
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MQFDAIEPGVYPELIYPPYKSTVKRGPTQAPLRVRDEIATGTNLFASPKLILPHDMDLTK
QGKGEPLGEKIVVTGRVVDEDGKPVRNSLLEVWQCNAAGRYFHKKDQHDAPLDPNFTGFG
KMLTDDNGRYRFVSIKPGPYPWGNHHKAWRPAHIHFSLFGNVYAQRLVTQMYFPNDPLFA
YDPIFQSIPDEAARQRLISRFSLEETVDDKMLGYEFDIVLRGRNATPMGI
NT seq
693 nt
NT seq
+upstream
nt +downstream
nt
atgcaattcgatgccatcgaacccggtgtctatccggaactgatctatcccccctacaag
tccaccgtcaaacgcggccccacgcaagcgccgctgcgcgtgcgcgacgagatcgccacc
ggcaccaacctgttcgcttcgcccaagctgatcctgccgcacgacatggacctcaccaag
caaggcaagggcgagccgctgggcgaaaagatcgtcgtcaccggccgcgtggtcgatgaa
gatggcaagccggtgcgcaactccctgctggaagtctggcaatgcaatgccgctggccgc
tacttccacaagaaggaccagcacgacgccccgctggaccccaacttcaccggcttcggc
aagatgcttaccgatgataacgggcgttaccgcttcgtctccatcaagccaggtccgtat
ccctggggcaatcaccacaaggcctggcgtccggcgcacatccacttctcgctgttcggc
aatgtgtatgcgcaacgcctggtgacgcagatgtatttccccaatgacccactgttcgcc
tacgacccgatcttccagagcatccccgacgaagccgcgcgccagcgcctgatctcgcgt
ttctcgctggaagaaacggtcgacgacaagatgctgggttatgaattcgatatcgtcctg
cgcggccgcaacgccacgcccatgggcatctga
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