Halanaeroarchaeum sulfurireducens M27-SA2: HLASA_1449
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Entry
HLASA_1449 CDS
T04261
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hsf
Halanaeroarchaeum sulfurireducens M27-SA2
Pathway
hsf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HLASA_1449 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsf03021
]
HLASA_1449 (rpoD)
Enzymes [BR:
hsf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HLASA_1449 (rpoD)
Transcription machinery [BR:
hsf03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HLASA_1449 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_L
RNA_pol_A_bac
Thioredoxin_14
Motif
Other DBs
NCBI-ProteinID:
ALG82338
UniProt:
A0A0F7PEA3
LinkDB
All DBs
Position
complement(1412898..1413644)
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AA seq
248 aa
AA seq
DB search
MAGDFDVEFIEHENRDARFLVRGITPALANGIRRAMLADVPTLSIDTVRFVENSSVMFDE
QLALRLGLVPLTTPEGEFEEGEEVTLALDVQGPGTAYSGDLVTADPMVEPADTNIPIIEL
KEDQRLELEADAVLGRGRDHAKHQGGVAIGYRNLQHVEVVGDAAEYGDSEAQMVRGVIEE
DGELIPAESFDNDLRNRYPEKEVEVNDVEDAFVFHVETDGSMSVEELVLRAVDTLYDRAA
ELEQAVQL
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
atggcaggagacttcgacgtcgaattcatcgaacacgagaaccgggacgcccggttcctc
gttcgcggtatcacgccagcgctcgccaacggcatccgccgggcgatgctggccgacgtc
cccacgctctccatcgacaccgttcggttcgtcgagaattcgagcgtgatgttcgacgag
cagctcgcactccgactggggctggtccccctgaccaccccggagggcgagttcgaggag
ggtgaggaggtcaccctcgcactcgacgttcagggacccggcaccgcctactcgggcgac
ctggtcaccgcggatccgatggtcgagccggcggacacgaacattccgatcatcgagctc
aaagaggaccagcgtctcgaactcgaggccgacgcagtcctcggtcgtggtcgcgaccac
gccaaacaccagggcggcgtcgcgatcggataccgcaatctccaacacgtcgaggtcgtc
ggcgacgcagcggaatacggggacagtgaggcccagatggtccgcggcgtcatcgaggag
gatggcgagctgatccccgcagagtccttcgacaacgatctgcgaaaccgatacccggag
aaggaagtcgaagtgaacgacgtagaggacgcctttgtcttccacgtcgagacggacgga
tcgatgtccgtcgaagagctggtgctccgagcggtcgacacgctgtacgaccgcgcagcg
gagctcgagcaggccgtccagctataa
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