Histophilus somni 2336: HSM_1004
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Entry
HSM_1004 CDS
T00673
Name
(GenBank) protein of unknown function DUF752
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
hsm
Histophilus somni 2336
Brite
KEGG Orthology (KO) [BR:
hsm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsm03016
]
HSM_1004
Enzymes [BR:
hsm01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
HSM_1004
Transfer RNA biogenesis [BR:
hsm03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
HSM_1004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
Pyr_redox_2
Pyr_redox_3
HI0933_like
NAD_binding_8
FAD_binding_2
WH1
NAD_binding_7
Motif
Other DBs
NCBI-ProteinID:
ACA30714
UniProt:
B0UT85
LinkDB
All DBs
Position
complement(1143466..1145496)
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AA seq
676 aa
AA seq
DB search
MFTVTPAKIYLNQEKTPVSEQFNDVYFSNQDGLAESEYVFQQGNHLWERWIVYQEKHFVI
AETGFGTGLNFLAVTSLFRQFRQQYSHSPLKHLFFISFEKYPLPKVQLQQIHQFYPQFSA
LSQQLCDYCLEAIQGCQRFHFAETTLDLWFGDIVDNLPQLGDYMQNRIDAWFLDGFSPSK
NPQMWNDELYQQMFYYSKPQGTFSTFTAASAVRKGLVSAGFEVQKRKGYGKKRECLCGIK
NAIPQQNTKAPWYLSQPASLLSEDIAIIGGGIASLFTALSLLKRGAKITLYCEDEQLALN
ASGNKQGAFYPQLSDDDDRNIRFYVHAFFYALQQLQWAIKQGIEFEHEFCGVALCAYDHK
SAVKLAKISSYQWSKSLYQNLNKEQLSEKIGLPLDCAGGFIPQGGWLAPRQFVQNTFSYL
QQLGLEIKTSQKITALDYRNLQWVLTNEQNETFNHQVVVLANGYQITDFVQTAKLPLYPV
RGQVSQIPTSANLLKLKSVLCYDGYLTPADKMKQSHCLGASHIRNNKDRHFSHQEQRENQ
QKIQQNLASTDTDKNMDWLQDIDISANIARIGVRCSVRDRVPIMGNVPHFEQQCLDYRNI
FNLRRRKQPIPDAAQWKNLYLIGALGSRGLTSAALLGETLASLIYAEPLPLSEDILHNLS
PNRSWIRKLLKGTEIK
NT seq
2031 nt
NT seq
+upstream
nt +downstream
nt
atgtttacagttacacccgccaaaatttacctgaatcaagaaaaaacaccggtatcagaa
caatttaatgacgtttatttttccaaccaagacggtttagcagaaagcgaatacgtattt
cagcaaggtaatcatttatgggaacgctggattgtctatcaagaaaaacattttgtcatt
gcagaaacaggatttggtacaggtttaaattttcttgccgtaacaagtttatttcgccaa
tttcggcaacaatattctcattccccacttaaacatttattttttatttcctttgagaaa
taccctcttcccaaagttcaactacaacaaattcatcaattttacccacaattttctgct
ttatcacaacaattatgcgattattgcttagaggcgatacaaggttgtcaacgttttcat
tttgctgaaacaacattggatttatggtttggtgatattgtcgataatttgccccaactg
ggtgattatatgcaaaatcgtattgatgcttggtttttagatggtttctcacccagtaaa
aatccacaaatgtggaatgatgaactctatcaacagatgttctattacagcaagccacaa
ggaacattttccacatttaccgctgcaagtgcggtcagaaaaggattagtttctgccgga
ttcgaagtacaaaaacgaaaaggttacggcaaaaagcgggaatgtttatgtggtattaaa
aatgctattccacaacaaaatacaaaagccccttggtacttaagtcagcccgcctcatta
ctttctgaagacattgcaattatcggaggcggaatcgcttcacttttcaccgcactttca
ctattaaaaaggggggcaaaaatcactctttattgtgaagatgagcaacttgccctcaat
gcctccggtaacaaacaaggtgctttttatccccaattaagtgatgacgatgatcgcaac
attcgtttttatgttcatgcctttttctatgctttacaacaattgcagtgggcaattaaa
caaggtatagaatttgaacatgaattttgtggtgtagcactttgtgcttacgatcacaaa
agtgcggttaaattggcaaaaatttcttcttatcaatggtcaaaaagcttgtatcagaat
ttaaataaagagcagttaagtgaaaaaatagggcttcctttagattgtgcaggaggtttt
attccgcagggaggttggcttgctccacgtcaatttgtgcaaaatactttctcttactta
caacaacttggattagagatcaaaacctcacaaaaaattaccgcacttgactaccgaaat
ttacaatgggttttaaccaatgaacaaaatgaaacctttaatcatcaagttgttgtactc
gccaatggttatcaaattacagattttgtgcaaacagctaaacttcctctttatcccgta
cgaggtcaagtcagccaaattccgaccagtgcaaatttactgaaacttaagtccgtactt
tgttacgatggctatttaactccggcggataaaatgaaacagagtcattgccttggtgca
agtcatattcgcaataacaaagatcgccattttagccatcaagaacaacgggaaaatcag
caaaaaattcaacaaaatctagcttctaccgatacggataaaaatatggattggttgcag
gatattgatatatcagccaatatagctagaataggtgttcgttgttcagtgcgtgatcgt
gtgccgattatggggaatgtacctcattttgagcaacaatgtttagactaccgaaacatc
ttcaatttacgtcgtcgtaaacagcctattcctgatgcagcacaatggaaaaatttatat
ctcatcggtgcgttaggttcaagagggttaacttcagccgctttattaggtgaaaccctt
gcctctctgatttatgcagaaccactccctttgagcgaagatattctacataatctcagc
ccaaatcgcagttggatacgtaagttattaaaaggaactgaaattaaataa
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