Hippoglossus stenolepis (Pacific halibut): 118109914
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Entry
118109914 CDS
T08308
Symbol
polr2c
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB3
KO
K03011
DNA-directed RNA polymerase II subunit RPB3
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp03020
RNA polymerase
hsp03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
118109914 (polr2c)
09124 Replication and repair
03420 Nucleotide excision repair
118109914 (polr2c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsp03021
]
118109914 (polr2c)
03400 DNA repair and recombination proteins [BR:
hsp03400
]
118109914 (polr2c)
Transcription machinery [BR:
hsp03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
118109914 (polr2c)
DNA repair and recombination proteins [BR:
hsp03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
118109914 (polr2c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
Motif
Other DBs
NCBI-GeneID:
118109914
NCBI-ProteinID:
XP_035013268
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All DBs
Position
5:2456200..2460323
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AA seq
275 aa
AA seq
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MPYANQPTVKITDLTDENVKFVIENTDLAVANSIRRVFMSEVPTIAIDWIQIDANSSVLH
DEFIAHRVGLIPLTSDDIVDKLQYSRDCTCDDFCPECSVELTLDVRCTDDQTRHVTSRDL
LSNNPRVIPVTSRSRDNDPNDYVEQYDILLVKLRKGQELRLRAYAKKGFGKEHAKWNPTA
GVSFEYDPDNALRHTVFPRPEEWPKSEYSEIEEDEVQATYDPNGKPERFFYNVESCGSLR
PETIVMSALAVLKKKLSDLQTQLSHEIQSDVLTIN
NT seq
828 nt
NT seq
+upstream
nt +downstream
nt
atgccgtatgcgaaccaaccgacggtgaaaatcactgacctcacagacgaaaatgtcaag
ttcgtcattgaaaacaccgacttagcggttgcaaattccatccgtcgtgtcttcatgtca
gaggttcccactatagcaatagattggatccagatcgatgccaattcctcagtactgcac
gatgagttcatagcacacagagttggtctcatacctctcacaagtgatgacattgtggac
aagctgcagtattctagggactgtacctgtgatgatttctgtccagagtgttctgttgag
ttgacactggacgttcgatgcaccgacgatcagacgcgccacgtcacctcacgtgacctt
ctgtccaacaaccccagagttatcccggtgacttccaggagtcgagacaatgatcccaat
gactacgtcgaacaatatgatattttgctggtgaagcttcgtaaaggtcaggaactgcga
ctcagggcatacgcaaagaaaggctttggtaaggagcacgccaagtggaacccaacagca
ggggtgtccttcgagtatgacccagacaacgcactacggcacacagtcttcccacgacct
gaggagtggccaaagagtgaatactcagagattgaggaggatgaggttcaggctacctat
gaccccaatggaaaaccagaaagattcttttacaacgtggagtcatgcggctctctgcgg
ccagagaccatcgtcatgtcagcactggccgtcctcaagaagaagctgagtgacctgcag
acgcagctcagccatgagatccagagtgatgtgctcaccatcaactga
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