Hippoglossus stenolepis (Pacific halibut): 118110982
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Entry
118110982 CDS
T08308
Symbol
si:dkey-72l14.3
Name
(RefSeq) glyco_hydro_56 domain-containing protein
KO
K01197
hyaluronoglucosaminidase [EC:
3.2.1.35
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00531
Glycosaminoglycan degradation
hsp01100
Metabolic pathways
hsp04142
Lysosome
Module
hsp_M00076
Dermatan sulfate degradation
hsp_M00077
Chondroitin sulfate degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118110982 (si:dkey-72l14.3)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118110982 (si:dkey-72l14.3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
hsp02042
]
118110982 (si:dkey-72l14.3)
00536 Glycosaminoglycan binding proteins [BR:
hsp00536
]
118110982 (si:dkey-72l14.3)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
118110982 (si:dkey-72l14.3)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.35 hyaluronoglucosaminidase
118110982 (si:dkey-72l14.3)
Bacterial toxins [BR:
hsp02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
118110982 (si:dkey-72l14.3)
Glycosaminoglycan binding proteins [BR:
hsp00536
]
Heparan sulfate / Heparin
Enzymes
118110982 (si:dkey-72l14.3)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
hsp00537
]
Enzymes
118110982 (si:dkey-72l14.3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_56
MycE_N
Motif
Other DBs
NCBI-GeneID:
118110982
NCBI-ProteinID:
XP_035015078
LinkDB
All DBs
Position
6:18628531..18643577
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AA seq
574 aa
AA seq
DB search
MAWIEPRSRPDAEREGQLTPYNLRTQISAQAYSSTIPQVQPSILAPVLILLLTAFADLCV
AGPPQPARPPLLSGQPFIIFWGIPNSACSGRTDPRSFGMEQEGRVALFYEDMLGNYPYFV
DKDTPVNGGLPQHTRLDNHLQKTQLDLEAALPAPRYLGLGVLRWAEWSPQWFRNREKQIM
YLEASRNLLKNFFPSWTPEEVEKWSQVDFEAAAQAVMMETLREAKRLRPKALWGVSPYPS
CYNGNPAQTMLTNYTGQCPAAEMALNDELLWLWKRSSALYPLLTLEKLQGGTSGARLYLS
SQVREALRVSSLTGTAFDLPVFPLVKSVYTSTNTFLSQTDLVNTIGESAALGTAGVVIWE
RNETKTERECQDLAEFVRQVLGPYSINVTTATRLCSASLCQGKGRCVRQKPESSAYLHLQ
PPSEVVEKVTEKAEAAKATDQPDTDTKPAEPDPAEIWKKDFQCQWYKTADGDVSDQQPPK
DGTSFGGTVEVNTVEVVGTTTTASTTASTTASTIASTMKGAPVTESSSSLSSSVDTVSPS
PSLEVPTDGGTNPPSAPHLTVLLLLVIGRLCLEP
NT seq
1725 nt
NT seq
+upstream
nt +downstream
nt
atggcgtggatcgagccccgatcgcgtccagacgcagagcgagaaggacagctgacacct
tacaatctcaggactcaaatatccgcacaagcatattcatcaaccattcctcaggtccag
ccttcaattttagcacccgtcctcatcctgctgctcactgcctttgcagacctctgtgta
gctggtccaccccagccagcccggccccctctcctgtctggacagcctttcatcatcttt
tggggcatccccaactctgcctgctctggtaggacagatcccagatcttttgggatggag
caggagggccgggtggctctcttttacgaggacatgctggggaactacccgtattttgta
gacaaagacactccggttaatggggggctaccgcagcacacgcgacttgataaccacctc
cagaagacacagctggacttggaagcagctttacctgcaccgaggtatcttgggttgggg
gtgctgcgctgggcagagtggtccccccagtggttcaggaacagagagaagcaaattatg
tatctggaagcatcgaggaacctgctgaagaatttcttccctagctggactccggaggag
gtggagaagtggtctcaggtggacttcgaggcagccgcccaggcagtaatgatggagacg
ctacgggaggccaaaagattacggcccaaagcattatggggtgtctcaccttaccccagc
tgctacaacggcaaccctgcccaaaccatgctcaccaattacaccggccagtgccctgct
gcagagatggcccttaacgacgagcttctgtggctctggaaacgaagctccgccctctac
ccgctcctcactctggagaagctgcagggcgggacctcaggagccagactttatttatcc
agtcaagtaagagaagcactgcgagtatcatctctgactgggacggcgtttgatcttcct
gtattcccactggtcaagagcgtctacacctcaactaataccttcctctcacagacagac
ctggtcaacaccataggagaaagtgctgcattgggaacagctggagttgtcatctgggag
agaaatgagactaaaacagagagagagtgccaggacctggcagagttcgtccgccaggtc
ctcggaccatattccatcaatgtaaccacggcaactcggctttgctcagcttctctgtgc
cagggaaagggccgatgtgtgcgtcaaaaaccagaaagctccgcctacctccacctccag
cccccatctgaagtagttgagaaggtgacggaaaaggcagaggcagcaaaagccacagac
cagccagacacagacactaaaccagctgaaccagacccagctgagatatggaagaaagat
ttccagtgccagtggtacaagaccgcagacggagacgtctccgaccaacagccccccaaa
gacggaacgtcttttgggggaacagtagaagtgaacactgtagaagttgtgggaactact
acaacagcatctacaacagcatctacaacagcatctacaatagcttctacaatgaaaggt
gcccctgtgactgagtcaagcagttcactgagcagttcagtggatactgtgagtccatcg
ccttcactggaggtacctacagacggtggtacgaatcccccgagtgcccctcacctgact
gttctgctgctgctggtgattggacgtctgtgcctggaaccttaa
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