Hippoglossus stenolepis (Pacific halibut): 118114691
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Entry
118114691 CDS
T08308
Symbol
prdm6
Name
(RefSeq) putative histone-lysine N-methyltransferase PRDM6
KO
K20795
[histone H4]-lysine20 N-methyltransferase PRDM6 [EC:
2.1.1.361
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00310
Lysine degradation
hsp01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09105 Amino acid metabolism
00310 Lysine degradation
118114691 (prdm6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
hsp03000
]
118114691 (prdm6)
03036 Chromosome and associated proteins [BR:
hsp03036
]
118114691 (prdm6)
Enzymes [BR:
hsp01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.361 [histone H4]-lysine20 N-methyltransferase
118114691 (prdm6)
Transcription factors [BR:
hsp03000
]
Eukaryotic type
Zinc finger
Cys2His2 PRDM
118114691 (prdm6)
Chromosome and associated proteins [BR:
hsp03036
]
Eukaryotic type
Histone modification proteins
HMTs (histone methyltransferases)
HKMTs (histone lysine methyltransferases)
118114691 (prdm6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRDM2_PR
zf-C2H2
zf-H2C2_2
zf-C2H2_4
SET
zf-C2H2_jaz
zf-C2H2_11
Zap1_zf1
Motif
Other DBs
NCBI-GeneID:
118114691
NCBI-ProteinID:
XP_035021157
LinkDB
All DBs
Position
9:complement(28148501..28198670)
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AA seq
644 aa
AA seq
DB search
MLKPGDPSGSAFLKVDPSYLQHWQQLFPQAQLKAPLAPPPQPDRLSIPMDGLRPSRLHSH
LLASTHCTSSSSSTSSSVASSSAAVAAAAAALTPSSSLSISASQGLSQLPVPQQIALFGQ
ALAPVCAGPGGPGGGGGGPGGPGGGGDLLVVVPPENQQGHNPAMGFLHQAKEQSCGGVGV
VSSSVKSSSGGGGGEEGGKGATSRFKLTSEELDYYLYGQQRMEIIPLSNHTGEVNNRCDM
CADNRNGECPMHGPLHSLRRLVGTSSSAAPVTLPDVPDWLRDLPREVCLCTSTVPGLGYG
ICAAQRIPQGTWIGPFQGIPLLLDKLHGSMRNTRHLWEIYDTEGTLQHFIDGNDPSKSSW
MRYIRCARHCGEQNMMVVQYRSCIFYRACMDIPRGTELLVWYNDSYTSFFGIPLQCTAQD
ENLNVPATVVEAMTRQESLQSFSKNGKPSSSSSSSTPSTSLMRSMVFPHSPCPRTFSLLD
KVGIGLQSDSSFSQLASKNQRVLASPTSTSQLSSEFSDWHLWKCGQCFKTFTQRILLQMH
VCPQNPDRPYQCGHCSQSFSQPSELRNHVVTHSSDRPFKCGYCGRAFAGATTLNNHIRTH
TGEKPFKCERCDRSFTQATQLSRHQRLPNECKPVNESSESIEVD
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgctgaagccgggcgacccgagcggctcggccttcctgaaggtggacccgtcctacctg
cagcactggcagcagctcttccctcaggcgcagctgaaggcgcctctggctccgccgcct
cagcctgaccgcctctccatccccatggacggcctgcgcccgtcccgcctgcacagccac
ctcctggcctccacgcactgcacctcctcctcttcttctacgtcctcctcagtagcgtcc
tcttcagcagcagtagcagcagcagcagcagctctcaccccgtcctcctccctctccatc
tccgcctcccaagggctctcccagctgcccgtgccccagcagatcgctctctttgggcag
gcgttggccccggtgtgtgctgggcccggaggccccggaggaggaggaggtggaccagga
ggccctggaggaggaggagacctgctggtggttgtccccccggagaaccagcagggtcac
aacccagcgatggggttcctccatcaggccaaagagcagagctgtgggggggtgggggtg
gtgtcgtccagtgtgaagagcagcagcggaggaggcggcggcgaggagggcgggaaggga
gcaacgagcaggttcaaactgacgtcggaggagctggactactacctgtacggacaacag
aggatggagatcatcccactgagcaaccacacaggagaggtcaacaaccgctgcgacatg
tgtgcagacaacaggaacggcgagtgtccgatgcacgggcccctccactctctgcggcgc
ctcgtcggcaccagcagctcggcggctcccgtcaccctgccggacgtccctgattggctc
agagatctgcccagagaggtgtgtctgtgcacgagcacggttccaggtctgggttacggg
atctgtgcggctcagaggattcctcagggaacctggatcggtccatttcaggggatcccg
ctgctgctggacaaactgcatggatccatgaggaacacacgacacctgtgggagatctac
gacacagagggaacgttgcagcactttatcgatggtaatgatcccagtaaatccagctgg
atgaggtacatccgctgtgcccgacactgtggggagcagaacatgatggtcgtccagtac
aggtcgtgtatcttctacagagcctgtatggacatcccccgaggaacagagctgctggtc
tggtacaacgactcctacacgtccttcttcggcatcccgctgcagtgcaccgctcaggac
gaaaacttaaacgtcccagcgacagtggtggaggccatgaccaggcaggagtccctccaa
tccttcagcaagaacggcaaaccctcctcttcgtcttcctcctccaccccctccacctcc
ctcatgcgttccatggtcttcccccactccccctgcccgaggaccttctccctgttggac
aaggtcgggatcggactccagtcggactccagtttcagccagttggcgtcaaagaaccag
cgagtcctggccagtccgacgtccaccagccagctgagcagcgagttcagcgactggcac
ctgtggaagtgtggccagtgcttcaagaccttcacccagaggatcctgctgcagatgcac
gtctgtccacagaatcccgacaggccgtaccagtgtggtcactgctctcagtccttctct
cagccgtcagagttgaggaaccatgttgtgactcactccagcgaccgaccctttaaatgt
ggatactgcggccgagcgttcgccggcgccacgacgctcaacaaccacatccgcacgcac
acgggagagaagccgttcaagtgcgagcggtgcgaccgcagcttcacgcaggccactcag
ctcagccgtcatcagcgtcttcccaacgagtgtaaaccggtgaacgagagcagcgagtcc
atcgaggtggattaa
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