Hippoglossus stenolepis (Pacific halibut): 118118334
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Entry
118118334 CDS
T08308
Symbol
gad1b
Name
(RefSeq) glutamate decarboxylase 1b isoform X1
KO
K01580
glutamate decarboxylase [EC:
4.1.1.15
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00250
Alanine, aspartate and glutamate metabolism
hsp00410
beta-Alanine metabolism
hsp00430
Taurine and hypotaurine metabolism
hsp00650
Butanoate metabolism
hsp01100
Metabolic pathways
Module
hsp_M00027
GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00650 Butanoate metabolism
118118334 (gad1b)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
118118334 (gad1b)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
118118334 (gad1b)
00430 Taurine and hypotaurine metabolism
118118334 (gad1b)
Enzymes [BR:
hsp01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.15 glutamate decarboxylase
118118334 (gad1b)
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Gene cluster
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Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Beta_elim_lyase
SepSecS
Chlam_OMP3
Motif
Other DBs
NCBI-GeneID:
118118334
NCBI-ProteinID:
XP_035027357
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All DBs
Position
11:7037679..7055075
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AA seq
583 aa
AA seq
DB search
MATSEPRATGGDQDPNTANLRPPSTTNEYAWMHGCTRKLGMKICGFLQKNNSMEEKGRLT
GQKNLLSCDNSDREPGFRHTETDFSNLFARDLLPAKNGEEPTIQFLLEVVDILTNYVKKT
FDRSTKVLDFHHPHQLLEGMEGFNLELSDQPESLEQILVDCRDTLKYGVRTGHPRFFNQL
SSGLDIIGLAGEWLTSTANTNMFTYEIAPVFVLMEQLTLKKMREMIGWPSGEGDGLFSPG
GAISNMYSVMMARYKYFPEVKTKGMSAAPRLVLFTSEHSHYSIKKAGAALGFGTENVILL
STDERGRVIPADLEAKILDAKQKGCVPLFVNATAGSTVYGAFDPINEIADICEKYNLWLH
VDGAWGGGLLMSRKHRHKLSGVERANSVTWNPHKMMGVPLQCSAILVREKGILAGCNSMC
AGYLFQPDKQYDVTYDTGDKAIQCGRHVDIFKFWLMWKAKGTIGFEQHIDRCLDLSQYLY
NKIKNREGYEMVFDGEPQHTNVCFWYIPPSLRGMPEGDERREKLHMVAPKIKAMMMESGT
VMVGYQPQGNKVNFFRMVVSNLAVTQSDIDFLTDEIERLGHDL
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
atggctacgtctgaaccgagagccaccggcggggaccaggaccccaacaccgccaattta
agacctccgtccacaactaacgaatatgcgtggatgcacggatgcacacggaaactgggg
atgaagatctgtgggttcctgcagaagaacaacagcatggaggagaagggaaggctcaca
ggccagaagaatctactgtcctgtgacaacagtgaccgggagccaggcttccgccacacc
gagaccgacttctccaacctgttcgcacgagacctgctgccggccaagaatggagaggag
cccaccatacagtttctattggaggtggtcgacatcctcaccaactacgtcaagaagacc
ttcgaccgctccaccaaggtgctggacttccaccaccctcaccagctgctggagggcatg
gagggcttcaacctggaactgtccgaccagcccgagtccctggagcagatcctggtggac
tgcagggacacgctcaagtatggcgtccggacaggtcacccgcgctttttcaaccagttg
tcctctggtctggacatcatcggtctggctggagagtggctcacctccaccgccaacacc
aacatgttcacctatgagattgctccagtgtttgtgttgatggagcagctgactctgaag
aagatgagagagatgattggttggcccagcggagagggggacggcctcttttcaccaggg
ggcgctatctccaacatgtacagcgtgatgatggcacgttacaagtatttcccagaggtc
aagaccaagggcatgtctgctgctccccgcctcgtcctcttcacatccgagcatagccac
tactccataaagaaggccggcgctgctctgggctttggcacggagaatgtgatcctgctg
agcacagatgagagggggagagtgattcctgcagatctggaggccaagatccttgatgcc
aaacagaagggttgcgtgccactgtttgtgaacgccacagctggttctaccgtgtacggt
gcatttgaccccataaatgagatcgctgacatctgtgagaagtacaacttgtggctgcac
gtggatggagcgtggggtggtggactgctgatgtccaggaagcatcgtcataaactcagt
ggagttgagagggccaactctgtcacatggaaccctcacaagatgatgggcgtgcctctg
cagtgctctgccatcctggtcagagagaaggggatcctggcaggatgtaactccatgtgc
gccggctacctgttccaaccagacaaacagtacgacgtcacatacgacacaggggacaag
gccatccagtgcggccgacacgtcgacatcttcaagttctggctcatgtggaaggccaag
ggcaccatcgggtttgagcagcacattgacaggtgtctggacctgtctcagtacctgtac
aacaagatcaagaacagggagggatatgagatggtgtttgatggagagccccagcacacc
aacgtttgcttctggtacataccacccagcctgagaggcatgccagagggtgatgagcgg
cgagaaaaactccacatggtggcgccgaagatcaaggccatgatgatggagtcagggacc
gtcatggtgggctaccaaccccagggcaataaagtcaacttcttccgtatggtcgtctcc
aacctcgcggtcacccagtctgacatcgacttcctcaccgatgagattgagaggctgggt
cacgacctgtag
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