Hippoglossus stenolepis (Pacific halibut): 118121429
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Entry
118121429 CDS
T08308
Symbol
glb1
Name
(RefSeq) beta-galactosidase
KO
K12309
beta-galactosidase [EC:
3.2.1.23
]
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp00052
Galactose metabolism
hsp00511
Other glycan degradation
hsp00531
Glycosaminoglycan degradation
hsp00600
Sphingolipid metabolism
hsp00604
Glycosphingolipid biosynthesis - ganglio series
hsp01100
Metabolic pathways
hsp04142
Lysosome
Module
hsp_M00079
Keratan sulfate degradation
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
118121429 (glb1)
09103 Lipid metabolism
00600 Sphingolipid metabolism
118121429 (glb1)
09107 Glycan biosynthesis and metabolism
00531 Glycosaminoglycan degradation
118121429 (glb1)
00604 Glycosphingolipid biosynthesis - ganglio series
118121429 (glb1)
00511 Other glycan degradation
118121429 (glb1)
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
118121429 (glb1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
hsp04147
]
118121429 (glb1)
Enzymes [BR:
hsp01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
118121429 (glb1)
Exosome [BR:
hsp04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
118121429 (glb1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_35
BetaGal_ABD_1
BetaGal_gal-bd
BetaGal_ABD2
Glyco_hydro_42
Plectin
Motif
Other DBs
NCBI-GeneID:
118121429
NCBI-ProteinID:
XP_035033185
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All DBs
Position
2:complement(19376035..19383826)
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AA seq
654 aa
AA seq
DB search
MSLPRAGNSLLLLLMLMFGPSLSAPRSFSIDYKNDCFRKDGEAFRYISGEIHYSRIPRVY
WKDRLLKMYMAGLNAVQTYIPWSFHEESPGQYNFTGDRDLPHFLKVAQDVGLLVILRAGP
YICAEWDMGGLPAWLLKKKNIVLRSSDPDYIAAVDRWMGKLLPMMKPYLYQNGGPIISVQ
VENEYGSYYTCDYNYLRHLTKLFRFHLGNEVVLFSTDGSGVSYLKCGTIQELYATVDFGP
GANVTAAFEAQRHAEPHGPLVNSEFYAGWLDHWGSPHSVVSTAQVAKYLNKILATGANVN
MYMFIGGTNFGFWNGANTPYAPQPTSYDFNAPLSEAGDPTDKYFAIREVISMYRKIPDGP
IPPKTPKYAYGAVKMTKLQTILDAVALLCFSGPVKSIYPLTFLDLNQAFGFVLYRTTLPV
ACNTPTPLSSPLNGVHDRAYVSIDGVAVGILERNKVLSINVTGKAGSQLDVLVENTGRIN
YGKQINDFKGLVTNLTLGKDDLTGWTMYSLSIDEAIKQGLIQEKEPPLSAPPPPAALSLP
AFYRGSFVIPDGIPDLPQDTFIKLPKWRKGQIWINGFNLGRYWPVRGPQVTLFVPASLLS
TAAPNNVTVLELEGAPCSSGPCTVEFTDTPILNATAPAHYKQRWGPFTREDLLD
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgcccagagctggaaactctctgctgctgctgctgatgctgatgtttggacct
tcactcagcgcccctcggtcgtttagcattgattacaagaacgactgctttcggaaagat
ggggaggcgtttcgttacatatcaggagaaatccactactccaggattcctagggtctac
tggaaagatcggctgctcaagatgtacatggcggggctgaatgccgtccagacgtacatt
ccgtggagcttccacgaggagtctccaggtcagtacaatttcaccggagacagggatttg
ccacatttcctaaaggtggcgcaggacgttggtttactggtgatcctccgggcgggaccg
tacatatgtgcagagtgggacatgggtgggctgccggcctggcttctcaagaagaaaaac
attgtgctgcggtcttcagatccagattacatcgcagcagtagaccggtggatggggaag
ctactgccgatgatgaaaccttatctgtatcagaacggtggtcccatcatctctgtgcag
gtggagaatgaatatggcagttactacacttgtgattacaactacctgcgacacctgacc
aagctgttccgcttccacctgggcaacgaggtggtgctcttctccacagatggaagtgga
gtctcctatttgaaatgtggcacaatacaagaactctatgccactgttgactttgggcct
ggtgcaaatgtaaccgctgcctttgaggcacagagacatgctgaacctcacggacctttg
gtgaactctgagttttacgccggctggctggaccactggggatcccctcactctgttgtc
tcgactgcccaagtggccaagtacctgaacaagatcctggccacgggagcaaacgtcaac
atgtacatgttcataggtggaacaaatttcggattctggaacggtgccaacaccccatac
gccccgcagcccaccagctacgacttcaatgccccgctctcagaggcaggagaccccacg
gacaagtactttgccatccgagaggtcatcagcatgtaccgcaagataccagacggaccg
attccaccgaaaactccaaagtatgcatacggtgctgttaaaatgacaaagctccagacg
atcctagatgcagtagcattactgtgtttctccggcccggtcaaaagcatctatcctctg
acgttccttgacctgaaccaggcttttggatttgtgctgtacaggacgactctgcctgtc
gcctgcaacacacccactccactgtcgtcccctctgaacggagtccatgaccgagcgtat
gtgtccatcgatggggtggccgttgggattctggaaaggaacaaagtcttgagcatcaat
gtgactgggaaggctggaagtcagctggacgtactggtggagaacacgggacgaatcaac
tatggaaaacaaatcaacgatttcaagggtttggtgaccaacctgactctggggaaggac
gaccttactggttggaccatgtacagtctcagtatagatgaagcaatcaagcagggcctc
atccaggaaaaagagcccccactatcagccccccctccgcctgctgctctctccctccca
gccttttacagggggagctttgtcatccctgacggcatcccagacctcccccaggacacc
ttcatcaaactgcccaaatggagaaagggccagatctggattaacggcttcaacctggga
cgttattggccagttcgaggcccccaggtgacgctttttgtcccggccagcctcctgagc
acggcggcccccaacaacgtgactgtcctggagctggagggggctccttgcagctcgggg
ccgtgcactgtggagttcaccgacacccccatcttaaatgcaacagcccccgctcactac
aagcagcgctggggcccgtttactagagaggatttgttggattga
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