Hippoglossus stenolepis (Pacific halibut): 124852364
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Entry
124852364 CDS
T08308
Symbol
notch1b
Name
(RefSeq) neurogenic locus notch homolog protein 1b isoform X1
KO
K02599
Notch 1
Organism
hsp
Hippoglossus stenolepis (Pacific halibut)
Pathway
hsp04330
Notch signaling pathway
Brite
KEGG Orthology (KO) [BR:
hsp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04330 Notch signaling pathway
124852364 (notch1b)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EGF
hEGF
EGF_CA
Ank_2
Ank
EGF_2
Notch
NOD
NODP
Ank_3
Ank_5
Ank_4
EGF_3
JAG1-like_EGF2
DL-JAG_EGF-like
Motif
Other DBs
NCBI-GeneID:
124852364
NCBI-ProteinID:
XP_047197161
LinkDB
All DBs
Position
9:24135968..24177766
Genome browser
AA seq
2518 aa
AA seq
DB search
MYMFLVKLTLLLSLIGQTRGLRCTESCLNQGKCETTPDGTGECKCRDGYIGSRCQFPDPC
TSSTCTNDGACHAFIRGSMVDFTCTCRLGYTDRHCQTPVSNVCISSPCRNGGTCELESLQ
TYKCRCPPGWSGKLCQQADPCASNPCANNGQCSAIESHYVCSCTSFFSGKTCKQDVNECD
AAPSPCKNGGVCVNEVGGYRCKCSQEYMGKHCESRYLPCSPSPCHNGGTCIQRGETSYEC
SCVPGFTGKNCNYNIDDCPNHRCEHGGTCVDGVNTYNCQCKPEYTGQLCTDDVDECQLMP
NACQNGGTCHNIHGSYQCVCVNGWTGDDCSENIDDCASAACHSGSTCHDRVASFFCQCPL
GRTGLLCQLDDACISNPCQKGSNCDTNPVNGNHFCTCPSGYFGASCDQDDDECALGSNPC
EHAGKCINTKGSFECKCQQGYMGPRCELDINECISNPCMNEATCLDQIGGFHCICMPGYA
GNFCEIDSDECANSPCLNNGKCIDKINSFDCQCPTGFTGNLCQIDIDECASTPCKNGAKC
TDGANKYTCECTEGYSGRHCETDINECYSDPCHYGTCVDGLASFSCNCKPGYTGRLCETN
INECLSQPCRNGGTCQDQENSYICSCHKGTTGINCEINIDDCKSNPCDYGTCIDKINGYE
CACEPGYTGTMCNINIDECAINPCHNGGTCIDGINGFTCVCPEGYHDATCFSQVNECLSN
PCIHGDCNDKINGYKCLCDPGWSGKNCDINNNECESNPCMNGGTCKDMTSGYVCTCRMGF
TGPNCQTNINECASNPCLNQGTCIDDVAGYKCNCVLPYTGDNCETLMAPCSSKPCKHGGM
CQESEDYQSFSCVCPEGWQGQTCEVDIKECVKNPCLNGATCQNTLGSYRCGCKPGFTGRN
CETNVDDCKPNPCSNGGFCKDEVDGFLCTCLPGFRGTKCEEDINECESNPCKNGANCTDC
VNSYTCTCPAGFSGIHCENNTPDCTESSCFNGGTCMDGINTFTCLCPPGFTGSYCQHDIN
ECDSKPCLNGGTCQDSYGTYKCTCPHGYTGLNCQNLVRWCDLSPCKNGGTCWQRVTTYSC
ECETGWTGLYCDVPSVSCEVAAKQRGVDVAHLCRNSGQCLDAGNVHYCHCQVGYTGSYCE
EQVDECTPNPCQNGAACTDFLGGYTCKCMPGYVGTNCSDEINECFSQPCQNGGTCIDLIN
TYKCSCPRGTQGVHCEINMDDCNPFTDPVTKEPKCFNKGKCVDRVGGYHCICSLGYVGER
CEGDVNECLSNPCDPRGTHSCIQLTNNYRCDCRTGYTGQRCDTVFDGCKGKPCRNGGTCA
VASNTPHGFICKCPPGFTGSTCEYDAQACGSLHCRNGGTCISGHKSPKCLCTPSFTGPEC
QYPTDSPCNSNPCYNGGTCEYTSEAPYYHCVCPTDFNGLRCHILDYSFLGGFGHDIPPPS
EVEVECGIPQCKEHKHNNFCDVLCNNHECGWDNGDCSLNFNDPWKNCSASLQCWRYFNNG
VCDSQCDNAGCLYDGFDCQNLEGQCNPLYDQYCKDHYADGHCDQGCNNAECEWDGLDCAN
NMPEKLAVGQLVVVVHIAPELLLSNSSAFLRELSRVLRTNVVLRKDSKGEVMVYPYYGNE
HELRKYNVKRSVDSWSEAPAKVLDVVKRSLYDAAGGSRRMRRELDHLQIKGSIVHLEVDN
RQCFQQSTECFQSTNDAAAFLGALASSGKLDVPYTIKAVFSDVDQKLSPNLYPIYLVLGG
VGILAFLGVGMVAARKRRHEHGRLWLPEGFKTTETSKKKRREPVGEDSVGLKPLKNTSDI
SLMDDAQTDWGEDEPSDAKRFRQFDEQAILEVDDQTDHRQWTQQHLDAADLRVPSIAPTP
PQGEIENDCMDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDASANVINDFIYQGANLH
NQTDRTGETALHLAARYARSDAAKRLLEASADANIQDNMGRTPLHAAVAADAQGVFQILI
RNRATDLDSRMHDGTTPLILAARLAVEGMVEELINCHADVNAIDDFGKSALHWAAAVNNV
EAAIVLLKNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFANREITDHMDRLPRDIA
QERMHHDIVRLMDEYNLVRSPPMHVGSLSTTLSPPLCSPNGYLGGMKQQHSHGQGKKARK
PSTKGIGCKDGKDMKAKKKISQDGKSGNLLDSSAVLSPVDSLESPHGYVSDVASPPMMTS
PFQQSPSVSLNHLQGMSDPHLPVNHMVMPNKQELARMQFDPLPPRLTHLPVSGSGGQGAM
NGQCDWLSRMHGNMGQQGQFNPMRGGPGSQGGLHQGGQHGLMTALHNGHTATSLSQMMTY
QGIQGTRLAPQPLIMQQQAQQMQQMQNLQQLQQQQQQQQQQQNIQLQHQNSNSANSQSFI
SGELSSPELQQGTGSSSMPIHTILPQETQIMPSAINQSMASTQFLTPPSQHSYSGPMDNT
PNHQVQVPDHPFLTPSPGSPDQWSSSSPHSNLSDWSEGISSPPTSMQAQIGHIPEQFK
NT seq
7557 nt
NT seq
+upstream
nt +downstream
nt
atgtatatgttcttggtcaaactaactctcctgctgtcgctgatcggacaaacacgaggc
ctgagatgcaccgagtcgtgtttgaaccaggggaaatgtgaaacgactccagatgggacc
ggagagtgcaagtgccgggacggatacataggaagccgttgccagtttcctgacccgtgc
acctcctcgacatgcaccaacgacggcgcgtgtcatgccttcatcagggggagcatggtg
gacttcacctgcacctgcagactgggctacaccgaccgccactgccagacgcccgtcagc
aatgtctgcatcagctcgccgtgtcgcaacggagggacctgcgagctcgagagcctccag
acgtacaagtgccgctgcccgcccggatggtcaggtaaactctgccaacaagccgacccc
tgcgcctcgaacccgtgtgccaacaacggccagtgctctgccatcgagtcccactacgtc
tgctcctgcacgtcgttcttctccggcaagacctgcaaacaggacgtcaacgagtgcgat
gcagccccgtcgccctgcaagaacggcggcgtgtgcgtcaatgaggtcggcggctacaga
tgcaagtgttcgcaggagtacatgggcaagcactgcgagagccgctacctgccgtgcagc
ccgtcgccctgccacaacggaggcacctgcatccagaggggagagaccagctacgaatgc
tcctgcgtgccaggttttactgggaaaaactgcaactacaacatcgacgactgccccaat
cacaggtgcgagcatggggggacgtgtgtggacggagtcaacacctacaactgccagtgt
aaaccggaatacacaggtcagctctgcaccgatgacgttgacgagtgccaactcatgccc
aacgcctgccaaaacggcggcacgtgccacaacatccacggcagctaccagtgtgtgtgt
gtaaacggctggaccggggacgactgcagcgagaacatcgacgactgtgccagcgccgca
tgccactccggctccacctgccacgaccgcgtggcgtctttcttctgtcaatgccccctt
ggccgcacaggtttgctgtgccagctggacgacgcctgcatcagtaacccgtgtcagaag
ggctccaactgtgacaccaaccccgtcaatggaaaccatttctgtacctgcccctcggga
tacttcggtgcttcctgcgaccaggatgacgatgagtgtgctctgggctccaacccgtgt
gagcacgcggggaagtgcatcaacaccaagggctcgttcgagtgcaagtgccagcagggt
tacatggggccgcggtgcgagctggacatcaacgagtgcatttccaacccctgcatgaat
gaggccacctgcctggaccagataggaggcttccactgcatctgcatgccaggctacgcg
gggaacttctgcgagatcgattcggacgagtgcgccaacagcccctgcctgaacaacggc
aagtgtatcgacaagatcaactccttcgactgccagtgccccacaggcttcactgggaac
ctctgccagatagacatcgatgagtgtgccagcacaccgtgcaaaaatggcgccaaatgc
acagacggcgccaacaagtacacctgcgagtgcactgaaggttacagcgggagacactgt
gagacggacatcaacgagtgttactcggacccctgccactacggcacctgcgtcgacggc
ctggcctccttcagctgcaactgcaaacctggatacacgggccggctgtgcgagaccaac
atcaacgagtgcctgagccagccgtgcaggaacggaggcacctgccaggaccaggagaac
tcctacatctgcagctgccacaagggaaccacaggaatcaactgtgaaatcaacatagac
gactgcaagagcaacccctgtgactacgggacctgcatcgacaagatcaatggctacgag
tgtgcatgtgaaccgggctacaccggcaccatgtgtaacatcaacatcgacgagtgcgcc
atcaacccctgccacaacggcggcacctgcatcgacggcatcaacggcttcacctgcgtg
tgtccggagggttaccatgacgccacctgcttctcccaggtcaacgagtgtctcagcaac
ccctgcatccacggtgactgcaacgacaagatcaacggctacaagtgtctgtgtgatcct
ggctggagcggcaagaactgtgacatcaacaacaacgagtgtgaatccaacccgtgcatg
aatggaggcacctgcaaggacatgaccagcggatacgtgtgcacctgtcgcatgggcttc
accggacccaactgccagaccaacatcaacgaatgtgcctccaacccctgcctcaaccag
gggacgtgcatcgacgacgttgccggctacaagtgcaactgtgtcctgccttacacggga
gataactgtgaaaccctgatggccccctgcagctccaagccctgcaaacatggaggaatg
tgtcaggagtctgaggactatcagagcttctcatgtgtctgtcctgaaggatggcaagga
caaacctgtgaggtggacatcaaggagtgtgtgaagaatccctgtctcaatggagcgacc
tgccagaacactctgggcagttaccgctgtggctgcaaaccgggcttcaccggacgcaac
tgtgaaaccaacgttgacgactgcaagcccaacccctgcagcaatggaggcttctgcaag
gacgaggtggacggcttcctgtgcacctgcctgcccggcttcaggggcacaaagtgcgag
gaggacatcaacgagtgcgagagcaacccgtgcaagaacggcgccaactgcaccgactgc
gtgaacagctacacgtgcacctgcccggccggcttcagcgggatccactgtgaaaataac
acccctgactgcacggagagctcctgcttcaacggcggcacctgcatggacggcatcaac
accttcacgtgtttgtgcccgcccggcttcaccggcagctactgccagcacgacatcaac
gagtgcgactccaaaccctgtctgaacggcggcacctgccaggacagctacggcacctac
aagtgcacctgccctcacggttacaccggactcaactgtcagaacttggttcgctggtgc
gacttgtccccctgtaagaacggaggaacctgctggcagcgggtcaccacttacagctgc
gagtgtgagaccggctggacgggcctttactgtgacgtccccagtgtttcctgcgaggtg
gcagccaaacagagaggagtcgatgtcgcccatctgtgtcgtaactcgggccagtgtctg
gacgcaggaaacgttcactactgccactgtcaggtgggatacaccgggagctactgtgag
gagcaggtggacgagtgcacgccgaacccctgccagaacggagccgcctgcaccgacttc
ttgggcggatacacctgcaagtgcatgccaggctacgtggggaccaactgctccgacgag
atcaatgagtgcttctcccagccgtgccagaacgggggcacctgcattgacctgatcaat
acctacaaatgctcctgtccccgcggaacccaaggcgtgcactgtgagatcaacatggac
gactgcaacccgttcaccgaccccgtcaccaaggagcccaagtgcttcaacaaaggcaag
tgtgtggatcgggtcgggggctaccactgcatctgctccttgggctacgtcggggagcgc
tgcgagggggatgtcaacgagtgcctgtccaacccatgtgacccgcggggcacgcacagc
tgcatccagctcaccaacaactaccgctgcgactgtcgcaccggatacacgggtcagcgc
tgcgacacggtgttcgacgggtgtaagggcaaaccttgtcgtaacggagggacctgtgct
gtcgccagtaacacgccacacggcttcatctgcaaatgtcctcctggcttcactggctcc
acgtgtgagtacgacgcccaggcctgcggcagccttcactgtcgcaatggaggcacctgc
atctccggccacaagagccccaagtgtctgtgcaccccgtcgttcaccgggcccgagtgc
cagtatcccaccgacagcccctgtaactcaaacccctgctacaacggcggcacgtgcgag
tacacctccgaggcgccgtactaccactgcgtctgccccacggacttcaacggcctccgc
tgccacatcctggattacagcttcctgggagggttcggccacgacatcccgccgccgtcg
gaggtggaggtcgagtgcgggatcccgcagtgcaaggagcacaagcacaacaacttctgc
gacgtgctctgcaacaaccacgagtgcggctgggacaacggcgactgttcgctcaacttc
aacgatccgtggaagaactgctcggcctcgctgcagtgctggcgctacttcaacaacggg
gtgtgcgactcgcagtgtgataacgccgggtgcctgtacgacgggtttgactgccagaat
ctggaaggtcaatgcaaccctctgtatgaccagtactgtaaggaccactatgccgacggc
cactgtgaccagggctgcaacaacgctgagtgtgagtgggacggcctggactgcgccaac
aacatgccggagaagctagcggtgggccagctggtggtggtggtccacatcgcgcccgag
ctgctcctcagcaactcctctgccttcctgcgcgaactgagccgcgtgctccggaccaac
gtggtgctcaggaaggacagcaagggcgaggtgatggtatatccgtactacgggaacgaa
cacgagctgaggaagtacaacgtgaagcgctcggtggactcgtggtcggaggctcccgcc
aaggtgctggacgtggtgaagaggagcctgtacgatgcggcaggagggagcaggaggatg
aggagggagctggatcacttgcagattaaaggttccatcgtgcacttggaggtggataac
cgtcagtgcttccagcagtccaccgagtgtttccagagcaccaacgatgctgccgccttc
ctcggggctctggcctccagtggaaaactggacgtcccctacaccatcaaagctgttttc
agcgacgtggaccaaaagctctcaccgaacctctaccccatctacctggtcctgggcggc
gtcgggatactggccttcctcggagtcgggatggtggctgcccgaaagcggcgccatgag
cacgggcgcctctggctccccgagggcttcaagaccacagagaccagcaagaagaagaga
cgtgagcctgtcggagaggattcagtgggattaaagccactgaaaaacacttcggacatt
tcgctgatggatgacgcccagacggattggggcgaggacgagccttcggacgcaaagcgc
ttcaggcagtttgacgagcaggcgatcctggaggtggacgaccagacggaccaccgccag
tggacccagcagcacctggacgccgctgacctgcgcgtcccctccatcgctcccacaccc
cctcagggcgagatcgagaacgattgcatggacgtcaatgtccggggaccagatggattc
acgcccctgatgattgcgtcctgcagcgggggaggtttagaaaccggcaacagcgaggaa
gaggaggacgcctccgccaacgtgatcaacgacttcatctaccaaggtgctaacctccac
aatcagactgaccgtacgggtgagaccgctcttcacctggccgcccgctacgctcggtcc
gacgctgcgaagcgcctgctggaggctagcgccgacgccaacatccaggacaatatgggc
aggacgcctctgcacgctgctgtggctgctgacgcccagggggttttccagattctgata
aggaaccgcgcaacagacttggattcccggatgcatgacggcaccacacccctgatcttg
gcggcccggctggcggtggagggtatggtggaggagctcatcaactgccacgctgacgtc
aatgcaatcgatgatttcggtaaatcagctctacattgggctgcagctgtaaataacgtt
gaggctgctattgtgcttcttaaaaacggtgccaacaaggacatgcaaaacaacaaggag
gaaacacctctgttcctggctgccagggagggaagctacgagaccgccaaggtcttactg
gaccacttcgccaacagggaaataactgaccacatggaccggctgcccagagacattgca
caggagagaatgcatcacgacatcgtgcgtctgatggacgagtacaacctggtacgaagt
cctcccatgcatgtagggtctctcagcaccactttgtcgccccctctttgctcgcccaac
ggttacctgggcggcatgaagcagcaacactctcatggtcaaggcaagaaggctcgcaag
cccagcaccaagggcatcggctgcaaggacggcaaagacatgaaggcgaagaagaagatt
tcccaggacgggaagtccgggaacctcctggacagctcggctgttctgtcacccgttgac
tcgttggagtctcctcacggctatgtttctgacgtggcctcgccgcccatgatgacctca
cctttccagcagtcgccatctgtatccctgaaccatctgcagggtatgtctgacccacac
ctgcctgtaaaccacatggtgatgccaaacaagcaggagctggctcgcatgcagtttgac
ccgcttcctccacgtctcacccatctgcccgtgtctggctccggtggccagggcgccatg
aacggccagtgtgattggctgtccaggatgcacggcaacatgggccagcaaggccagttc
aaccctatgaggggaggtcccggcagtcagggaggtctgcaccagggaggccaacacggg
ttgatgaccgccctccacaacggccacaccgccaccagcctgtctcagatgatgacctac
caggggatccagggcaccagactggctccgcagcccctcatcatgcagcagcaggctcag
cagatgcagcagatgcagaacctgcagcagctccagcagcagcagcaacaacagcagcag
cagcagaacatccagctgcagcatcaaaactcaaacagcgccaatagccagagcttcatc
agtggggagctgagttctccggagctccagcagggcacaggcagctccagcatgcccatc
cacaccatcctgccacaggaaacccagatcatgccctccgccatcaaccagtcaatggcc
agcacccagttcctcaccccaccctcccagcacagttattcaggccccatggacaacacc
ccaaaccatcaggtccaggtgcctgaccacccctttctaacgccctcccccggctccccc
gatcagtggtccagttcctcacctcattccaacctgtccgactggtcagagggcatctcg
agtccaccgacgagcatgcaggctcagattggacatatacctgaacagttcaaataa
DBGET
integrated database retrieval system
