KEGG   Hydractinia symbiolongicarpus: 130629690
Entry
130629690         CDS       T09218                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
hsy  Hydractinia symbiolongicarpus
Pathway
hsy03020  RNA polymerase
hsy03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsy00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    130629690
  09124 Replication and repair
   03420 Nucleotide excision repair
    130629690
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsy03021]
    130629690
   03019 Messenger RNA biogenesis [BR:hsy03019]
    130629690
   03400 DNA repair and recombination proteins [BR:hsy03400]
    130629690
Transcription machinery [BR:hsy03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     130629690
Messenger RNA biogenesis [BR:hsy03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     130629690
DNA repair and recombination proteins [BR:hsy03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      130629690
SSDB
Motif
Pfam: S1 SHS2_Rpb7-N RNA_pol_Rbc25
Other DBs
NCBI-GeneID: 130629690
NCBI-ProteinID: XP_057298981
LinkDB
Position
2:16641141..16644449
AA seq 172 aa
MFYHISLEHEILLHPRYFGPNLLHTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGYIQ
PGRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKAGLFTEIGPLSCFISRHSIPPDMEFD
ANSNPPCYKTQDEEVVIQQDDEIRLKIVGTRVDANDIFAIGTLMDDYLGLVS
NT seq 519 nt   +upstreamnt  +downstreamnt
atgttttatcatatttccttggagcacgaaattcttttgcatccaagatattttgggcct
aatcttttgcacaccgtaaagcagaaattgtttacagaggtagaaggtacatgtacagga
aagtatggttttgttatagctgtaacaactattgataatattggtgctggatacattcaa
ccaggccgaggatttgttgtatatccagtaaaatacaaagctatagtttttcgacctttt
aaaggagaagtgctagacgctgttgtaacacaagttaacaaagctggacttttcacagaa
attggaccattgtcttgtttcatttcaagacattcaattccaccagatatggaattcgat
gccaactccaatccaccttgttacaaaactcaagatgaggaagtagttattcagcaggat
gatgaaattcgtttgaaaatagttggaactcgagttgatgcaaatgacatctttgcaata
ggaacattgatggacgattacctgggacttgtcagttaa

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