Hydractinia symbiolongicarpus: 130629690
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Entry
130629690 CDS
T09218
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7
KO
K03015
DNA-directed RNA polymerase II subunit RPB7
Organism
hsy
Hydractinia symbiolongicarpus
Pathway
hsy03020
RNA polymerase
hsy03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
hsy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
130629690
09124 Replication and repair
03420 Nucleotide excision repair
130629690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsy03021
]
130629690
03019 Messenger RNA biogenesis [BR:
hsy03019
]
130629690
03400 DNA repair and recombination proteins [BR:
hsy03400
]
130629690
Transcription machinery [BR:
hsy03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
130629690
Messenger RNA biogenesis [BR:
hsy03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
130629690
DNA repair and recombination proteins [BR:
hsy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
130629690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
RNA_pol_Rbc25
Motif
Other DBs
NCBI-GeneID:
130629690
NCBI-ProteinID:
XP_057298981
LinkDB
All DBs
Position
2:16641141..16644449
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AA seq
172 aa
AA seq
DB search
MFYHISLEHEILLHPRYFGPNLLHTVKQKLFTEVEGTCTGKYGFVIAVTTIDNIGAGYIQ
PGRGFVVYPVKYKAIVFRPFKGEVLDAVVTQVNKAGLFTEIGPLSCFISRHSIPPDMEFD
ANSNPPCYKTQDEEVVIQQDDEIRLKIVGTRVDANDIFAIGTLMDDYLGLVS
NT seq
519 nt
NT seq
+upstream
nt +downstream
nt
atgttttatcatatttccttggagcacgaaattcttttgcatccaagatattttgggcct
aatcttttgcacaccgtaaagcagaaattgtttacagaggtagaaggtacatgtacagga
aagtatggttttgttatagctgtaacaactattgataatattggtgctggatacattcaa
ccaggccgaggatttgttgtatatccagtaaaatacaaagctatagtttttcgacctttt
aaaggagaagtgctagacgctgttgtaacacaagttaacaaagctggacttttcacagaa
attggaccattgtcttgtttcatttcaagacattcaattccaccagatatggaattcgat
gccaactccaatccaccttgttacaaaactcaagatgaggaagtagttattcagcaggat
gatgaaattcgtttgaaaatagttggaactcgagttgatgcaaatgacatctttgcaata
ggaacattgatggacgattacctgggacttgtcagttaa
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