Hibiscus syriacus (Rose-of-Sharon): 120118018
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Entry
120118018 CDS
T09559
Name
(RefSeq) sphingosine-1-phosphate lyase isoform X1
KO
K01634
sphinganine-1-phosphate aldolase [EC:
4.1.2.27
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00600
Sphingolipid metabolism
hsyr01100
Metabolic pathways
Module
hsyr_M00100
Sphingosine degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
120118018
Enzymes [BR:
hsyr01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.2 Aldehyde-lyases
4.1.2.27 sphinganine-1-phosphate aldolase
120118018
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyridoxal_deC
Aminotran_5
Motif
Other DBs
NCBI-GeneID:
120118018
NCBI-ProteinID:
XP_038994096
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All DBs
Position
Unknown
AA seq
543 aa
AA seq
DB search
MECYFSSFSSFIARFRVSANLFLSQFEPLALLLAPILTLVIARALQSLLSVIHDKGLKAT
LIGLFMTSVKLIPGVKSYIDAEQQKVVDKLQSGSKSKREDWRTELPITGFGPGIIEEMKD
AKSKDVDWQGKCSGTVYIGGSESEGHFSLINEACSMFAHTNPLHLDVFQSVGRFEAEVVA
MTADLLGSKEKASGGQICGNMTSGGTESILLAVKTSRDYMKMKKGITKPEMVIAESAHSA
YDKAAQYFNIKLRRVPVNKEFKADVKAIRQHINRNTIMIVGSAPGFPHGIIDPIEELGKL
ADSYGICFHVDLCLGGFVLPFARKLGYPIPPFDFTVKGVTSVSTDVHKYGLAPKGTSIVL
YRNHEIRKHQFVAVTEWSGGLYVSPTIAGSRPGALIAGAWAAMMALGQEGYLENTRKIME
ASKMIEKGIKEISELFIIGKPDMTLVAFGSSVLDIFEVNDIMSGKGWHLNALQRPNSLHI
CVTLQHVPVVDTFLHDLKEAVQTVKENPGPISGGLAPIYGAAGKMPDRGMVQELLVNYMD
GTC
NT seq
1632 nt
NT seq
+upstream
nt +downstream
nt
atggaatgttatttttcttcgtttagttcattcatagctcgcttcagagtttctgccaat
ctgttcctttcacaattcgaacctctggctctgcttctcgcccctatactcactctcgtt
atcgcacgtgcacttcaatcgcttctctccgttattcacgacaaagggctcaaggctacg
ctcataggcttgttcatgacttccgtcaagttgattcctggcgttaagagttatattgat
gcggaacaacaaaaggttgtggacaagttgcaatctggtagcaaatccaaacgagaagac
tggaggacagaattaccaatcacaggttttggaccaggtattatagaagaaatgaaagac
gcaaaaagcaaggatgttgattggcaaggaaaatgctccggtacagtctatattggtgga
agtgaatctgaaggacatttttctttgatcaacgaggcatgttcaatgtttgcgcatacc
aatccattacatttagatgtgttccagagtgtggggcgatttgaggctgaagtagtcgct
atgacagcggatctacttggcagtaaagagaaagcctctggaggacaaatatgtggaaac
atgacatcaggaggaactgagagcatactgttagccgtgaaaacatctcgggattacatg
aagatgaagaaggggattacaaagccagaaatggtaatagctgaatctgctcattcagca
tatgacaaggcagcacagtattttaacatcaagctccgtcgtgtccctgtcaataaggaa
ttcaaagcagatgtgaaagcaatcagacagcatattaacagaaacactataatgattgtt
ggatctgcacctgggtttcctcatggcatcattgaccctattgaggagctaggtaaattg
gctgatagctatggaatttgtttccatgttgacctttgtcttggtggctttgttttgcct
tttgctcgtaaactcgggtacccaattccaccatttgatttcactgttaagggagtaact
tcagtttcaactgatgtgcataaatatgggctggctcctaaaggaacaagcatagttctt
tacagaaatcatgaaattagaaagcatcaatttgtagctgttaccgagtggtcgggtggg
ctatatgtgtctccaaccatagctggaagcaggcctggagcgttgattgctggagcttgg
gcagcgatgatggctctaggacaagaaggctatttggagaatacaagaaaaatcatggaa
gcatcaaagatgattgagaaagggataaaggagatttctgagttgtttatcattggaaag
ccggacatgacactagtggcatttggatcttctgttctagacatatttgaagtcaacgat
atcatgtctggcaaaggttggcatttgaatgcattgcagaggcccaacagccttcatatc
tgtgtcactcttcaacatgtaccagttgttgataccttcctccatgatttgaaggaagcc
gtgcaaactgtgaaagaaaatccagggcctataagcggaggcctagcgcccatatacggt
gctgcagggaagatgcctgatcgaggcatggttcaagaattgttggtaaattacatggac
ggtacatgctga
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