Hibiscus syriacus (Rose-of-Sharon): 120119008
Help
Entry
120119008 CDS
T09559
Name
(RefSeq) ABC transporter D family member 1-like isoform X1
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
hsyr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120119008
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120119008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120119008
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
120119008
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
120119008
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_23
SMC_N
AAA_16
nSTAND1
FtsK_SpoIIIE
Mg_chelatase
Motif
Other DBs
NCBI-GeneID:
120119008
NCBI-ProteinID:
XP_038994853
LinkDB
All DBs
Position
Unknown
AA seq
1339 aa
AA seq
DB search
MPSQLLQLTEHGRNLLASRRNRLLLASGIVAAAGAVAYLQSRFSSNKSYSHGPYNGIRDD
SENSDKVLKKNNNVKRTRQKKGGLKSLKVLVTILLSKMGKVGARDLLALVGIVVLRTALS
NRLAKVQGFLFRAAFLLRVPSFFRLISENILLCFLLSTIHSTSKYITSTLSLRFRKILTT
LIHAHYFENMAYYKISHVDGRVRNPEQQIASDIPRFCSELSELVQDDLTAVTDSLVYTWC
LCSYAGPKYIFWILGFISGAGAAIKNFSPAFGKLMSKEQQLEGEYRQLHSRLRVHSESIA
FYGGEFREQSYIQQKFKTLVRHLRAVHHDHWWFGMIQDFFLKYLAATFVVVLIIEPFFSG
NLRPNTSTLGRAEMFGNLRYHVSVVISLFLALGTLSISSRRINRLSGYADRIHELLLISR
ELGDDDKKTFLQRAACRNYLTEANYVEFSGVKVVTPSGNVLVKDLSLRVESGSNLLITGP
NGSGKSSLFRVLGGLWPLISGHIVKPGVGSDLNKEIFYVPQRPYTAVGTLRDQLIYPLTA
DQEVEPLTHSGMVELLKNVDLEYLLDRYPPEKEVNWGDELSLGEQQKLGMARLFYHKPKF
AILDECTSAVTTDMEERFCAKIRAMGTSCITISHRPALVAFHDVVLSLDGEGGWKVHYRR
EDSSLQSEGEIDLTELSVTDRQNDAITVQRAFTAAKKDFAFSNPQTQAYVSDLIAASPSS
SHDVKLPCVPQLHGAPRVLSLRVAAMFKVLVPTLFDKQGAQLLAVAFLVAMRTWLSDRIA
LLNGRTVKYVLQQDKAGFIRLMGTSVLQSAASAFIAPSLRHLTATLALGWRIRMTQHLLK
NYLRNNAFYQVFHLSSKKIDADQRITDDLDKLTTDLSGLVTGMVKPSVDILWFTWRMKLL
TGRRGVSILYAYMLLGLGLLRTVSPDFGKLTSQEQQLEGTFRFMHERLQTHAESIAFFGG
GAREKAMVESRFMEVLDHSSLLLKKKWLFGILDDFVTKQLPHIVTWGLSLLYALDHKGDL
SLVSTQIELGHSLRFLASVVSQSFLAFGDIMELNRKFLELSGNINRVFELKELLDAVQSV
DSRTDKFSPSNGNGLYGEDVISFSNVDIITPSEKLLARQLTCDVVPGKNLLVTGPNGSGK
SSVFRVLRGLWPIMSGRLHKPFHYLDEEDIPGCGVFYVPQRPYTCLGTLRDQIIYPLSRE
EAELRELKLYDEGKRPADTTIILDARLKTILENVRLNYLLERDEAGWDANLNWEDILSLG
EQQRLGMARLFFHKPKFGILDECTNATSIDVEEQLYRLAKDLGITVITSSQRPALIPFHA
LELRFVDGEGNWELRLIEQ
NT seq
4020 nt
NT seq
+upstream
nt +downstream
nt
atgccatctcaactgttgcagttaaccgagcatggtcggaatcttctagcctctaggagg
aacagactactgcttgcttctggtattgtcgctgctgctggtgctgtggcgtatctgcaa
tcacggtttagtagtaacaagtcttattcacatggtccttacaatggtatccgagatgat
agcgaaaattcagataaggttcttaaaaagaacaataacgtcaagagaactagacaaaag
aaaggtggattgaagtcccttaaggtgttggtaacaattcttctgtccaagatgggtaaa
gtaggcgcaagagatcttttggctttggtgggcattgtggtgttaaggacggctttgagc
aacagattagcaaaagttcagggatttctatttcgtgctgcgtttctcctacgtgtacca
tcattcttccggctaatatctgaaaacattcttttgtgctttcttctgtcaaccattcat
tctacttcaaagtacataactagtaccctaagcctgaggttcagaaaaatactgacaaca
ctcatccatgcacattactttgagaacatggcatattacaaaatatcacacgttgatgga
cgtgtgcggaatcctgagcaacagattgcaagtgacataccgagattctgttcggagttg
agcgagcttgtacaggatgatttgacagcagttactgacagtctggtttatacttggtgt
ctttgttcttatgctggcccaaaatacattttctggatattgggttttatttccggagca
ggagctgccataaaaaacttctctcctgcttttgggaaactaatgtccaaagaacagcag
ttggaaggcgaatacagacaacttcattcaaggttaagggtccattcagaaagtatagca
ttttatggtggagaatttagagaacaatcttatattcagcagaagtttaagactcttgtt
agacacttgagggccgtacatcatgaccactggtggtttggcatgattcaagatttcttt
ctgaagtatcttgctgctacgtttgtcgtcgtcttgattattgagcctttcttttccggc
aatcttagacctaacacttcaacactcggacgggcagagatgtttggcaatttaagatat
cacgtcagcgttgtgatttcactatttctggcactaggaaccctttctataagttcaaga
agaataaatcgtctcagtggttatgctgaccgcattcatgagttattgcttatatcaaga
gaactaggtgatgatgataaaaaaacattcctgcaaagagctgcatgtaggaattactta
actgaagctaactatgttgagttttctggtgtcaaggttgtcactccaagtgggaatgtt
ttagtgaaggatctctctctgagggttgaatcaggctccaatcttttaattacaggtcca
aatggcagtggaaagagttcccttttcagggttttaggtggcctttggccactgatatct
ggccatattgtgaaacctggagttggttctgatcttaataaagaaatattctatgtgccc
caaagaccatacactgctgttggaacccttcgcgatcagttaatctaccctcttacagca
gatcaggaggttgaacctcttacacatagtggaatggtggagctgttgaaaaatgttgac
cttgagtacctattggatcgttacccacctgagaaagaggttaactggggagatgaactc
tctctcggggagcaacaaaaattaggaatggctagactgttctaccataaaccgaagttt
gcaattcttgacgagtgcacgagtgccgtgacaactgatatggaggaaagattttgtgct
aaaattagagctatgggtacatcatgcataactatatcgcatcgtccagcactggttgca
tttcatgatgtggttttgtccttggatggggaagggggttggaaagttcattacagaagg
gaggactcctcattacaaagtgaaggtgagattgatttgactgaactttctgtgacagac
cgccaaaatgatgcaattactgttcaacgggcattcactgctgctaaaaaggacttcgca
ttctcaaatccacagactcaggcatatgtatcagacctgatagcagcatcaccctcttca
agtcatgatgttaagttgccttgtgttcctcaactccatggggctccaagagtactgtca
ttgagggtagctgccatgtttaaagtactggtacctaccttatttgacaagcaaggagct
caactacttgcagttgcttttcttgttgccatgagaacatggttatcagatcggattgca
ttgttaaatggacggactgtgaaatacgtcttgcagcaggataaggcgggatttatacga
ttaatgggtacaagtgtccttcaaagtgctgcatctgctttcattgctccttcattgagg
cacttgacagctacactggcccttggatggaggattagaatgactcaacatttgctaaag
aactacttaagaaataatgcattttaccaggtctttcacttgtcgagcaaaaaaattgat
gcagatcaaagaataaccgatgatcttgataagttaacgactgatttatcgggacttgtt
actggaatggtaaagccatctgttgacattttgtggttcacctggagaatgaagctgtta
acaggaagaaggggtgttagcattttgtatgcatacatgttgcttggtctgggtttgcta
aggactgttagccctgattttggtaaattgacaagtcaagaacaacaacttgagggaact
ttcaggttcatgcacgaaagactgcagactcatgccgagtctattgctttctttggagga
ggtgcccgagaaaaagctatggttgagtcaagatttatggaggttcttgatcactcttcc
ttacttttgaagaagaaatggctgttcggtattcttgacgatttcgtcacgaaacagctt
ccacatattgttacttggggtttgagtttattatatgccttggatcacaagggggaccta
tccttagtttctactcaaattgagctcggacattcactgcgattcctggcatctgtcgtg
tctcaaagctttttagccttcggtgacatcatggagttgaacaggaagttcctggagcta
tctggaaacatcaaccgagttttcgagctcaaagagctccttgatgctgttcagtctgtg
gattcaaggaccgataagttttcgccgtctaacgggaatggtctctacggtgaagatgtt
atatcttttagcaacgttgatataattacaccatcagaaaagctgttggctaggcagttg
acgtgtgatgtagtacccggaaaaaacctgctcgttaccggtccgaacggcagcggaaaa
agttctgttttcagagtacttcgaggtctatggccaattatgagtgggagacttcataaa
ccattccattatttggatgaagaggatataccaggttgtggcgttttctatgttcctcag
cgaccatatacatgcttgggaactttaagggatcaaatcatatatccactctcccgtgag
gaagcagagctgagggaactaaagttgtacgatgaaggtaaaagaccagcagacaccacg
atcattcttgatgcacgtttgaaaacgattctcgaaaatgttcgattgaattatcttttg
gagagggatgaagctggttgggacgctaacctcaattgggaagacatcctgtcgcttgga
gaacagcaaaggttaggcatggcacggttgttcttccacaagcctaaattcggtatcctc
gatgagtgcacaaatgccacgagcatcgatgttgaggaacaactttatagattggcaaaa
gatttgggtataaccgttattacctcatcacagcgtcccgctctaataccattccacgct
ttggagttacgatttgttgatggtgagggcaactgggaacttcgtttgatcgagcaatga
DBGET
integrated database retrieval system
