Hibiscus syriacus (Rose-of-Sharon): 120125565
Help
Entry
120125565 CDS
T09559
Name
(RefSeq) ABC transporter D family member 1-like
KO
K25819
ATP-binding cassette, subfamily D (ALD), peroxisomal ABC transporter [EC:
7.6.2.4
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
hsyr04146
Peroxisome
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120125565
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
120125565
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120125565
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.4 ABC-type fatty-acyl-CoA transporter
120125565
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCD (ALD) subfamily
Others
120125565
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane_2
ABC_tran
AAA_21
AAA_29
AAA_16
AAA_23
SMC_N
nSTAND1
Motif
Other DBs
NCBI-GeneID:
120125565
NCBI-ProteinID:
XP_038999899
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MPSLQLLQLTEHGQNLLDSRRKALLLASGIVVAGGTAAYLKSRFSNKTPDSYSHYNGVRE
NREKSGKVLKKNNNVKGTTRKKGGLKSLQVLAAILLSKMGQMGARDLLALVGMVVLRTAL
SNRLAKVQGFLFRAAFLRRVPSFFWLISENILLCFLLSTIHSTSKYITGTLSLRFRKILT
KLIHAHYFENMAYYKISHVDGRIRNPEQRIASDVPRFCSELGELVQDDLTAVTDGLLYTW
RLCSYASPKYIFWILAYVLGAGAAIRNFSPSFGKLMSKEQQLEGEYRQLHSRLRTHAESI
AFYGGESREESHIQQKFKTLVRHMRVVLHDHWWFGMIQDFLLKYLGATVAVVLIIEPFFA
GHLRPDTSTLGRAEMLSNLRYHTSVVISLFQALGTLSISSRRLNRLSGYADRIHELMLIS
KELSADDKKSSLQSAGSRNYLTEANYVEFSGVKVVTPTGNVLVKDLFLRVESGSNLLITG
PNGSGKSSLFRVLGGLWPLVSGHIVKPGVGSDLNKEIFYVPQRPYTAFGTLRDQLIYPLT
ADQEVEPLTCSGMVDLLKNVDLDYLLDRYPPEKEVNWGDELSLGEQQRLGMARLFYHKPK
FAILDECTSAVTTDMEERFCAKVRAMGTSCITISHRPALVAFHDVVLSLDGEGGWKVHYK
SENSSVQSEGEIDLTVSETDRQTDAIAVQRAFTAAKKDSEFSSPRTLSYVSEVIAASPSV
NHDAKLPIVPQLHKVPRVLPLRVAAMFKVLVPTVFDKQGAQLLAVAFLVVSRTWISDRIA
SLNGTTVKYVLEQNKTAFIRLIGVSVLQSGASSFIAPSLRHLKARLALGWRIRLTQNLLK
NYLRNNAFYQVFHMSSKNIDADQRITHDLEKLTTDLSGLVTGMVKPSVDILWFTWRMQLL
TGRRGVAILYAYMLLGLGFLRTVTPDFGDLTSREQQLEGTFRFMHERLRTHAESVAFFGG
GAREKAMVDSRFKELFDHSLLLLKKKWLFDILDDFVTKQLPHNVTWFLSLLYALEHKGDR
ALVTTQGELAHALRFLASVVSQSFLAFGDILELHRKFLELSGSINRIFELEELLDAAQSG
DLSTDNLLQSQRTALSAKDVISFSEVDIITPAQKLLARQLTCDVVPEKSLLVTGPNGSGK
SSVFRVLRGLWPIVSGRLYKPSHHFDEETASGGIFYVPQRPYTCLGTLRDQIIYPLSREE
AELRELKLYGQGENAVDATSILDARLKTILENVRLNYLLEREEGGWDANLNWEDILSLGE
QQRLGMARLFFHKPKFGILDECTNATSVDVEEPLYRLAKDLGITVITSSQRPALIPFHAL
ELRLVDGEGKWELWSIKQ
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atgccttctcttcaattgttgcagctaactgagcatggccaaaatcttttggattctagg
aggaaagctctacttcttgcttctggtattgtggttgccggtggaactgctgcttatctg
aaatcaaggtttagcaacaaaacacctgattcatatagtcattacaatggggtccgagaa
aacagagaaaaatcaggtaaggttcttaaaaagaacaacaatgtaaagggaactacacga
aagaaaggcggattgaagtcactccaggttttagcagcaattcttctatcaaagatgggc
caaatgggtgcaagagatcttttggcgttggtgggcatggtggtgttgagaactgctttg
agcaatagattagcaaaagttcagggatttctattccgtgctgcttttcttcgtcgtgta
ccatcatttttctggctaatatccgaaaatattttattgtgctttcttctgtcgaccatt
cattcaacttcaaaatacataacgggtaccctaagtctgaggttcagaaaaatactgacg
aaactcatccatgcacattactttgagaacatggcgtattacaaaatatcgcatgttgat
ggacggattagaaatcctgaacaacggattgcaagtgatgttccaagattctgttcagag
ttgggtgagcttgtacaggatgatctgacagcagttactgatggtctgctttatacttgg
cgtctttgctcttatgctagcccaaaatacatattctggattttggcctatgttttggga
gctggagctgcaataagaaacttctctccttcctttgggaagctaatgtccaaggaacaa
cagttggaaggagaatacagacaacttcattcaaggttaaggacccatgcagagagtata
gcattttatggtggagaaagtagagaagaatctcatattcaacagaagtttaagactctt
gttaggcacatgagggttgtacttcatgaccattggtggtttggcatgattcaggacttc
ttattgaagtaccttggtgctactgtggctgttgttctgattattgagcctttttttgct
ggccatcttagaccagatacttcaacattgggacgggcggagatgttgagcaatttaaga
tatcacaccagtgttgtaatttcactatttcaggccctgggaaccctttctataagttca
agacggctaaatcgtctcagtggttatgctgatcgtattcacgagttaatgctcatatca
aaagagttaagcgctgatgataaaaagtcatccctgcaaagtgccggaagtaggaattac
ttaactgaagctaattatgttgagttttctggcgtcaaggttgtcactccaaccggaaat
gttttggtgaaagatctctttctaagggttgaatcgggatctaatctattgattacaggt
ccaaatggcagtggaaagagttccctttttcgtgttttaggtggtctttggccactggta
tctggccatattgtgaaacctggggttggttctgatcttaataaggaaatcttctatgtg
ccacaaagaccatacacagcttttggaacccttcgagaccagctaatttatcctcttacc
gcagatcaggaggttgaacctcttacatgtagtggaatggtggacctgttgaaaaatgtt
gaccttgattacctgttagatcgttatccacctgagaaagaggtgaattggggtgatgaa
ctcagtcttggggagcaacagagattggggatggctagactcttctaccataagcctaaa
tttgcaattcttgatgagtgcactagtgctgtgacaactgatatggaggagcgattttgt
gctaaggttagagcaatgggtacatcatgcataaccatatcacatcgtccagcactagtt
gcatttcatgatgttgttttgtccttggatggggaaggaggatggaaagttcattacaaa
agtgagaattcttcagtacaaagtgaaggcgagattgatttgacagtttctgagacagat
cgccaaactgatgcgattgcagttcaacgggcattcaccgctgctaaaaaggactctgaa
ttctcaagcccaaggactctatcatatgtgtcagaggtaatagcagcatcgccctctgtg
aatcatgatgctaaattgcctattgttcctcaactccacaaggttccaagagtactgcca
ttgagagtagctgccatgtttaaagtattggtacctacggtatttgacaaacaaggggct
caactacttgcagttgcttttctcgttgtctcgagaacatggatatcagatcggattgca
tcattgaatggaaccactgtgaagtatgttttggagcagaataagactgcctttatccgt
ttaattggtgtaagtgttcttcaaagtggcgcatcttctttcattgcaccctccttaagg
cacttgaaagctaggttggcccttggatggaggattaggttgacccaaaatttgcttaag
aactacttacgaaataatgcattttaccaggtttttcatatgtcaagcaaaaatattgat
gcagatcaaagaataactcatgatcttgagaagttaacaactgatttgtctggactggtt
actggaatggtgaagccatctgttgacattttatggttcacctggagaatgcagctatta
actgggagaaggggtgttgccattttgtatgcatatatgttactcggtctgggttttcta
aggactgttactcctgattttggtgatttgacaagtcgagaacaacaacttgagggaact
tttaggttcatgcatgaaagactgcgcacgcatgctgaatctgttgctttctttggaggc
ggtgctcgggaaaaagcaatggtcgactcaagatttaaggagctttttgatcactctttg
cttcttttgaagaagaaatggctgtttgatatacttgatgattttgtcacaaaacagctt
ccacataatgttacttggtttttgagcttattatatgccttagagcacaagggggaccga
gccttggttactactcaaggtgagctggcacatgcattgaggttcctggcatctgttgta
tctcaaagctttttagcttttggtgacatcctagaactgcatagaaagtttctggagcta
tcggggagtatcaaccggatttttgagcttgaagagcttcttgatgctgctcaatctggg
gatttgagcaccgataatttgttgcagtctcagaggactgctctctctgctaaagatgtt
atttctttttccgaggtggatataattacgccggcacagaagctgttggctaggcagttg
acatgtgatgtagtcccagagaaaagcctgctagttactggtccaaacgggagtggcaaa
agttctgttttcagagtacttcgaggtctgtggcccattgtgagtggaaggctttataaa
ccatcgcaccattttgatgaagagactgcatctggtggcatcttctatgttcctcagcga
ccgtatacgtgcttgggaactttaagggatcaaatcatatatcctctctctcgcgaggaa
gcagagttgagagaattaaaattgtacggacaaggtgaaaacgcagtggatgccaccagc
attcttgatgcgcgtttgaagaccattcttgaaaatgttcgattgaattatcttttggaa
cgggaggaaggtggttgggatgctaatctcaattgggaagacatcctctcactcggagaa
cagcagagattaggcatggcacggttgttcttccacaagcctaaatttggtatcctcgat
gagtgcacaaatgccacgagtgtcgatgttgaggaaccactttatagactggcaaaagat
ttgggtattaccgttattacatcatcacagcggcctgctctaataccgttccatgctttg
gagttacgacttgttgatggcgagggtaagtgggaactttggtcaatcaaacaatga
DBGET
integrated database retrieval system
