Hibiscus syriacus (Rose-of-Sharon): 120129480
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Entry
120129480 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit 2-like
KO
K03002
DNA-directed RNA polymerase I subunit RPA2 [EC:
2.7.7.6
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
120129480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120129480
Enzymes [BR:
hsyr01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
120129480
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
120129480
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_1
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpa2_4
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
120129480
NCBI-ProteinID:
XP_039002895
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
METQGILDRGMPSSKELEELKELFKHHIESFDYMIDLGLETMLKRIKPVQIFDPVSTKTV
RIWYDHPEVFPPQKERSSKTSAGALLPFECRQAKISYTGNLHMDVCFQWNGGVVXREKIN
FGEFPIMLRSKRCYLRDADPSKMVACKEESAEMGGYFVLNGLERVVRTVILPKRNYPMSL
VRGSYRDRREGYTDKAVVIRCVRDDLSSVTVKLYYLHNGSARLGFWIQGREYMLPVALFL
RCLIDTNDHEIYTKLTCCYTEKDGELKGAVGTQLVGERAKIILDEVRDLALFTKEQCLQH
IGEHFQPVMEEMETESHSSIADAVLRNYILXSLEXHNDKFNLLIFMVQKLFSLIDQTSAP
DNSDSLQNQEILLPGHLITIYLKEKLEDWLRKGXKLIEDVINNKSKNFDFCNLKDVKKVM
EKISPKQIGAAIENLLKTGRLVTQTGLDLQQRAGFTVQAERLNYLRFISFFRSVHRGASF
AGLRTTSVRKLLPESWGFLCPVHTPDGEPCGLLNHMTCTCRITSYYNSQGIIRDFFKIRM
SILNVLVGVGMTTSWPKVDHDGPPQALPVLLDGVIGSLSTSEADKVVAHLRNLKVSDSSV
IPDDLEVGYVPLSLGGTYPGLYLFTSPSRFIRPVRNISIPSSDEKDIELIGPFEQVFMEI
KCPDGGDGGRSTTFPATHEELLPTAMLSVVANLTPWSDHNQSPRNMYQCQMAKQTMAFSL
QALHSRADQKLYHLQTPQTPIVRTKTYTKYCLDNYPSGTNAIVAVLAYTGYDMEDAMILN
KSSVERGMCHGQIYQTETIDLCEGKSKSDRGQRIFKREHSDKAISSFVDSDGLPYIGQVI
HGGEPYCSTINQVTNAKRTYSRKGSEMAIVDYVSVDTKNKNHLQKVNIRFRHPRNPVIGD
KFSSRHGQKGVCSQLWPDIDMPFSGVTGMRPDLIINPHAFPSRMTIAMLLESVAAKGGSL
HGKFVDATPFSDSVKGADGKTQESESLVDELGSMLRARGFNYHGVEVLYSGVYGTELTCE
IFIGPVYYQRLRHMVSDKYQVRATGQVDQITRQPIKGRKRGGGIRFGEMERDSMLAHGAA
YLLHDRLHTCSDYHIADVCSLCGSILTTAIVQPQKRAVREIGGLPPARAPKKVMCHACQT
SKGMETVAMPYVFRYLAAELAAMNIKMTLQLSSGAGA
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atggaaacgcaggggatactagaccgaggcatgcccagcagtaaagagctagaagagcta
aaggagctattcaaacaccatatcgagtctttcgattacatgatcgatttaggcttagaa
actatgcttaaacgcatcaagcctgtgcaaatcttcgatcccgtctccaccaaaactgtt
agaatctggtatgatcatcccgaagtatttccaccgcaaaaggaacggtcttcaaagacg
tcagcaggggcgttgcttccatttgaatgtagacaagcaaaaatttcttatacggggaac
ttgcacatggatgtttgctttcagtggaatggtggagttgttnatagagaaaaaattaat
tttggcgagtttcctataatgttaaggtcgaaacgttgttacttgcgagatgctgatccc
tcgaaaatggttgcttgcaaagaagagtcagcagaaatgggtggttactttgttctgaat
gggcttgagagagttgtcaggaccgtgatattgccgaaacggaattatcctatgagcttg
gtacggggttcatatcgtgatcgtcgggagggttatactgataaagcggttgtaataagg
tgtgtgagagatgatctgtcttcagtaacagttaagttgtattatcttcataatgggagt
gcaagacttggattttggatacaggggagggaatacatgcttcctgtggcattgttctta
aggtgcttgattgacactaatgatcacgaaatttatacaaaattgacttgctgctatact
gagaaagatggcgagttaaagggtgctgttggcactcaacttgttggtgaaagagccaag
attattcttgatgaagttcgggacttagcgctttttaccaaggagcaatgtctacaacat
attggggaacacttccaacctgttatggaggaaatggaaactgagagtcattcttctatt
gctgatgcagtgctgaggaattacatattgnnttcacttgaatgacacaatgacaagttt
aatctgcttatctttatggtgcagaaacttttctcgcttatagatcaaacttctgcgcct
gataactcggattctctgcaaaatcaggaaattttactccctggtcatctcattaccatt
taccttaaggagaaactggaagattggttgcgcaaagggnaaaaacttattgaagatgtg
atcaataacaaaagcaaaaattttgatttctgcaacttaaaagatgtcaagaaggtgatg
gaaaaaatttctccaaagcaaattggtgctgcaattgagaatttgttgaaaactggaaga
ttggtaacccaaacaggtttagatttacagcagagggcgggtttcacggttcaggctgag
aggcttaactacctacgattcatttcattttttcggtctgttcatcgtggtgcttcattt
gctggactccgtacgaccagcgttcggaagttgctacctgaatcttggggatttctttgc
ccggtgcacactcctgatggagagccttgtgggctgctgaaccacatgacatgtacttgc
cgaattacatcgtactacaactcgcagggaattattagagattttttcaaaataagaatg
tctattcttaatgttctagttggggttggaatgacaacctcatggcccaaagttgatcat
gatgggcctcctcaagctcttcctgttcttttagatggtgttattggttctttatcaacc
agtgaagctgacaaagttgttgctcatttgcggaatttgaaagtgtcggattcttctgtg
attccggatgacttggaagtgggatatgttcctttgagcttgggtggtacgtatcctggt
ttgtacctgttcacttctccatctaggtttattcggccagtcagaaatatttctatccct
tcttcggatgagaaggatattgaacttattgggccattcgaacaggttttcatggaaata
aaatgtccagatggtggggatggaggaagaagtactacttttcctgcaactcatgaagaa
cttttgccaactgcaatgcttagtgtggttgctaatcttacaccttggtcagatcataat
caaagtccacgtaacatgtaccagtgccagatggcaaaacaaacaatggctttttcttta
caagcactccattcacgtgcagatcaaaagctgtatcatcttcagactcctcaaactcca
attgtgcgcacaaaaacatatacaaaatactgcctggataattatccttcaggaacaaat
gcaatagtagcagtgcttgcgtatacaggatacgacatggaggatgccatgattttaaac
aagtcatctgtggaacgtgggatgtgtcatggacaaatataccaaacagaaactatcgac
ttgtgtgagggtaagagcaagtcagatagaggacaaagaatttttaaaagagaacattca
gataaagcaatatcttcttttgttgattcagatgggcttccatatattggtcaggtgata
catggaggtgaaccttactgtagtacaattaatcaggtgacaaatgcaaagagaacctac
agccgtaagggttcagaaatggctattgttgactatgtctcagttgatacgaaaaataag
aatcatcttcagaaggttaatattcgttttcgacatccaagaaaccccgtcattggtgat
aaatttagtagcagacatgggcagaaaggtgtttgctctcagttgtggccagatattgat
atgccgttctctggagttacgggaatgcgtcctgatcttataatcaatcctcatgctttt
ccatctagaatgacaattgcaatgcttctggaatctgttgctgctaagggaggaagctta
catgggaaatttgtggatgctacaccattttctgattcagtcaagggagctgatgggaag
acacaggagtctgagtctcttgttgatgaacttggttccatgctaagagctcgtgggttt
aattatcatggagttgaggtgttatacagcggggtttacggaacagaactaacatgcgag
atttttattggccccgtttattatcagcgtcttagacacatggtttccgataagtatcag
gttcgagccaccggacaagttgatcagattactagacagccgattaaaggaagaaagcgt
ggtggaggtatacgttttggagagatggaaagagactctatgcttgctcatggggctgca
tatttattacatgataggctccatacatgttctgattatcacattgctgatgtctgctcc
ctgtgcggaagcatccttaccaccgcgattgtccagccacagaagcgggctgttagggag
ataggtgggttgcctccggccagggctcctaagaaggtaatgtgtcatgcttgccagaca
agcaaagggatggagactgttgcaatgccttatgtttttagatatctggcagctgagttg
gcagctatgaacataaaaatgacactacaactcagtagcggagctggagcttga
DBGET
integrated database retrieval system
