Hibiscus syriacus (Rose-of-Sharon): 120146063
Help
Entry
120146063 CDS
T09559
Name
(RefSeq) exopolygalacturonase clone GBGE184-like
KO
K01213
galacturan 1,4-alpha-galacturonidase [EC:
3.2.1.67
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr00040
Pentose and glucuronate interconversions
hsyr01100
Metabolic pathways
Module
hsyr_M00081
Pectin degradation
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00040 Pentose and glucuronate interconversions
120146063
Enzymes [BR:
hsyr01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.67 galacturonan 1,4-alpha-galacturonidase
120146063
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Glyco_hydro_28
Pectate_lyase_3
Beta_helix
Motif
Other DBs
NCBI-GeneID:
120146063
NCBI-ProteinID:
XP_039015664
LinkDB
All DBs
Position
Unknown
AA seq
315 aa
AA seq
DB search
MASMGLRGIMGTLVLGFGLLDFQLSAIFYTDHAMEQAKGIATGNAGPGVKAFNVLDYGAK
ANGNSPSSINFIRAFKAACNHQGRAMLVIPRGEYVVGLILFSRPCSCEAPLMVQVSGNVL
PQSNTKTAEGAEWITFQSIDGLIVSGKGTFNGLGEKSWRPKCKGCGRMPASLKFINGIQS
VNAKGFHMMISICNNLWIDDVNITAPAESPNTDGIHMSKTNMLKITNSRIGTGDDCVSII
HGSTNITVENVDCGPGHGISIGILGHYDSEGDVFGITVSNCSFADTDHGARIKTYKSDSP
SRASGIIYENLVMKI
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atggcatcaatggggctacgggggataatgggcactcttgttctaggctttggtcttctt
gattttcaattatcggccatcttctatactgatcatgccatggaacaagctaaagggatt
gccaccggtaatgccggccccggtgttaaagctttcaatgtcttggactatggtgccaag
gctaatggaaactcccctagctccattaattttattagggcattcaaagcagcgtgcaat
catcaaggaagggcaatgctggtgatccctagaggagaatacgtagtaggattgatattg
ttttccagaccttgcagctgtgaagctccgctgatggttcaagtcagtggaaatgttctt
ccacaaagtaatacgaagacagccgaaggtgcagaatggatcacattccagagcattgat
gggttgattgtaagtgggaagggtactttcaatggcctaggtgaaaagtcatggaggccc
aaatgcaaaggatgcggtcgaatgcctgcaagtttgaagttcatcaatggtattcaatcc
gttaacgctaaagggttccatatgatgatcagtatttgcaacaacctctggattgatgat
gttaatataacagctcctgctgaaagccccaacactgatggcattcacatgagcaaaacc
aacatgctgaaaataacaaacagtcgcatcggcacaggtgacgattgcgtctccatcatc
catggatccaccaacatcactgtcgagaacgtcgattgtggccctggacacggtatcagt
attggtatccttggacactacgattccgaaggagatgttttcgggatcacggtgagtaac
tgctcgtttgcagacacagaccatggtgcaagaatcaaaacttacaaatccgatagtcca
agcagagcttcaggcattatctacgaaaatctggtaatgaaaatataa
DBGET
integrated database retrieval system
