KEGG   Hibiscus syriacus (Rose-of-Sharon): 120165777
Entry
120165777         CDS       T09559                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7-like
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
hsyr  Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03020  RNA polymerase
hsyr03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:hsyr00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    120165777
  09124 Replication and repair
   03420 Nucleotide excision repair
    120165777
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsyr03021]
    120165777
   03019 Messenger RNA biogenesis [BR:hsyr03019]
    120165777
   03400 DNA repair and recombination proteins [BR:hsyr03400]
    120165777
Transcription machinery [BR:hsyr03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     120165777
Messenger RNA biogenesis [BR:hsyr03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     120165777
DNA repair and recombination proteins [BR:hsyr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      120165777
SSDB
Motif
Pfam: SHS2_Rpb7-N S1 Vg_Tdu
Other DBs
NCBI-GeneID: 120165777
NCBI-ProteinID: XP_039031152
LinkDB
Position
Unknown
AA seq 176 aa
MFFPIVLERNMQLHPRHFVRNLRENLVSKLMKDVEGTCSGRHGFVVAITGIENVGKGLIQ
DGTGFVTFPVKYQCVVFRPFKGEISEAAVSMVNKMGFSAEAGPVQIFVSNHFILDDMEFQ
SGDIPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKDDFLGVINDPTTA
NT seq 531 nt   +upstreamnt  +downstreamnt
atgttttttcccatagttttggagaggaacatgcagctgcacccacgccacttcgttcgt
aacctacgagaaaacctcgtttccaaactcatgaaagatgtcgagggcacttgcagtgga
agacatggatttgtggttgcaataacgggtatagaaaacgtcggtaaaggtttgattcaa
gacgggacaggatttgtgacattccctgtcaaatatcaatgtgttgtgttcagaccattt
aaaggggagatctcggaagccgctgtttcgatggtgaacaagatgggattttctgcagaa
gccggcccggtccaaattttcgtttctaaccattttatcctagatgatatggagtttcag
tctggagatataccgaattatactacctctgatggatcggttaagattcaaaaggacagt
gaagttcgcttgaagataattggaactcgagtagatgctaccgaaatattctgtattgga
accataaaggacgatttcttgggtgtgattaatgatcccaccacagcttaa

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