Hibiscus syriacus (Rose-of-Sharon): 120169788
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Entry
120169788 CDS
T09559
Name
(RefSeq) transcription initiation factor TFIID subunit 1-like
KO
K03125
transcription initiation factor TFIID subunit 1 [EC:
2.3.1.48
2.7.11.1
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
120169788
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
hsyr01001
]
120169788
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hsyr03021
]
120169788
03036 Chromosome and associated proteins [BR:
hsyr03036
]
120169788
Enzymes [BR:
hsyr01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.48 histone acetyltransferase
120169788
2.7 Transferring phosphorus-containing groups
2.7.11 Protein-serine/threonine kinases
2.7.11.1 non-specific serine/threonine protein kinase
120169788
Protein kinases [BR:
hsyr01001
]
Serine/threonine kinases: Other
TAF1 family
120169788
Transcription machinery [BR:
hsyr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
120169788
Chromosome and associated proteins [BR:
hsyr03036
]
Eukaryotic type
Histone modification proteins
HATs (histone acetyltransferases)
120169788
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF3591
Bromodomain
zf-CCHC_6
HTH_3
DUF1547
Motif
Other DBs
NCBI-GeneID:
120169788
NCBI-ProteinID:
XP_039033833
LinkDB
All DBs
Position
Unknown
AA seq
1167 aa
AA seq
DB search
MSRYSPTEVIDKDLPNLTGNYLPFQQHSSLLRYCEERPLLLNNVGMGANLCTYYQKTSSG
DQTTSGMFRNGNQTLGNVLLLEPADKSPFIGDIKAGYSQSSLETNMYKAPIFSHKVPSTD
FLLVRSPKGKLSIRRIDKIAVVGQQEPLMEVFAPGSKNILTYLMNRMLVYVYREFSAAAK
GGLIPFIGTDELFTHFPKLSDAIVRKKLKECAYLRRDKSGRQTWSMKPDLHIPPEGVLRK
LVSPEHVCAYESMQAGLYRLKHLGITRLTTLNSVSSAMSQLPDEAIALASASHIERELQI
TPWNLSCNFVACTNQDRDNIERLEITGVGDPSGRGLGFSYVRTAPKAPVSNAVMKKKTAA
ARGGSSVTGTDADLRRLSMEAAREVLLKFNVPDEVIAKQTRWHRIAMIRKLSSEQAASGV
KVDPTTISKYARGQRMSFLQLQQQTREKCQEIWDRQIQSLSAVDGEENESDSEANSDLDS
FAGDLENLLDAEEFEEGEEGDNDNKVDKADAVKGLKMRRRPYKAQAEEEIEDEAAEAAEL
CRLLMDDEDDQKKKKKKKNKAVAEDTGLTFGLQPRMGVESLGVKKASITPKQIVRATQPS
GSYTTNENFVKDSKDIESKSFKGSLSGKLKGMKKNGMPSTGPLTKVKILGDNVKLFKEKK
SSRDTFVCGACGQLGHMRTNKNCPKYGEDPEMQVEATDMEKTPGKSTSLEPSGQSQLKMM
KKKLKTKSATKIAVVEASEGEKFSSNAKALPLKFKCSTDKTSDKIASGGTQSSDNLVSSD
PENGTKSAAKVNKIIISNRVKPDEMQVESQKLPIVIRHRVDTNRGQAESHKKSIVIKPPE
NMERDQVEPHKPSVVIRPPADKDKEQPHKKIIIKRPKEIIDMDQLSQEGGTYPEYRKTKK
IVELSSFEKHGKQESLRLMEPKAKRKAKEERRLWEEEEKRRNVERIREDKARKLYEEEMR
LLEERGRFAEITRYTEDIRREREEEERQKAKKKKKKKAEIKDDYLEDYRTRRNDRRAVER
DRGAKRKPVELGRYSAECVPPTKRRRGGEVGLANILEQIVETLRENTEVSFLFLKPVSKK
EAPDYLNIVKHPMDLSTIRDKVRRMEYKDREDFRHDVWQIAYNAHIYNDGRNPGIPPLAD
QLLELCDYLMHEYAHSLDEAEAGIGEA
NT seq
3504 nt
NT seq
+upstream
nt +downstream
nt
atgtcgagatactctcctactgaggttatcgacaaagaccttccaaacctcaccggaaat
tatcttccctttcaacaacatagttccttgttgaggtactgtgaggagaggcctttactg
ttgaacaatgtgggcatgggtgcgaatctgtgcacctactatcagaaaacatcttcaggt
gatcaaactactagtgggatgtttcgcaatggaaaccaaaccttgggaaatgttctgctt
ctagagccagctgacaaatcaccttttattggagatattaaagccggctatagccagtca
tctctagaaacaaacatgtacaaggctcctatattttcccacaaagtgccatcaactgac
ttcttattggttaggtcaccaaagggaaagctttctatacgacgtatcgataagattgct
gttgtaggacaacaggagcctctcatggaggtatttgctcctgggtcaaagaatattctg
acatatctcatgaacagaatgctggtttatgtatatcgggagttctctgcggctgccaaa
ggtggtttgattccattcattggtacagatgagttgtttactcattttcctaagctttca
gatgcaattgtccgtaaaaagctgaaggaatgtgcttatttgcggagagataaaagtgga
cgacagacttggtccatgaagcctgatttacacattccacctgaaggtgttttgagaaag
ttggtgtctccagagcacgtgtgtgcctatgaaagcatgcaagctggtctgtaccggctt
aaacatttaggaatcacacgactaacaactcttaacagtgtttcatctgcaatgagtcaa
ctccctgatgaagctatagctctggcttccgcatcacacattgaacgggagctgcagata
actccatggaatctgagttgcaattttgttgcatgtacaaaccaagacagagataatatt
gagcgcctggaaataactggtgttggcgatccttctggtcgaggtttaggatttagctat
gtccgtaccgctccaaaggctcctgtgtcaaatgctgtgatgaagaagaaaactgcagct
gctcgtggaggttctagtgtgactggtacagatgctgacctccgcagattaagcatggag
gctgcacgggaggttcttttgaagttcaatgttcctgatgaagtgattgcaaaacaaact
aggtggcaccgtattgctatgatacgcaagctttcaagtgaacaagctgcatcaggagtc
aaggttgatccaacaactataagcaagtatgcacggggacagcggatgtcctttcttcag
ttacaacagcaaaccagagaaaaatgtcaggaaatatgggatcgacaaattcagtctctt
tcagctgttgatggtgaagaaaatgaaagtgattccgaggcaaatagtgatcttgattcc
tttgccggcgatctagaaaatttgcttgatgcagaggaatttgaagaaggggaagaaggt
gataatgataacaaggttgacaaagcagatgctgttaagggtctcaagatgagaagacga
ccatataaggctcaagcagaagaagaaattgaagatgaagctgcggaggctgctgagtta
tgtcgtttactcatggatgatgaggatgaccaaaagaagaaaaaaaagaagaaaaataaa
gctgttgcagaggatactgggttgacttttggcttacaaccacgtatgggtgttgagagt
ttaggtgtaaagaaagcaagcataactcccaagcagattgttcgtgctactcaacctagt
gggtcatatactacaaatgagaattttgttaaggattcaaaggatattgaaagtaaaagt
tttaaaggaagcctgtctggaaagttgaaaggaatgaaaaagaatggtatgcccagcaca
ggaccattaactaaagtcaaaatattgggagacaatgtcaagttgttcaaggagaagaaa
tcatcaagagatacttttgtctgcggagcttgtggtcagcttggacacatgaggaccaac
aagaactgccccaagtatggagaagatccagaaatgcaggttgaagctactgatatggaa
aaaactccaggcaaatcaacttcgctggaaccctcgggtcagtcccagttgaagatgatg
aaaaagaagctcaaaacaaaaagtgcaacaaagatagcagttgtagaagcttcagagggt
gaaaaattcagttcaaatgcaaaagctcttccattgaagttcaaatgctctactgataaa
acatctgataaaattgcttctggaggcacacaaagttctgacaatctagtctcttctgac
ccagaaaatggaaccaaatctgctgcaaaggttaataaaataattatttctaacagggtt
aaacctgatgaaatgcaggttgagtctcagaagctgcccattgttatacggcatcgagtg
gataccaaccgaggccaagctgaatctcataagaaatctattgttataaagccaccagaa
aatatggagagggaccaagttgaacctcataaaccttctgttgtcattcgcccaccagct
gataaagataaagaacaacctcacaaaaaaattataatcaagcgaccaaaggaaattatt
gatatggatcaacttagtcaagaggggggcacttatcccgagtacagaaaaacaaaaaaa
atagtggaattatcgagctttgagaagcatgggaagcaggaaagcttgcgattaatggaa
ccaaaagcaaagcggaaagctaaagaggagagaagattgtgggaagaggaagagaagagg
agaaatgtagagagaataagagaagacaaagcaaggaagctttatgaggaagaaatgaga
ctgctggaagagcgaggaagatttgctgagatcacaagatacacagaggacattcgaaga
gagagggaggaagaggaacgccaaaaagctaagaagaaaaagaagaaaaaggctgaaata
aaagatgattatttagaagactacaggacaagaagaaatgacagaagagcggtggaaaga
gatcgaggagcaaaaagaaaacctgttgagttaggacgatattctgcagagtgtgttcct
ccaacaaagcgacgcagagggggagaggttggtctggccaacatcttagagcagattgta
gaaacacttagagagaataccgaggtgtcctttctgttcttaaaaccagtatccaagaag
gaggcccctgactacctgaacattgtaaagcacccaatggatttgtccacaataagggac
aaggttaggaggatggaatacaaggatcgagaagactttagacatgatgtgtggcagatt
gcctacaatgctcatatctacaatgacggtcgtaatcctggtattcctcctcttgctgat
cagcttttggagctttgtgactacttgatgcatgagtatgctcatagtttggatgaagct
gaagcaggtataggggaagcttaa
DBGET
integrated database retrieval system
