Hibiscus syriacus (Rose-of-Sharon): 120206000
Help
Entry
120206000 CDS
T09559
Name
(RefSeq) LOW QUALITY PROTEIN: ABC transporter B family member 9-like
KO
K05658
ATP-binding cassette, subfamily B (MDR/TAP), member 1 [EC:
7.6.2.2
]
Organism
hsyr
Hibiscus syriacus (Rose-of-Sharon)
Pathway
hsyr02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
hsyr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
120206000
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
hsyr02000
]
120206000
04147 Exosome [BR:
hsyr04147
]
120206000
04090 CD molecules [BR:
hsyr04090
]
120206000
Enzymes [BR:
hsyr01000
]
7. Translocases
7.6 Catalysing the translocation of other compounds
7.6.2 Linked to the hydrolysis of a nucleoside triphosphate
7.6.2.2 ABC-type xenobiotic transporter
120206000
Transporters [BR:
hsyr02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB1, 4, 5 subgroups
120206000
Exosome [BR:
hsyr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
120206000
CD molecules [BR:
hsyr04090
]
Proteins
120206000
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
ABC_ATPase
Zeta_toxin
AAA_22
AAA_29
AAA_16
AAA_21
RsgA_GTPase
AAA_15
AAA_30
AAA_7
DUF5906
SbcC_Walker_B
ATP-synt_ab
Motif
Other DBs
NCBI-GeneID:
120206000
NCBI-ProteinID:
XP_039061679
LinkDB
All DBs
Position
Unknown
AA seq
1291 aa
AA seq
DB search
MVEVNNDDGSSSVVRSDGAASEGKAKSKNNGGNKKSADQQKVPFYKLFAFADRLDVFLIT
AGTIAAMANGMTQPLMTLIFGEMIDNFSRADRSHVVKIVSEVAVKFIYLGIYSCITSFTQ
VTCWMVTAERQATRIRALYLKTILRQDIGFFDTETTTGEVVGRMSGDTILIQEAMGEKVG
KFIQLLTTFIGGFIVAFIKGWQLALVLTSCIPLVVLAGGTMAMIMAKMSSRGQIAYAEAG
NVVEQTVGAIRTVASFTGEKHAIEKYNDKLRIAYSATVRQGLVSGMGLGTMMLVVFSTYG
LAVWVGAKLIANHGYNGGQVISVILAIMTGGMSLGQTIPSVNAFASGQAAAYKMFETIKR
KPMIDPYDTSGITLEDIRGEIELKDVYFRYPARPDVQIFAGFSLHVPSGTTAALVGQSGS
GKSTVISLLERFYDPESGEVLIDGVDLKKIQLQWIRGKIGLVSQEPILFATTIRENIAYG
KDNATHEEIKEAIDMANAAKFIDKLPKGLDTMVGEHGTQLSGGQKQRIAIARAILKNPRI
LLLDEATSALDAESERIVQDALVRVMSNRTTMVVAHRLTTIRNADMIAVVHLGKLVEKGT
HEELIKDPEGAYSRLVRLQEGDKEAGAQGKETEKSDETADTDKEITLSGSQRLSTSLVRS
TSRSASSSSRQSFTYTFGVPGLVNFAETEETGEERSILDEAKVERRKKVSIRRLASLNKP
EVPVLLIGSIAAAVHGLVFPIFGLLFSSAIKSFYDPXSKLLKNSRAWALSYVGLGVVTLI
IGPAQNFFFGIAGGKLIERIRSMMFEKVVHQNIGWFDDPANSSGAIGARLSTDASTVRNL
VGDSLALIVQNLATIIAGLVIAFTANWILAIAILAAMPFTLIQGYLQTKFLKGFSADAKL
KYEEASQVANGAVGGIRTVASFCSEQRVMDLYQQKCEAPMKQGVRLGLVSGTGFGFSFFA
LYCTNAFCFYLGAILVKHGKAKFDEVFKVFFALTISAIGVSQTSALAPDTNKAKDSAASI
FDILDRKPPIDSSSEDGLTIPTVTGNIELEHVSFKYPTRPDIQIFKDLCLTIPNGKTVAL
VGESGSGKSTVISLILRFYDPNSGSVXLDGTDIRKLRLSWLRQQMGLVSQEPILFKETIR
TNIAYGKQGNATEEEIVAATKAANAHTFISSLPQGYETSVGERGVQLSGGQKQRIAIARA
ILKNPRILLLDEATSALDAESERVVQEALDAVMVNQTTVVVAHRLSTIKGADIIAVVKNG
AIVEKGGHDALMNITDGAYASLVALHLNTST
NT seq
3876 nt
NT seq
+upstream
nt +downstream
nt
atggtggaagttaataatgacgacggatcatcatcagtagtgagaagtgacggagcagct
tccgaaggaaaagctaaaagcaaaaacaatggcggcaacaagaaatctgccgatcaacag
aaagtgccattttacaagctgtttgcgttcgctgataggttggatgtgtttttgataacg
gcgggaaccatcgcagccatggccaatgggatgacgcagccactcatgactctcatattc
ggcgaaatgatcgataacttctcccgcgccgatcgatcccatgtcgttaaaatagtctcg
gaggttgcagtgaagtttatatacttggggatttattcgtgcattacttcattcacacag
gtaacatgttggatggtgacagcagagagacaggctacccgcatccgtgccttgtactta
aaaaccatactccgacaggacatcggattcttcgacactgaaacgacaaccggtgaagtt
gtcgggaggatgtcgggggatactatactcattcaagaggcaatgggagagaaggttggg
aagtttatacagcttctaacaactttcattggggggtttatagtagcttttataaaagga
tggcaactagcactagttctcacatcctgcatccctcttgtcgtccttgccggtggaacc
atggcgatgataatggcgaaaatgtcaagcagaggacaaattgcttatgctgaagccggg
aacgttgtggaacaaacagttggagccattagaactgtcgcatcgtttaccggcgagaaa
cacgccatagagaaatataatgacaagctgcggatcgcctatagtgccactgttcgacaa
gggctggtttcaggcatgggacttggcacaatgatgcttgtagtgttctccacttatgga
ctcgctgtatgggttggagctaaattgattgcaaaccacgggtacaatggtgggcaagtc
atcagtgttatattagcaatcatgacaggaggaatgtcgttgggtcagacaattccgagt
gtaaatgcgtttgcatcggggcaagctgcagcgtataagatgttcgagacgattaaacgg
aaaccgatgattgatccttatgacactagtggaataacactggaagatatccggggtgaa
atcgaactcaaggatgtgtattttaggtatcctgcaaggcccgatgtgcagatatttgct
ggtttttcattgcatgttccaagtggtacaactgcagccttggtgggacagagtggtagt
ggcaaatcaaccgtaattagccttttggagagattttatgatcctgaatccggagaagtt
cttattgatggcgttgatcttaaaaagatacagctacaatggattagggggaaaatcgga
cttgtcagccaagaaccgatactgtttgcaacaactatcagggaaaatattgcatatgga
aaggacaacgcgactcatgaagagattaaagaagcaattgatatggctaatgctgccaaa
ttcattgacaagttgcccaaggggcttgacaccatggtgggagagcatggaactcaactt
tcaggtgggcaaaagcaaagaatagcaatagcaagagccattttgaaaaacccaagaatc
ctcctcctcgacgaggctacgagtgccctggatgccgaatcggaacgaatcgttcaagat
gcactggtgagagtgatgtccaataggacaaccatggtggtggcacatcggttgacaact
atcaggaatgcagacatgatagcagtggtgcacttagggaaacttgtggagaaaggaacg
catgaggagttgatcaaagatccggaaggtgcttattcccgattagttcgtttgcaagag
ggagataaagaagcaggtgctcaagggaaggaaaccgaaaaatcagatgaaactgctgat
acagataaggaaattaccctgtctggaagccagagattgagtacgtctttggtaaggtct
acaagcagaagtgcatcatcatcaagtcgacaatccttcacatatactttcggtgttccc
ggtctagttaactttgctgaaacagaagaaacaggcgaagagagaagcatactggatgaa
gctaaagttgaaagacgcaaaaaagtttcgattagacggctggcgagtcttaacaagcct
gaggttccagtcctattgattggctccattgctgcagctgttcatggactagtatttcct
atatttggtctccttttctcatcagccattaaatcattctatgatcccncaagtaagctt
ttaaagaattccagggcatgggcacttagttacgtcggattaggtgtggttactctaatt
atcggaccggcacagaatttcttcttcggcattgcaggtggaaaacttattgaaagaatt
cgttccatgatgtttgagaaggtagtccaccaaaatatcggttggttcgacgatcctgcg
aattctagcggcgccatcggagctagattgtcaactgatgcatcaactgtaagaaatcta
gttggcgatagcttggccctgattgtacaaaatttagctactatcatagcaggattagtc
atagcatttactgctaactggattttggcgatcgcaatcctagccgccatgccatttaca
ttaattcaaggatacttgcagaccaaatttctgaagggattcagtgctgatgcaaagttg
aagtatgaagaagcaagccaagtagccaatggtgctgttggaggtatcagaactgttgca
tctttttgttcggaacagagggtgatggatttgtatcaacagaaatgcgaagcccccatg
aaacagggagttcgtctcggacttgtaagcggtaccgggttcggattctctttctttgcc
ttgtattgcacaaatgccttctgtttctaccttggagccatacttgtgaagcatgggaaa
gcaaaatttgatgaggtattcaaggttttcttcgcattgacaatctcagccatcggtgtt
tcacaaaccagtgccttggctcctgacaccaataaagccaaggattcagcagcttcgata
ttcgacattcttgatagaaaacctcctatcgactcgagcagcgaggatggcttaacaatt
cccacagtaacaggcaatattgagttagaacatgtcagcttcaagtatccgactcgacca
gacattcaaatattcaaagacctgtgtctcacaatacctaatgggaagactgttgcactt
gttggagagagtggcagtgggaagtcaactgtcattagcctcatcttaagattttatgat
ccaaactcaggtagtgttntattggatggcaccgatatcagaaagttaagattaagctgg
ctgcggcaacagatgggattggttagccaagagccaatactcttcaaagagaccatccgt
accaacatagcttacggcaaacagggaaatgcaaccgaagaagagatcgtggcagcaaca
aaagcagcgaatgcgcacacctttatcagctcattgccgcagggttacgagacctcagtt
ggagaacgaggagttcagttgtctggagggcaaaagcaacggattgccattgcgagagcc
atattgaagaaccccaggatccttctgcttgacgaggcaacaagtgctctagatgcagaa
tcggaacgtgtggtacaggaggcattggatgcagtaatggtgaaccaaacaactgtcgta
gttgctcaccgccttagcactataaagggcgctgatattattgcagtcgtgaaaaacgga
gccatcgttgagaaaggaggacacgatgcattgatgaatattactgatggggcttatgcc
tccttggtagcacttcacttaaacacttcaacgtga
DBGET
integrated database retrieval system
