Herbaspirillum seropedicae Z67: ACP92_23805
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Entry
ACP92_23805 CDS
T04519
Name
(GenBank) bifunctional tRNA (mnm(5)s(2)U34)-methyltransferase/FAD-dependent cmnm(5)s(2)U34 oxidoreductase
KO
K15461
tRNA 5-methylaminomethyl-2-thiouridine biosynthesis bifunctional protein [EC:
2.1.1.61
1.5.-.-]
Organism
hsz
Herbaspirillum seropedicae Z67
Brite
KEGG Orthology (KO) [BR:
hsz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
hsz03016
]
ACP92_23805
Enzymes [BR:
hsz01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.61 tRNA 5-(aminomethyl)-2-thiouridylate-methyltransferase
ACP92_23805
Transfer RNA biogenesis [BR:
hsz03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
ACP92_23805
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DAO
Methyltransf_30
NAD_binding_8
Pyr_redox_2
NAD_binding_9
HI0933_like
FAD_binding_2
Lycopene_cycl
GIDA
Pyr_redox
FAD_binding_3
AlaDh_PNT_C
TrkA_N
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
AKN67976
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Position
complement(5455468..5457345)
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AA seq
625 aa
AA seq
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MPARPLQLASSELLAAWRADAAQHQRVLALPPDCLREQQAATVLDLHFALGQNFFATWRA
FDELRGQGGAQRLHYVAILPHPPAPHELIDDLSYAQALRAAWPLPLPGTHRLLLDEGRIT
LTLVWGALEEELARLEAPVDLFYLHAHAQAFDPDAPAWQAPACKRLARLAWTGAQAVVLG
GAGRDDLQAALRQVGFAGQSREGALHLRYAPGWARPPSHVATRETPLLRYPQANRHAIVI
GAGLAGTAAAERLSARGWRIDLIDAGPEPATRASGNHAGLFMPALARDDSPLARLTRAAF
LFAAQRWQALGGVGMEEGAAILGECCGILQFGRDAKQAQSFEQGAREWDYPARYARWMSA
QETADALGMPTMGGGYFFPEAGWLNPPSVCRRMLAVARQSNLVHSHFGCTVHRLQREGGQ
WQALDQAGESIAQAPVVILAAGAQASALPIAAALPLNAVRGQVTHLPAEGFPRLPFALCG
DGYLTRAHGGLVCMGATYDRFQDPALRVDSHAENLGRLQHMLPQIATHTHLPPASAPSLQ
GRVGQRCIAPDRLPLVGALPGQAGLYGLLGYASRGLIWAPLMAELLAAMLEREPLPLPRD
LVAALDPARFGTTAASDLELPAELE
NT seq
1878 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcccgtccgctccaacttgcctcttccgaactgctggccgcctggcgcgccgac
gctgcgcaacatcagcgcgtgctggcgctgcctccggactgcctgcgcgagcagcaggcg
gccacggtgctggacctgcacttcgccctgggacagaacttcttcgctacctggcgcgcc
tttgacgaactgcgcgggcagggcggcgcacagcgcctgcattacgtggcgatcctgccg
catccgccagccccgcacgagctgatcgacgatttaagttatgcacaggccttgcgcgcc
gcctggcccttgcccttgccgggcacgcaccgcctgctgctcgatgagggccgcatcacg
ctgaccctggtgtggggcgcgctggaagaagaactggcgcggctggaagcgccggtggac
ctgttctatctgcatgcccacgcccaggccttcgaccccgatgcgcccgcctggcaggcc
ccggcctgcaagcgcctggcgcgcctggcctggaccggggcgcaggccgtagtgctgggt
ggcgccgggcgtgatgacctgcaggcagcgttgcgccaggtcgggtttgccggtcagtcc
cgcgagggcgcgttgcacctgcgctatgcccccggctgggcgcgtccgccttcgcacgtg
gccacacgggagacgcccttgttgcgttatccacaggccaatcgccacgccatcgtgatc
ggcgccggcctggccggcaccgctgctgccgagcgcctgagtgcgcggggctggcgtatc
gacctgatcgacgccggcccagaaccggccacgcgcgcctcaggcaaccacgccgggctg
ttcatgcccgcgctggcgcgggacgacagcccgctggcgcgcctgacgcgagcggccttc
ctgtttgcggcgcagcgctggcaggcgctgggcggggtggggatggaagagggcgcggcc
attcttggggaatgctgcggcatcctgcagttcggccgcgacgccaagcaggcccagtcc
tttgaacagggcgcgcgcgagtgggattatccggcccgctatgcgcgctggatgtcggcg
caggagacggcggatgcgctgggcatgcccaccatgggcggcggctatttcttccccgag
gcgggctggctcaatccgccctcggtgtgccggcgcatgctggccgtcgccaggcaaagc
aatcttgtccacagccatttcggctgcaccgtccatcggctgcaacgggaaggggggcaa
tggcaggcgctggaccaggccggcgagtccatcgcccaggctcccgtggtgatcctggcg
gcaggcgcgcaggccagcgccttgccgatagcagcagcgctgcccctgaacgccgtgcgc
ggccaggtcacgcatctgccggcagaaggctttccgcgcctgcccttcgccttgtgcggc
gatggctatctgacccgcgcccatggcggcctggtctgcatgggcgcgacctatgaccgt
ttccaggaccccgccttgcgcgtggacagccatgccgagaacctgggacgcctgcagcac
atgctgccgcagatcgccacccacacgcacttgccgccagccagcgcgcccagcctgcaa
ggccgtgtcggccagcgctgcatcgccccggaccgcttgccgctggtgggcgcgctgcct
ggccaagcgggcctgtatggcctgctgggctatgcctcgcgcggcctgatctgggcgccg
ctgatggccgaattgctggccgccatgctggagcgcgaaccgctgcccttgccgcgcgac
ctggtcgccgcgctcgatcctgcgcgcttcgggaccacggcggcgtcagacctcgagcta
cccgccgagctggaatga
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