Hymenobacter taeanensis: HMJ29_05870
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Entry
HMJ29_05870 CDS
T08050
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
hts
Hymenobacter taeanensis
Brite
KEGG Orthology (KO) [BR:
hts00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
hts03009
]
HMJ29_05870 (rimO)
Enzymes [BR:
hts01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
HMJ29_05870 (rimO)
Ribosome biogenesis [BR:
hts03009
]
Prokaryotic type
ribosomal protein modification factors
HMJ29_05870 (rimO)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM_2
TRAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
QJX46487
UniProt:
A0A6M6BE43
LinkDB
All DBs
Position
complement(1376545..1377858)
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AA seq
437 aa
AA seq
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MKVRSQQANKVNVITLGCSKNIVDSEVLMGQLRANQFEVTHEAEQSDANIVIINTCGFID
NAKQESIDTILRYADEKEAGRLEKLYVTGCLSQRYKDDLEQEIPQVDAYFGTLELPQLMK
KLEADYKHELIGERLLTTPSHYAYFKIAEGCNRPCSFCAIPLMRGKHQDRPIEDLVKEAK
RLASMGTKELILIAQDLTYYGLQHYGERKLADLLRNLSDVNGIDWIRMQYAYPSQFPLDA
LDVMNERDNICKYLDMPLQHISDNMLKTMRRGISKRRTVELVDTIRQRVPSIALRTTLIA
GHPGETQQDFEDLYNFVDETRFDRLGIFTYSHEDNTHSYTLEDNVPAEVKQDRADQIMEL
QQGISMELNEQKVGMTYKVLFDRKESGYFVGRTEFDSPEVDNEVLVPATKDTFVRLGDFA
QVQITEASDFDLYGKLI
NT seq
1314 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttagaagccagcaggccaataaagtcaacgttattactcttggttgctccaaa
aacatcgtcgattcggaggtgctgatggggcagttgcgcgccaaccagtttgaggtgacg
cacgaagcagagcagagcgacgccaacatcgtcattattaatacctgcggttttattgat
aacgccaagcaggaaagcatcgataccattctgcgctatgccgatgagaaggaagccggc
cgcttggagaagctttacgtaacgggctgcctctctcagcgctataaggacgacctggag
caggagattccgcaggtagatgcctacttcggtacgctggagctgccccagctgatgaaa
aagctggaggctgattataagcatgagctaattggggagcgcctcctgactactccttcg
cactacgcttacttcaagattgcagagggctgtaaccgtccttgctcgttctgcgccatc
ccgctcatgcgcggtaagcaccaagatcggcccattgaggatctggtaaaggaagcaaag
cgcctagccagtatgggcaccaaagagctcatcctgattgcccaggacctgacctactat
ggcctgcagcactacggcgagcgaaaactggccgacctgctgcgcaacctctccgacgta
aacggcatcgactggatccggatgcagtacgcttatccctcgcagttcccactggatgcg
ctggacgtgatgaacgagcgcgacaacatctgcaagtacctggatatgcccctgcagcat
atttctgataacatgctgaaaaccatgcgccgcggcatcagcaagcgccgcaccgtggag
ctggtggataccatccgccagcgcgtgcccagcattgcgcttcgcactacactcattgcc
ggccaccccggcgagacccagcaggacttcgaagacctctacaactttgtggatgaaacc
cgcttcgaccgcctcggcatcttcacttactcgcacgaggacaacacgcactcttacacg
ctcgaggataatgtgcccgccgaagtaaagcaagaccgcgccgaccagatcatggagctg
cagcagggcatttctatggagctgaatgagcagaaggtaggcatgacctataaagtgctc
tttgaccgtaaggaaagcggttattttgtgggccgcactgagttcgactcaccggaggta
gacaacgaagtgctggtgcccgctactaaagacacgtttgtgcgcctcggcgacttcgcc
caggtgcaaatcacggaggcttcggacttcgatttgtatggcaagctgatttaa
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