Humibacter sp. BT305: DVJ78_05880
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Entry
DVJ78_05880 CDS
T05558
Name
(GenBank) extradiol ring-cleavage dioxygenase
KO
K04101
protocatechuate 4,5-dioxygenase, beta chain [EC:
1.13.11.8
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00362
Benzoate degradation
hum00627
Aminobenzoate degradation
hum01100
Metabolic pathways
hum01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
DVJ78_05880
00627 Aminobenzoate degradation
DVJ78_05880
00624 Polycyclic aromatic hydrocarbon degradation
DVJ78_05880
Enzymes [BR:
hum01000
]
1. Oxidoreductases
1.13 Acting on single donors with incorporation of molecular oxygen (oxygenases)
1.13.11 With incorporation of two atoms of oxygen
1.13.11.8 protocatechuate 4,5-dioxygenase
DVJ78_05880
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Motif
Pfam:
LigB
Motif
Other DBs
NCBI-ProteinID:
AXH35004
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Position
complement(1231581..1232462)
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AA seq
293 aa
AA seq
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MATLSAVLATTHHPFFLKATELTPPEEQMPQAPEWKRKVEAYRETLTAAEPDILVMVGAD
HFHQFFHDNYPTFLIGKQPTYDATYYNEEREFSIPRYVLDGHEELSGFMLQGLLDRGFDF
SVSHELKLDHSIICPIITTRPDGDLPVVPIYTNIFAPPLPSPKRFWDLGRAIREIIDEYP
SDKRIAAVGSGHLSLELGGPRQFGETGPDPVFDRQAIEWLSNGDIDSILANVTHESMSGS
GNATHGFMDLILMMGIAGPEKAAYVDDLDLFHTMEAYFTWYPSGDPRERTASR
NT seq
882 nt
NT seq
+upstream
nt +downstream
nt
atggcgacactgagtgcggtcctcgcgaccacgcaccacccgttcttcctcaaggcgacc
gagctgacgccgcccgaggagcagatgccgcaggccccggagtggaagcgcaaggtcgag
gcctaccgcgagacgctcaccgcggccgagcccgacatcctggtgatggtcggcgccgac
cacttccaccagttcttccacgacaactacccgacgttcctcatcgggaagcagccgacg
tacgacgccacgtactacaacgaggagcgcgagttcagcatcccgcggtacgtgctcgac
gggcacgaggagctgtcgggcttcatgctgcagggactgctcgaccggggcttcgacttc
tcggtcagccacgagctgaagctcgaccactcgatcatctgccccatcatcaccacacga
ccggacggcgacctgccggtggtgccgatctacacgaacatcttcgcgccgccgctgccg
agtccgaagcggttctgggacctcggccgggccatccgcgagatcatcgacgagtacccc
tccgacaagcggatcgccgcggtcgggagcgggcacctctcgctcgagctcggcggaccc
cgtcagttcggcgagaccgggccggacccggtgttcgaccgtcaggccatcgagtggctc
tcgaacggcgacatcgacagcatcctcgcgaacgtcacgcacgagtcgatgagcggatcg
ggcaacgcgacccacgggttcatggacctcatcctgatgatggggatcgcgggaccggag
aaggccgcgtacgtcgacgacctcgacctcttccacaccatggaggcctacttcacctgg
tatccgtcgggcgatccgcgggagaggacggcatcgcgatga
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