Humibacter sp. BT305: DVJ78_15830
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Entry
DVJ78_15830 CDS
T05558
Name
(GenBank) ADP-forming succinate--CoA ligase subunit beta
KO
K01903
succinyl-CoA synthetase beta subunit [EC:
6.2.1.5
]
Organism
hum
Humibacter sp. BT305
Pathway
hum00020
Citrate cycle (TCA cycle)
hum00640
Propanoate metabolism
hum00660
C5-Branched dibasic acid metabolism
hum01100
Metabolic pathways
hum01110
Biosynthesis of secondary metabolites
hum01120
Microbial metabolism in diverse environments
hum01200
Carbon metabolism
Module
hum_M00009
Citrate cycle (TCA cycle, Krebs cycle)
hum_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
Brite
KEGG Orthology (KO) [BR:
hum00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
DVJ78_15830
00640 Propanoate metabolism
DVJ78_15830
00660 C5-Branched dibasic acid metabolism
DVJ78_15830
Enzymes [BR:
hum01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.5 succinate---CoA ligase (ADP-forming)
DVJ78_15830
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Motif
Pfam:
ATP-grasp_2
Ligase_CoA
ATP-grasp_5
GARS_A
CPSase_L_D2
ATP-grasp
Motif
Other DBs
NCBI-ProteinID:
AXH36683
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Position
complement(3331796..3332965)
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AA seq
389 aa
AA seq
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MDLFEYQARDLFESYGVPVLPGIVADTPEEVKAAAEKLGGVTVVKAQVKVGGRGKAGGVK
VAKDPAAAEEAAKAILGLDIKGHAVHRVMVAGGARIAQEFYFSVLLDRANRSYLSLTSYE
GGMEIEQLAVERPEALARIEVDPLAGIDLETAKAIAVQAKFPEELVEKVAPVFVKLWEVY
KGEDATLVEVNPLVLTEEGDIIALDGKVSLDENASFRHPNHEALEDKDAADPLEAKAKAN
DLNYVKLDGEVGIIGNGAGLVMSTLDVVAYAGERHGGVKPANFLDIGGGASAQVMANGLD
VILGDEQVKSVFVNVFGGITACDAVANGIVAALGILGDTATKPLVVRLDGNRVEEGRRIL
EEAAHPLVTLAATMDDGADKAAELAAAAK
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
gtggatctattcgagtaccaggcccgggacctcttcgagagctacggtgtccccgtcctg
cccggcatcgtcgccgacacgcctgaagaggtgaaggccgccgccgagaagctcggcggc
gtgaccgtggtcaaggcgcaggtcaaggtgggaggccgcggcaaggccggcggcgtcaag
gtcgccaaggacccggccgccgccgaggaggccgcgaaggcgatcctcggtctcgacatc
aagggacacgcggtgcaccgcgtgatggtggccggtggcgcccgcatcgcgcaggagttc
tacttctcggtgctcctcgaccgggcgaaccgctcgtacctctcgctgaccagctacgag
ggcggcatggagatcgagcagctcgcggtcgagcgtccggaggcgctggcgcgcatcgag
gtcgaccccctggccggcatcgacctcgaaacggcgaaggcgatcgccgtccaggcgaag
ttccccgaggagctcgtcgagaaggtcgcccccgtcttcgtgaagctgtgggaggtctac
aagggcgaggacgcgaccctcgtggaggtcaacccgctcgtgctcaccgaggagggcgac
atcatcgccctcgacggcaaggtcagcctcgacgagaacgcctccttccgtcacccgaac
cacgaggcgctcgaggacaaggacgcggccgacccgctggaggccaaggccaaggcgaat
gacctcaactacgtcaagctcgacggcgaggtcggcatcatcggcaacggcgcgggcctc
gtcatgtcgacgctcgacgtcgtcgcctacgccggcgagcgccacggcggggtcaagccc
gccaacttcctcgacatcggcggcggcgcgtccgcccaggtgatggcgaacggtctcgac
gtgatcctcggcgacgagcaggtcaagagcgtcttcgtcaacgtcttcggaggcatcacc
gcctgcgacgccgtggccaacggcatcgtcgcggccctcggcatcctgggcgacaccgcc
acgaagccgctcgtggtccgcctcgacggcaaccgcgtggaggaaggccgccgcatcctc
gaggaggccgcgcatccgctggtcaccctcgcggcgaccatggacgacggtgcagacaag
gccgcagagctcgcggcagcggcgaagtaa
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