Haloferax volcanii: HVO_1899
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Entry
HVO_1899 CDS
T01200
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hvo
Haloferax volcanii
Pathway
hvo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HVO_1899 (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvo03021
]
HVO_1899 (rpoE1)
Enzymes [BR:
hvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HVO_1899 (rpoE1)
Transcription machinery [BR:
hvo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HVO_1899 (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHS2_Rpb7-N
S1
Motif
Other DBs
NCBI-ProteinID:
ADE02934
UniProt:
D4GTD2
LinkDB
All DBs
Position
complement(1748221..1748793)
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AA seq
190 aa
AA seq
DB search
MYKRVRLKDTVEVPPRHLGDVTPERVKRLLQDKLEGRMDEDVGSVVSVVNVNDIGEGTVL
PNRPGVYYEADFDAITYDPDMQEVVDGIVVEVVEFGAFVGIGPVDGLLHVSQISDEYLAY
DGENQQLASTESNQTLAVDDEVRARIVTKSIDERNPRDSKIGLTAKQPGLGKHGWLESKR
QQSEASAEGN
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgtacaaacgggtacgactcaaagatacagtcgaagtcccaccccgacacctgggcgac
gtgacgcccgagcgggtcaagcgactgttgcaggacaagttggaaggacggatggatgag
gacgtggggagcgtcgtgagcgtcgtgaacgtcaacgacatcggcgagggcaccgtgctg
cccaaccgccccggcgtctactacgaggccgacttcgacgccatcacctacgaccccgac
atgcaggaggtcgtcgacggcatcgtggtcgaagtcgtcgagttcggtgccttcgtcggc
atcggcccggtcgacgggctgctgcacgtctcgcagatatccgacgaatacctcgcctac
gacggcgagaaccaacagctcgcgtcgaccgaatccaaccagacgctcgccgtcgacgac
gaggttcgcgctcgcatcgtcaccaagagcatcgacgagcgcaacccgcgcgactcgaag
atcggcctcacggccaaacagccggggctcggcaagcacggctggctcgaatcgaagcgc
cagcagagcgaggcctcggcggagggtaactga
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