Haloferax volcanii: HVO_2781
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Entry
HVO_2781 CDS
T01200
Symbol
rpoD
Name
(GenBank) DNA-directed RNA polymerase subunit D
KO
K03047
DNA-directed RNA polymerase subunit D [EC:
2.7.7.6
]
Organism
hvo
Haloferax volcanii
Pathway
hvo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hvo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HVO_2781 (rpoD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hvo03021
]
HVO_2781 (rpoD)
Enzymes [BR:
hvo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HVO_2781 (rpoD)
Transcription machinery [BR:
hvo03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HVO_2781 (rpoD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
DUF4198
Motif
Other DBs
NCBI-ProteinID:
ADE03695
UniProt:
D4GWY4
LinkDB
All DBs
Position
complement(2618061..2618840)
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AA seq
259 aa
AA seq
DB search
MVNDFQVEFIEREDRRARFVARGLTPALANGIRRAMVADVPTFSIDTVRFVENTSVMFDE
MIGLRLGLVPLTTPLDDFEPGDTVTVALEVDGPATAYSGDIESADDMVVPADENIPIIEL
KEGQRLEFEADAVLGHGKDHAKNQGGVAVGYRHLQRVEVVGDAGEFDEQEPNILRGVIEE
AAAEHAEGDAEDGDLVATETFGNDLTERYPGKEVEVHDVPGAFVFSVETDGSFDVDELVT
RAVASLGDRAAELEEKVAL
NT seq
780 nt
NT seq
+upstream
nt +downstream
nt
atggtaaacgacttccaggtcgagttcatcgaacgcgaagaccgacgcgcccgtttcgtc
gcgcgcggtctgaccccggcgctagccaacggcattcgccgggcgatggtcgccgacgtg
ccgacgttctccatcgacaccgttcggttcgtggagaacacctcggtcatgttcgacgag
atgatcgggcttcgtctcggtctggttccgttgaccacgcctctcgacgacttcgaaccc
ggtgacaccgtcaccgtcgcgctcgaagtcgacgggccggcaaccgcctactccggggat
atcgaatccgcggacgacatggtcgtcccggcggacgagaacatccccatcatcgagctg
aaggagggccagcgcctcgagttcgaggccgacgccgtcctcggccacggaaaagaccac
gccaagaaccaaggcggggtcgccgtcggctaccgacacctccagcgcgtggaggtcgtc
ggcgacgccggcgagttcgatgaacaggagccgaacatcctccgcggcgtcatcgaagag
gccgcggcggaacacgccgagggggacgccgaagacggcgacctcgtcgcgacggagacg
ttcggcaacgacctgacggagcggtaccccgggaaagaggtcgaagtacacgacgtgccc
ggcgcgttcgtcttcagtgtggagacggacgggtcgttcgacgtcgacgagctcgtgacg
cgcgccgtcgcctccttgggtgaccgcgcggccgaactcgaagagaaggtcgcactgtaa
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