Haloquadratum walsbyi DSM 16790: HQ_1337A
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Entry
HQ_1337A CDS
T00375
Symbol
rpoE1
Name
(GenBank) DNA-directed RNA polymerase subunit E
KO
K03049
DNA-directed RNA polymerase subunit E' [EC:
2.7.7.6
]
Organism
hwa
Haloquadratum walsbyi DSM 16790
Pathway
hwa03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
hwa00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HQ_1337A (rpoE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
hwa03021
]
HQ_1337A (rpoE1)
Enzymes [BR:
hwa01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HQ_1337A (rpoE1)
Transcription machinery [BR:
hwa03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
HQ_1337A (rpoE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
SHS2_Rpb7-N
S1_2
Motif
Other DBs
NCBI-ProteinID:
CAJ51465
UniProt:
Q18KI4
LinkDB
All DBs
Position
432719..433303
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AA seq
194 aa
AA seq
DB search
MYKRVQLTDTVEVPPRHLADVTPQRVKRLLQDKLEGRMDEDIGSVVSVISVLDIGEGAVL
PGRAGVYYEAKFDAITFDPAMQEVVDGEVVEVVEFGAFVGIGPVDGLLHVSQISDEYLAY
DGENQQLASTESNRTLGVGDSVRVRVVTKSIDERNPRDSKIGLTAKQPGLGKHGWLQADR
QANAATTEAGAEGK
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgtataaacgggtacaacttacagatacagttgaagtgcctccgcggcaccttgcagat
gtcacaccacagcgtgttaagcgacttctacaagacaaattagagggacggatggatgaa
gatattggaagcgttgttagcgtcatcagcgttcttgatattggtgaaggcgcagtcctt
ccagggcgtgctggtgtatactacgaagccaaattcgatgcaattacattcgacccagca
atgcaggaggtcgttgatggtgaagtcgttgaagttgttgaatttggggcatttgttgga
attggtccggttgatgggttgttgcacgtctcacaaatttccgatgagtaccttgcatac
gacggtgaaaatcagcaacttgcgtccacagagtcaaatcggacgcttggtgttggtgac
tctgtgcgtgttcgcgttgtgacaaaaagtattgatgagcgaaatccccgtgattcaaaa
ataggtcttaccgcgaaacaacctggtcttggtaagcatggctggttgcaagcggaccga
caggccaacgctgctacgacggaggccggcgcggagggtaagtag
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